Dhyl035987.1
Basic Information
- Insect
- Dynastes hyllus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_029619255.2
- Location
- JAROYC020000011.1:88568-95471[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.068 3.3e+03 -1.5 2.7 29 80 16 71 6 82 0.55 2 3 0.17 8e+03 -2.8 0.1 58 81 115 136 95 144 0.71 3 3 3.6e-83 1.8e-78 265.3 21.5 1 221 150 363 150 372 0.94
Sequence Information
- Coding Sequence
- ATGGAACGTAGCGATAGCGTTGACTCCTTGGAGGATCTATTGAACGATCTAAACGATGATAGTGATGAGAGTTTTACGGAAAAAGTGACTAGTGAAAAGAAAGTGAAGTCTACCGGGACTAAAGAACATAGAAAAACGATTCAAGAATTGAAAGAAGGTAGCGAACGGGATGAAGCCAAAATTCAAAGCCACGAAACAAACCAGGACTTTGAGAAAGCGTCGACTCCATCGGACCCAGCGCAGTGTATCAATCCGAACGTAAGCTGTGATATTTCTAACGTTGAGCAACAAGGAGTTAAGATCCTGCTGGAAGGTGTGACTGAAAGTGAATCAAGCGATTACGCTACGCCTAGCAAGGATCAGCTCAAATCCAGCAGGAGTCATAGCCTCTCCTCGCACCTCGAAGAGGACGTCATCAATCAATTTTTGGATAAAACTACCGAAGACGCCGAGGCGCGTATGCTAGCTAAGAGACAAGCACGCGCCGAAGCTAGGGAAATTCGTATGCGAGAATTGGAACGACAGCAGAAGGAACAGGAGGAAAATGCCGACAGACAGTTCGATATGCTATCGGAACCAATCGCCAGGCCGACTCGAGCCACCGGTTCCAGATACCTGTCTAGCAGGAGGAGTTCCGAAGACTCCCTGGAGGATAGCGGTAGTCTTAGAGAATTACGACATGAACTTAAAGAAGTGGAGGAGAAGTTCCGAAAGGCGATGGTGGCCAATGCCCAGCTCGACAACGACAAGGCGGCGCAGACATATCAATTGGAGCTACTTAAAGATAGGTTAGAGGAATTAGAAGAAGAACATTCGCAATTGAAACGCGAACATAAAGACAAGTGCAGAGAGCACGACCAGCTGAAGCGGCTGTCGGCTCGTCTAAAGGAGGAATTGGCTGTGACGAAGGCTGAACTGGAGGAGCGAGATAGGTTAATAACGGAGAAGGGTCTGGTGATCGTCGGCGATGATTCGTTGTGCGAGGAGCCGTCGTCGGATGGGGCTGTGAACGGTTTGGGGACGCCTAAGAAGGCTCTGGTTAGCGTTGAGAACGCGCAATTGTTGGATGCGGTCGGTGAGGGTAGCTTAGTTCAGGCTCATAGAGGATTGTATAGAAGAAATAGATGGTTTTTAATTCCGGCTCCATATGTTGATATCCAATTATTTGATCAAATACAAACACAACCTCCTACACCCAATATATGTGAACCTAATAGTGCTAAGGAAAATAATACCGGAAATGTATGTACTGGACAAAATTGTGTAAAAGTACCAGAAGTAACCGAACAGAAACTAAGTGATCGTGTTGTGGAATATCGAAAATAG
- Protein Sequence
- MERSDSVDSLEDLLNDLNDDSDESFTEKVTSEKKVKSTGTKEHRKTIQELKEGSERDEAKIQSHETNQDFEKASTPSDPAQCINPNVSCDISNVEQQGVKILLEGVTESESSDYATPSKDQLKSSRSHSLSSHLEEDVINQFLDKTTEDAEARMLAKRQARAEAREIRMRELERQQKEQEENADRQFDMLSEPIARPTRATGSRYLSSRRSSEDSLEDSGSLRELRHELKEVEEKFRKAMVANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHKDKCREHDQLKRLSARLKEELAVTKAELEERDRLITEKGLVIVGDDSLCEEPSSDGAVNGLGTPKKALVSVENAQLLDAVGEGSLVQAHRGLYRRNRWFLIPAPYVDIQLFDQIQTQPPTPNICEPNSAKENNTGNVCTGQNCVKVPEVTEQKLSDRVVEYRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -