Basic Information

Insect: Dynastes hyllus
Gene Symbol: -
Assembly: GCA_029619255.2
Location: JAROYC020000003.1:1778260-1780266[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.7 2.2e+04 -2.9 0.0 36 45 260 269 250 271 0.68

2 15 0.54 1.7e+03 0.6 0.1 21 45 273 297 265 304 0.82

3 15 0.14 4.5e+02 2.4 0.0 20 31 300 311 284 325 0.82

4 15 0.01 33 6.1 0.0 22 46 330 354 325 359 0.90

5 15 0.98 3.2e+03 -0.3 0.0 22 45 358 381 355 386 0.84

6 15 0.05 1.6e+02 3.9 0.1 22 44 386 408 381 412 0.82

7 15 0.42 1.3e+03 0.9 0.1 21 37 413 429 408 440 0.73

8 15 0.042 1.4e+02 4.1 0.0 18 44 438 464 435 468 0.85

9 15 0.016 51 5.5 0.0 20 51 468 499 465 501 0.86

10 15 0.07 2.3e+02 3.4 0.0 21 47 497 523 493 529 0.77

11 15 0.78 2.5e+03 0.1 0.1 21 31 525 535 521 550 0.85

12 15 0.00041 1.3 10.6 0.1 20 47 552 579 548 585 0.86

13 15 0.43 1.4e+03 0.9 0.0 21 44 581 604 577 610 0.82

14 15 0.025 82 4.8 0.1 22 45 610 633 599 637 0.88

15 15 0.012 39 5.8 0.0 23 46 639 662 634 666 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.7	2.2e+04	-2.9	0.0	36	45	260	269	250	271	0.68
2	15	0.54	1.7e+03	0.6	0.1	21	45	273	297	265	304	0.82
3	15	0.14	4.5e+02	2.4	0.0	20	31	300	311	284	325	0.82
4	15	0.01	33	6.1	0.0	22	46	330	354	325	359	0.90
5	15	0.98	3.2e+03	-0.3	0.0	22	45	358	381	355	386	0.84
6	15	0.05	1.6e+02	3.9	0.1	22	44	386	408	381	412	0.82
7	15	0.42	1.3e+03	0.9	0.1	21	37	413	429	408	440	0.73
8	15	0.042	1.4e+02	4.1	0.0	18	44	438	464	435	468	0.85
9	15	0.016	51	5.5	0.0	20	51	468	499	465	501	0.86
10	15	0.07	2.3e+02	3.4	0.0	21	47	497	523	493	529	0.77
11	15	0.78	2.5e+03	0.1	0.1	21	31	525	535	521	550	0.85
12	15	0.00041	1.3	10.6	0.1	20	47	552	579	548	585	0.86
13	15	0.43	1.4e+03	0.9	0.0	21	44	581	604	577	610	0.82
14	15	0.025	82	4.8	0.1	22	45	610	633	599	637	0.88
15	15	0.012	39	5.8	0.0	23	46	639	662	634	666	0.89

Sequence Information

Coding Sequence: ATGGCCACAGAATATGAGGAGTTGCATGAACATTATGATAATAACTGTGAAGAATGTAACAGTGACgcagacattaaattagaagactTTGCAATTCAAACGGGAGATTCTCTTGATTCAAAAGCAGAGATATCTTTAATAAGCCACGACATTGTAGCGCAAGGTGTCTTATTAGACAatagtaaaattgaaaatataggCGAGCAATTAAGCGAAGATATTGGCGGTAATGAgaactttgaaaaatataatagtgatgcagacattaaattagaaaattgtatAGTTCAAACGGGAGATTTTCCTGATTCAAAAGCGGGGATATCTTTGGTAAGCGAAGACATCGTAGCACAAGGTGTCCTATTggacaatattaaaattgaaaatataggTGAGCAGTTAAGCAAAGATATTGACGGTAGTGAGAActgtgaaaaatataatagtgacgcagacattaaattagaagattgtATAGTACAAACAGAAAATTTTGCTAATTCAAAAATGCGGATATCTTCGATAAGCGATGACATCGTAGTGCAAGGTGCcttatcagaaaatattaaagtaaaaaatttgaagGACGAATGCAATGAAAGCTATAAACTCAAACATAAGCTAAAAGCTCGCAAGGTCTGTCACAATCTTGACAAGAATATTTGTTGTCCTAAATGTGGGAAATCGTTCGAGAAGAAGAGACTACGTTATCATATTAGGAAGATGCATCGGCTCAGTAAGGTTCACATCTGTAAATATTGCGGACGGACGTTTTGTTACAAGTTCAATCTGAAGAGACATATTAAAACGCATACCGGTGAACGGCCTTTTATTTGCGAAAtctgtaaaaagtcattttgtgAGAAGGATGGACTGAAGAAACATATTAgaacacacaccggtgaaaagccttttacttgtgaaATCTGTAAAAAGTCATTTGTTTGGAATTCTGGACTGATGGTGCATATGAAAACACACATTGGCGAAAGACCTTTTACTTGcaagatttgtaaaaagtcgtttACTCAAGAGTCTTCACTgaaaattcatattaaaatacatagcggtgaaaaactttttacttgcaaggtttgtaaaaagtcattttctcaGAAGACTGCACTGAAAATCCATATTAAAACACACACTGGTAAacagccttttacttgcgaaatcTGTAAAAAGCCATTTGTTTGGAATTGTGATCTGATGAGGCATATGAAAACACACACTGGTGAAAGACCTTTTACTTGCAaggtttgtaaaaagtcattttctcgAGAGACTTTACTgaaaattcatattaaaagaCACACCgatgaaaagccttttacttgcaaAGTCTGTAAGAAGTCATTTGTTTGGAATTGTGATCTGGCACGGCATATGAAAACACACACCAGTGAAAAgtcttttacttgcgagatttgtaagaAGTCATTTTGTGAGAAGGATGTGTTGAGGAAACATATGAGaatacacaccggtgaaaagccttttacttgcaagatttgtaaaaagtcattttctctGGAGACTTCACTgaaaattcatattaaaatacacaccggtgaaaagcctttcaCTTGCGAAGTCTGTAAGAagtcattttcttggaagttcAAACTGATGGgtcatattaaaatacacagcagtgaaaagccttttacttgcgagatttgtaaaaagtcattttgtgTGAAGGATAGACTGAGGAGACATATGAAAACACACagcggtgaaaagccttttacttgtgagacttgtaaaatgtcattttgtatgaaagATGGACTGAATCGTCATATGATAAAACACATCGGTGAAAAGCGttttacttgcgaagtttgtaaagCGTCTTTTAATCGGTCGTTGTTACTAGAAAGACATATGGCAGTGCATATGGGGGATTGCCCTTATTCTTGTGGGTTGTGTTCCGCGAAATTTAGGAGTTCACAAAGTCTAAAATGGCATATGAAAGTGCATATTAAAAAGGAAGTTTAA
Protein Sequence: MATEYEELHEHYDNNCEECNSDADIKLEDFAIQTGDSLDSKAEISLISHDIVAQGVLLDNSKIENIGEQLSEDIGGNENFEKYNSDADIKLENCIVQTGDFPDSKAGISLVSEDIVAQGVLLDNIKIENIGEQLSKDIDGSENCEKYNSDADIKLEDCIVQTENFANSKMRISSISDDIVVQGALSENIKVKNLKDECNESYKLKHKLKARKVCHNLDKNICCPKCGKSFEKKRLRYHIRKMHRLSKVHICKYCGRTFCYKFNLKRHIKTHTGERPFICEICKKSFCEKDGLKKHIRTHTGEKPFTCEICKKSFVWNSGLMVHMKTHIGERPFTCKICKKSFTQESSLKIHIKIHSGEKLFTCKVCKKSFSQKTALKIHIKTHTGKQPFTCEICKKPFVWNCDLMRHMKTHTGERPFTCKVCKKSFSRETLLKIHIKRHTDEKPFTCKVCKKSFVWNCDLARHMKTHTSEKSFTCEICKKSFCEKDVLRKHMRIHTGEKPFTCKICKKSFSLETSLKIHIKIHTGEKPFTCEVCKKSFSWKFKLMGHIKIHSSEKPFTCEICKKSFCVKDRLRRHMKTHSGEKPFTCETCKMSFCMKDGLNRHMIKHIGEKRFTCEVCKASFNRSLLLERHMAVHMGDCPYSCGLCSAKFRSSQSLKWHMKVHIKKEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00626372;
90% Identity: iTF_00626372;
80% Identity: iTF_00626372;