Dtit047726.1
Basic Information
- Insect
- Dynastes tityus
- Gene Symbol
- -
- Assembly
- GCA_029618875.2
- Location
- JAROYD020000013.1:11050486-11061125[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0074 0.86 11.8 0.1 1 23 391 414 391 414 0.97 2 14 0.34 39 6.6 0.1 1 23 454 476 454 476 0.96 3 14 1.4 1.6e+02 4.7 0.6 1 23 509 533 509 533 0.93 4 14 0.0011 0.13 14.4 4.6 1 23 536 559 536 559 0.96 5 14 0.037 4.4 9.6 3.8 2 23 566 588 565 588 0.94 6 14 0.025 2.9 10.1 4.0 1 21 693 713 693 714 0.95 7 14 0.0011 0.13 14.3 2.2 2 23 726 748 725 748 0.94 8 14 0.059 6.9 9.0 2.1 1 23 751 774 751 774 0.96 9 14 7 8.2e+02 2.4 0.2 1 23 804 827 804 827 0.93 10 14 0.98 1.1e+02 5.1 0.4 2 23 834 856 833 856 0.94 11 14 0.14 16 7.8 1.0 2 23 865 887 864 887 0.95 12 14 0.0041 0.48 12.6 0.2 2 23 893 915 892 915 0.95 13 14 1 1.2e+02 5.0 0.2 2 23 1103 1125 1102 1125 0.93 14 14 0.43 50 6.2 0.9 1 23 1138 1160 1138 1160 0.96
Sequence Information
- Coding Sequence
- ATGGAAACGAAACTCTGCAGAATATGTGGAAAATTTACCGATAACCACTTGAACATATTCAAAACAGAAgggttgaaaataaaattggaaacCTGTCTTCCGATAATCGTTTCTCAGCATTGTCTTCTACCCGACACTATATGTAAAGAATGTACGGAGAATGTTGAAAACTTCTATGCGTTCATCAAAAATTGTCTTGAAAATTTAATCATATTAGAGTCGCAGTATGATATACACGAATCCTGTTTGAAAAGCAAGCGAAAATTCGAAAAAGGTACTACCGTCGATAGAATTACAAAGACTGAAAAAGGTATTCAAACCGACGAGATTAATTTCATAGATTCGTACAAAGagtcaatattaaattttccaaaGACATTAGAAGAGGCAGAAAAGACTTTGAACGAAAACCATGTCGATTACGCAAAGTATTTCCCGAAAACGTTCGATAAAGATCATCGAGTAAATTTGGTTAGTTACGATGTGTCAGACGAATCAAATTCCGACAATGAAGACTCAAATGCATTTACGGTTCCAATTAAGGTAGCGTTTGCAAGCAGCAGCGGTGAGAATAGGACCTCCGTACAAGGTGTAGATGTCGATAATTTCCTTatcaacaaacaatattttgacaatcaagaaaatcgacTGATAAACGAAATTACGCAGaggttaaacaaaaaaagaaaatgtgatGAAATATTGCCTTATCGAacgaaaatatgcaaatacgaCTTTAATAACCGACGAAAGAATAGACAGCCTAAGAAAATCAGCAATAAAAGTATAGAGGAGGtacctttttttaataagtggAATCAAGACATCGTGAACAGTGTAGAAATTATCGGTGCGACAAGTGATAAGGTGTCAGGTGGAACGAGGCAGGAAGAACGGCTTGAAAAtGCGAATACCATCCAAAATCTACCGCAGGTATGCCTATTGTGCGAATCCCAGTTCCCGACGCCCGCGGAACTGGCAGGTCACGTGTTCGAGACGCACGGTATCGACATGGCACAGATCCTCGCCTCGGAACCTATCttggaaaagaagaagaaaataccAAACTTGGTAAAGATCGCCGATTTGAAGAACAAAAGTGAGATCTCAGAACCACCGCTTCCAATCAACATGGACATCACGGAAGAACCCCCAACGTTGCAACCAAGTTACGCGTGTCCAATATGCCCAGCCTTACTAACGAACAAAACTGATCTCTATACCCATCTCCGTGTCAAACACGCCAAGCAAGCATCCTTAACCTGCGGACTATGTACTCAACTCTGCAACTCATGCATTTCCTTATCGTCCCACCTAGAAACCTGCACGAAACAACACCCGTTAACCTCTTCATCCAAATACATTTGCAAGGTTTGTCAATACAGCGATGACAACTCGAAAGCCCTTGAAAATCACATCGTAGTCCACGATTTCATCCTCCAATATTGTCGGAAGCAATCTAAGATCTTCGATCCAAGTGATTACATCGACCTAAACCCTAATTCCGAGAGCACACCGAAGATTTACACATGTAACGAATGTACTGAAGGAGTCTTTGATGATTTCAAAGAGTTTAGCGCCCACCGCAGATCTCAACATCAGATCTTCCATTGCGATCTCTGTAATAAGTTCTATGGTAGGAATTCTCACTTATGGAAGCATGTGAATCGATTGCACAAGGGTCATCCAAGCATCACCTGCCAGTTATGTCACAAAACGAGTGCTTCGAAGTATCATCTGGCGCAGCATTTTAGCAAGATTCATAGTGCGAAGCTGTTCAATTCCAAACCGGATCCTACGAATGAATACGAAGACTTTATGAAGCAGAAATTCCAGGGTTTCGATTTCCAGTCGGTGAAGCAGAGTTTTATGCGACAGGAAATGTTGAAACAGGAGCAGAAGGATTCGTTTAGTGAGGAGATTTCGGATCAGGAAGAGGAGAATGAGAAAGGGGATGACGATGAAAAGAATTCAGAAaaGGGAAAAGAACAGAACCCACCAAAAGAAATCGATTCATCGTCCAATCTCTACACCAACATCATAACCAACTACACCCCGCCACAAAACAACGGCGAATTCAAGTGCCCGAAATGTCTCAAAGGATTCCACAAGAAGAATCTCCTTAAAAAGCACAAAAAGAATTGCAGGCCTCGCTTACAAAAAGATCTCCTCACCCGCTGTAAAACCTGTTCGCGAATCTTCAAAGACAGACAAAGCTTGACCAAACATCTCATCAATTACCATTCGGAATACGTTTGTGAGATATGCAGTCAGAAATTCCAAAGTAAATGTGAAATCGTCTCACACATCCGGTTCACGCATCCGAACTGCCATCTGTTCTGTTCTTGCGGGAACATCTTGAGAAATAAGGAAGATCTAAGGTTGCATAAGCAGGATCATTGGAACTCCTTCATCTGCCAGTTCTGCGCTGATAGTTTGCCTACCAAGATTAAGCTGAAGATGCATATTTTGAGCTTACATCGGAAGATCTTGAGCTTGAGTTGTGGGATCTgtttgaaattgtttgaaacTCAACATATATTGAGGGATCACGTTCGATTAGTGCATAAGGAACACCTCTTACCACTTACTTCTTGCACAGTCTGCGGTAAAAACTACGGTTCCAAATGGAAAACATTCGACCACCTCAATAAATCCCACGGTAGAATCTTCAAACCTTGCAAGGTCTGCTTGGAAGTGTTCGATTCCGAAGAACAGCTCCAGAAACACTACGATACCATGCACATAACATTCTCCCAATCGAAAAGCTCCATCCAGAATACCCCTTCGAACGAATTCGGTAACATCAAGAAGGAACTCTGCGAAAGCGACTTCGAGCACAACTACGAAAACGAAGATAAGAACAGTAACAGTGATGTGGAGGATGCTGAAAATTATCCCGGTTACCAAAACATGACCCAAAGCGATTACGATGAGAGAACCACAGGATCTAAGATGGATTACCCCAACGCGATAGACGACAGCAAGATTTCACTGCTAGAAAAAAGGTTGCTGGGGAAAAAGTTATCACCCGAAGATCAAAAGAAATCCTCTAAGAAGATTAAGAATGATAAAAAGATGGAGACCAAATCTGAGTATTCCATGATCTTCCCAACGAATAATACCAAACAAAGGGAGTTTGATGATGCTGAAAGCAATCAGAGTCCTTTGCAGAACAGTTCGAAAAGAACAGTGTATGTCAACAGTAATGATCCTTCCCTTTGCGAAATCTGTTTGAAGACTTGGCCTGCTAAGAAGCATTTGTGGCAGCACTATATCCGATGCCATAAAACGGTTGCTGCTACTGTTTGCGGGATCTGTTTGAAGGCCAATGAAAGTTATGAAAGCTTGCAGAAACATCTGAGGGAGAATCATCCGACTTTGTTGCACGGGCAAGGATTTGGATCGAATTTCATCTGTCGGATATGTGGGagATATCACAACGCAAGCTCAAAGCTCAAATTACACATGGCAATACACGAGAATTTCGACTGGAAAATATTGGAATTCTTCGAGAACACCAAAACAGACCATTCCGAAATCAAAATTGAAAACACTATGGTAAACGGTTACGATGTAaaggaagaggaagaagaggagGACGAAGCAGAGGAAGGTAAACAGATACAACCTGAGATCAACTTCGAAAGCCTCATCGAGGAGGTAGAATGCAGCTCCGAGTCTGGGAACGAGAACGTTAATGATTCTGAAGATGACGATCAACACGGTCAAAACGAAGACACCTCAACCAGCGACCCTAGTGATTCTGATGACGTCTCTGAGGAAAACTCATTGGAATCTCAGATGCTCCAGAACATGCTCATCGAGAAGAATATGCTGCAAAAGCAAGTTGACGCGATCAAAAACAATAACGGCGGAACAACTTATAAGACTGAAACCCAGAACAAAATCATTCCGTACGATTCCGCCGAGAACGGACTCAAGCAGGAGACCTCTTCAGAAACCGAAGACTCCAATTCTTCCAGTACTGATCATGAGCATGAGAACGACGAGTGTAAGTCTGAGATTAAAAGCGAGAATGGTTCCTCGGAAGATGAAGATGAATCGCAGATCTCGATCGTGAGCGAGGACGATGAGGAAGAGGAAGAGAATCGGGACAATTCAAACGATTCCTCTAGAAATGTTTTTGAGAGAAAACCTGAGGAATTAGACTCTGCAATCAAATCCATTAGTTACGAAGAGGTGGATGTTAAAGATGAGCAGATTGGGGATCAATATTGTGAGTTGCAAGCACAAAATCTAAATCCGCATGAGATACAAAGTGCCGTTGATAGTATtctgtaa
- Protein Sequence
- METKLCRICGKFTDNHLNIFKTEGLKIKLETCLPIIVSQHCLLPDTICKECTENVENFYAFIKNCLENLIILESQYDIHESCLKSKRKFEKGTTVDRITKTEKGIQTDEINFIDSYKESILNFPKTLEEAEKTLNENHVDYAKYFPKTFDKDHRVNLVSYDVSDESNSDNEDSNAFTVPIKVAFASSSGENRTSVQGVDVDNFLINKQYFDNQENRLINEITQRLNKKRKCDEILPYRTKICKYDFNNRRKNRQPKKISNKSIEEVPFFNKWNQDIVNSVEIIGATSDKVSGGTRQEERLENANTIQNLPQVCLLCESQFPTPAELAGHVFETHGIDMAQILASEPILEKKKKIPNLVKIADLKNKSEISEPPLPINMDITEEPPTLQPSYACPICPALLTNKTDLYTHLRVKHAKQASLTCGLCTQLCNSCISLSSHLETCTKQHPLTSSSKYICKVCQYSDDNSKALENHIVVHDFILQYCRKQSKIFDPSDYIDLNPNSESTPKIYTCNECTEGVFDDFKEFSAHRRSQHQIFHCDLCNKFYGRNSHLWKHVNRLHKGHPSITCQLCHKTSASKYHLAQHFSKIHSAKLFNSKPDPTNEYEDFMKQKFQGFDFQSVKQSFMRQEMLKQEQKDSFSEEISDQEEENEKGDDDEKNSEKGKEQNPPKEIDSSSNLYTNIITNYTPPQNNGEFKCPKCLKGFHKKNLLKKHKKNCRPRLQKDLLTRCKTCSRIFKDRQSLTKHLINYHSEYVCEICSQKFQSKCEIVSHIRFTHPNCHLFCSCGNILRNKEDLRLHKQDHWNSFICQFCADSLPTKIKLKMHILSLHRKILSLSCGICLKLFETQHILRDHVRLVHKEHLLPLTSCTVCGKNYGSKWKTFDHLNKSHGRIFKPCKVCLEVFDSEEQLQKHYDTMHITFSQSKSSIQNTPSNEFGNIKKELCESDFEHNYENEDKNSNSDVEDAENYPGYQNMTQSDYDERTTGSKMDYPNAIDDSKISLLEKRLLGKKLSPEDQKKSSKKIKNDKKMETKSEYSMIFPTNNTKQREFDDAESNQSPLQNSSKRTVYVNSNDPSLCEICLKTWPAKKHLWQHYIRCHKTVAATVCGICLKANESYESLQKHLRENHPTLLHGQGFGSNFICRICGRYHNASSKLKLHMAIHENFDWKILEFFENTKTDHSEIKIENTMVNGYDVKEEEEEEDEAEEGKQIQPEINFESLIEEVECSSESGNENVNDSEDDDQHGQNEDTSTSDPSDSDDVSEENSLESQMLQNMLIEKNMLQKQVDAIKNNNGGTTYKTETQNKIIPYDSAENGLKQETSSETEDSNSSSTDHEHENDECKSEIKSENGSSEDEDESQISIVSEDDEEEEENRDNSNDSSRNVFERKPEELDSAIKSISYEEVDVKDEQIGDQYCELQAQNLNPHEIQSAVDSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253147;
- 90% Identity
- iTF_01121196;
- 80% Identity
- -