Basic Information

Gene Symbol
Sub1
Assembly
GCA_029619255.2
Location
JAROYC020000006.1:12329185-12329659[+]

Transcription Factor Domain

TF Family
PC4
Domain
PC4 domain
PFAM
PF02229
TF Group
Unclassified Structure
Description
This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-27 6.4e-23 81.4 1.0 1 52 47 99 47 99 0.97

Sequence Information

Coding Sequence
ATGCCAAGGAATAAGCCAACCAAGAGAGACAGCTCTGATTCAGATTCTGGACCAGAGGATAGAACTCCAGCAAAGAAGTCCAAGCCAGCTCCACCACCCAAAAGCACATCTAGTCGCAATGATGATGGGGAACCTTCGTGGGACATAGGAAAAAATCGTTCAGTTAAGTTGTCTGAATTTAAAGGCAAGTGGTATGTGAATATTCGCGAGTACTACATGGCTGATAGCGGAGATTTGAGACCTGGTAAGAAGGGTATTATGTTAACTATGGAACAATGGCAGAAGTTCAAATCAATCGTTAGTGAAATTGATGAAGCCGTTAAGAAGTACGTGTGA
Protein Sequence
MPRNKPTKRDSSDSDSGPEDRTPAKKSKPAPPPKSTSSRNDDGEPSWDIGKNRSVKLSEFKGKWYVNIREYYMADSGDLRPGKKGIMLTMEQWQKFKSIVSEIDEAVKKYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00956321;
90% Identity
iTF_00956321;
80% Identity
iTF_00627221;