Dani023203.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_951804985.1
- Location
- OX638133.1:88362848-88371019[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 1.8e+03 -1.0 0.8 27 69 48 91 38 109 0.52 2 3 3.5e-93 4.3e-89 299.8 40.4 1 299 183 458 183 459 0.89 3 3 0.08 9.9e+02 -0.2 4.0 134 166 492 524 461 533 0.53
Sequence Information
- Coding Sequence
- ATGTCTGAAGAGATCGTTAGGGCACAAAAGGAAActgaacaaaatttaaacaacaacaaagtaCCCGTCCTACGTAGTGCTTCTTCGATTGATTATGACGAAATCGGTGAAGAATTCGACTTCAGTGATAGTGATTTAGAGCAACAGGAATTTAATGACAACGACAATAATGTTGCTAAACATACGACGAATGTTGataacgacgacgacgaccgGTTAACGGTTGCAACAGTATCAACCacaacaacagaaacaacaacaaatgttgGCCGTGAGAGCCCATCGACACACTTACCACACGTACCTGTTGAAAGCACAACTCACTCTCCCAAGATTGATGACGTAATTGCAAATAGCGATCATGTCGAGAGtcacaaaaataacaataataataataataaagttaATCAAAAGCATGCTAATGAATTGAATGGTGAGAAACATTCAACGACAGCCATTGATACCgaggatgatgatgacgatTACTATAGCGATGAACCAGAGGACGAGTTGATCGTGCAATTTTTAGGCGAAGCAAATAGAATCgcTGAAGCTCGTTTAACGGCACGCAGACAGGCTCGTGCAGAAGCACGCACGATCCGCATGCGTGAGCTGGAACGTCAACAACAGGATCAGGAGAACGATGCTGATCGTGTCTATGACATGCATTCGACCAATTCGCAGGAACCAATAACGCGCACCCGTGCATCCTCCAGACTGGAGGAAACAACATTGGATGAAGAAACTACGGGACGCGGTAACAACTTACGTGAAACACGACAGGAACTGAAGGATGCAGAGGAACGTTTTCGCAAAGCCATGATTGCCAATGCGCAATTGGACAACGAACGTGCGGCACAGTCGTATCAAATACAACATTTGAAGGATCAACTCGAAGAGCTGGAGGAGTCACATGCCCAACTGCAGCGCGAAGTAAAGGAAAAAACACGTGACGGCAATGCGCTCAAACGTAATCTGGACAAATTGACGGAGGAATTGAAACTGGTGCAGGGACAACTGCACGAACGTGATGCCTTAATTGCAGATCAGGGTCTGGTCATTGTTGCCGTAGAAAATGCGGATGGTACGGATGCAAGGCGGACATTGATTAGTGCTGAGAATGCACAATTGTTGGGCTCCGTACAAGGTTCACTGGATGTACGACTGAAGCGATTTAATGATGAAAAACAACAACTTAAAGAGGAAATATTGCAATTACATTTGCAATTAGATAACTACAAGTCGAAAGATAAGGAAGGTTATAATACAAAGACAGCTGAACAGTTGGAAGAGGAAACTGAGGCACAGCGAGAAGCCAATAAAATCATTTCGGATTATAAATTTCGTCTGCAAAAGACCGAACAGGAAGTGGCAAGTCTTCAGGCCAGTTTGGCGCGATCTGAGTCACAACTTGTGCGTTATAAAACCGCTGCGGAAGAAGCTGAAAAAGCTGAAGCCGAATTAAAAGGCGATAGAAGAAAACTACAACGCGAGAATCGTGAAGCTATCGAGCGTTTGGAAGAATTGGAAACCTCTAATAGTCATCTCCAGAAGAGACtggacaaattaaaaaatgccaaAAGTGCGCTGCTCAAAGAtctttaa
- Protein Sequence
- MSEEIVRAQKETEQNLNNNKVPVLRSASSIDYDEIGEEFDFSDSDLEQQEFNDNDNNVAKHTTNVDNDDDDRLTVATVSTTTTETTTNVGRESPSTHLPHVPVESTTHSPKIDDVIANSDHVESHKNNNNNNNKVNQKHANELNGEKHSTTAIDTEDDDDDYYSDEPEDELIVQFLGEANRIAEARLTARRQARAEARTIRMRELERQQQDQENDADRVYDMHSTNSQEPITRTRASSRLEETTLDEETTGRGNNLRETRQELKDAEERFRKAMIANAQLDNERAAQSYQIQHLKDQLEELEESHAQLQREVKEKTRDGNALKRNLDKLTEELKLVQGQLHERDALIADQGLVIVAVENADGTDARRTLISAENAQLLGSVQGSLDVRLKRFNDEKQQLKEEILQLHLQLDNYKSKDKEGYNTKTAEQLEEETEAQREANKIISDYKFRLQKTEQEVASLQASLARSESQLVRYKTAAEEAEKAEAELKGDRRKLQRENREAIERLEELETSNSHLQKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -