Dani016587.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- Pxd
- Assembly
- GCA_951804985.1
- Location
- OX638132.1:59374401-59387997[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-97 1.3e-93 314.6 22.6 1 299 33 320 33 321 0.88 2 2 0.082 1e+03 -0.2 1.8 221 249 350 378 326 420 0.55
Sequence Information
- Coding Sequence
- ATGGATAGTGGTAGCAGTGGCAGCTTGGTGGGCAGACGCCGTGGCAACTCTCAAGTAAACGCCGAGGATAAGGCGCTCGATCAGATTGCTAAAGAAGCCGAGGCTCGTCTGGCAGCACGACGGTTGGCTCGTGCGGAGGCACGAGAGGCTCGCATACGCGAACTGGAGCGGCAGCAGAAAAAGCTGGAAAATAATGCAGACCGTGTATTCGACAAGCAAACATTGGCCAGTGGCGACAGTATGACGCGATCGCGACTAGTGGCTGGTTTGGGAGGACTGTCGCCGGTGGTGCGTGTCAGCTCGATTTCAAGGCATAGTAGCGAGGACTCGCTGCAGGCAGAAGAGGGAGCGCCGCGTAGCGCACGCGATATGCGATACGAACTGCGCGAGGTGGAGGAGCGCTTTCGCAAGGTGATGATAACGAATGCGCAGCTGGACAACGAGTGTGCAGCTCAAACATATCAAATACAGCTGCTGAAGGACAAGCTGGAGGAGATTGACGAGGCGCATGCGCAAATGCAGCGCGAATGCAAGGAGAAAACGCGCGACTGCAGCGCTCTCACACGCAATCTGGATAAGCTGCACGAGGAGTTGAAGCTGGTAGAGGGTCAACTGCAAGAACGTGATACGTTGATTGCGGCACAGGGTCTGGTAATTGTGTCCGtcgaaaatgaagatggcacagaTGCTAAGAGAGCTCTAGTCACGGTGGATAATGCGCAATTATTGGGGGCCGTACAAGGATCGTTGGATACGCGACTCAAAAAGTTCAGTGAAGAGAAGCAGCACCTGCTGGGCGAGGTACAATCATTAAAAGACCAATTGTCCGGCTTTAGTAGAAAACCATTAACGAATGGAGGCGTGgacgatgatgacgatgacTACGATGCCCAAAGAGAAGCCAATAAAATAATTGCCGAATATAAATACAAACTGCAGAAGGCCGAGCAGGAAGTTGCGAGTCTACAGGCCAGTTTGGCGCGCTCGGAAACACAGGTCATTCGCTATAAAAGCACTGCAGAGGCTGCTGACAATGCCGAAACCGAGTTGAAGATCGAACGTAGAAAATTGCAGCGCGAAAACCGCGAAACCATGGAGCGCTTAGAAGAGCTGGAAACAGAAAACAGTCATCTGGTCAAGCGTTTGGATaaattaaagaatataaaaacAAACATAAATATTCCGAAACGAGAACGTGACTTCCTTAATACACTGACAGAAAATGATTTACGGCACTTTGTTGAACTTGGAGTTGATTCGGTATTCAAAGAGCAGAGATTGGAGCAGAACTTAAATGGTTCCAACATAACCGTTCTCAATGGCACTCTGTCTCATAATCAGCTGCTGGAAACATTGCCAAATGCGAAGGCACAGGATGACAGTGAAATCGCGTTGCGTATATTGAAGGCCAGCCAATATATTTACAACTCTAAATGTGTTCAACATGGGATCAGTCCAAACTACTGTAGACAGTATCTGGCGGAAAAACCCATACCGACCCAAACGCCACTTTGGAATGAGTGCAACGAGATTTTACGTCAAGGGCGCGATGGACATATTCCGTTGCGTCGTCTTTTGCCGAGTAACTATAAGGATGGACTGTATCAGATGTACTCAGAGGACAATCGACCAACAGCACGTTGGATCAGTAGCCATACCCTACATGGACAGCGTACAAACATTCATCTGGGAAATGAGGCGTTGGATGAGGGACACCGAAATCTCGCACTCACACAGTGGGCACAATTTATCGAGCATGATTTGAGCAAATCCGTTGCCACCTCAATGAAAAGTGGTCAGTCAATACAGTGTTGCCAACATGACAGCTACAAATTGCAACCGCGCTTTGTACATCCTGCGTGTGCGCCACTCGTGGGTAAAGATCCGGCTAATAAACATGGTCGAGACACATGTTTGAACTATGTACGCAGCGCATTGACGGTGGGCGCTCAATGTAATTTCGGTGCAGCAGAACAGCTTAATCAGGCAACTGGATATCTCGATCTTTCCCAACTTTACGGCTACACAAATGACGTACAACAACGCATGCGCTTGCATCGAGATGGCAAAATTAAATCCACCTCAACATCAACAAATCCAACGGAAGACATGTTGCCTTTGGCCACTGAGAATCCCTTTGCATTTTGCGCCCTCAGAGGTGACTCCAACGAAAATTGCTACATGTCGGGAGACTCGCGCATCAATAACAACCCGTTCTCAATTGTGCTACACACCATCTTTATGCGTTCGCATAACCGAATTGCAGCTCATTTGAAACTGCGAAATGAACGTTGGGATGATGAGCTTCTTTATAATAATGCCAAAAATATCAATGTTCAAATATATCGCCGCATCGTGCTCGACGAATGGATGCCCACAGTGCTGGGCAAGCGTTTGGCGGACGCTATCAAGGCGGAAGAATCCTTGCCTAAAGCTTCGCTTCCAAATGAGAGTCAGCTGCAGATATCGAACGAGTTCGCGGTGGCAGctatacgtttttatttttctatgttgCCAAATGTTTTGCATGACTTAGCTACTGCTGCAACCCAAAATAAcaaTGTTTCACCAACGTCCGATTTGTTTGTGCTCAAGGATCAGCTGTACAAATCTCAAAGCTTAAATAAGTCACAGGAACTTGACCATATACTGGTATCACTGCTGCAACAACGATCTATGAAGATGGACTCAACATATGCGGATTCCttTATACAGAGCTACATGGGCACCAATCTGCCCACTCGTTCCGATGTATTAGCTTTCGATATACAACGCGGACGTGATCACGGCCTGCAAGGTTATGTTAAGTATTTGGAGATCTGCGAGGGCATTAAAGTAAATAACTGGAATGATTTGCAAAAATACATCAGTGCTAATGATCTCGATAAATTAAAGACGACTTATGATAGTTGGCTCGATGTGGACCTAATTGTCGGCGGCATATCGGAGCAGCCTTTGGATGGCTCCAGCGTAGGTCCGACGTTTAGCTGCATTTTGGCTGAACAATTCTCAAAGATGTATCAATGGCAACAGATGTTGGACCAGCAGCAGACAAAGATTCAGCCTGCAGAACTCAACTACTATCGGAACTGGAACGGTTCATATCTTTTGTGTGCGAATTCTCAAGTGAAGGAAGTGCCAaggaatatttttgcaattccATCAATAGAAAATCCCCTGCTTTCGTGTGCTGCTATGCTTCAGTCGGAGGCAGAGGTTCAAAGACCGAAGCACTTATAA
- Protein Sequence
- MDSGSSGSLVGRRRGNSQVNAEDKALDQIAKEAEARLAARRLARAEAREARIRELERQQKKLENNADRVFDKQTLASGDSMTRSRLVAGLGGLSPVVRVSSISRHSSEDSLQAEEGAPRSARDMRYELREVEERFRKVMITNAQLDNECAAQTYQIQLLKDKLEEIDEAHAQMQRECKEKTRDCSALTRNLDKLHEELKLVEGQLQERDTLIAAQGLVIVSVENEDGTDAKRALVTVDNAQLLGAVQGSLDTRLKKFSEEKQHLLGEVQSLKDQLSGFSRKPLTNGGVDDDDDDYDAQREANKIIAEYKYKLQKAEQEVASLQASLARSETQVIRYKSTAEAADNAETELKIERRKLQRENRETMERLEELETENSHLVKRLDKLKNIKTNINIPKRERDFLNTLTENDLRHFVELGVDSVFKEQRLEQNLNGSNITVLNGTLSHNQLLETLPNAKAQDDSEIALRILKASQYIYNSKCVQHGISPNYCRQYLAEKPIPTQTPLWNECNEILRQGRDGHIPLRRLLPSNYKDGLYQMYSEDNRPTARWISSHTLHGQRTNIHLGNEALDEGHRNLALTQWAQFIEHDLSKSVATSMKSGQSIQCCQHDSYKLQPRFVHPACAPLVGKDPANKHGRDTCLNYVRSALTVGAQCNFGAAEQLNQATGYLDLSQLYGYTNDVQQRMRLHRDGKIKSTSTSTNPTEDMLPLATENPFAFCALRGDSNENCYMSGDSRINNNPFSIVLHTIFMRSHNRIAAHLKLRNERWDDELLYNNAKNINVQIYRRIVLDEWMPTVLGKRLADAIKAEESLPKASLPNESQLQISNEFAVAAIRFYFSMLPNVLHDLATAATQNNNVSPTSDLFVLKDQLYKSQSLNKSQELDHILVSLLQQRSMKMDSTYADSFIQSYMGTNLPTRSDVLAFDIQRGRDHGLQGYVKYLEICEGIKVNNWNDLQKYISANDLDKLKTTYDSWLDVDLIVGGISEQPLDGSSVGPTFSCILAEQFSKMYQWQQMLDQQQTKIQPAELNYYRNWNGSYLLCANSQVKEVPRNIFAIPSIENPLLSCAAMLQSEAEVQRPKHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -