Dani011402.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- Gcfc2
- Assembly
- GCA_951804985.1
- Location
- OX638131.1:69671261-69673048[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9 3.6e+03 -1.7 0.1 52 71 81 100 48 142 0.68 2 3 0.032 62 4.1 0.0 4 32 248 276 245 277 0.89 3 3 1.7e-12 3.2e-09 37.8 0.1 121 190 272 341 255 347 0.87
Sequence Information
- Coding Sequence
- ATGCTGCCCTCAAAATACGCTAATGACGATGTGCGCGAACTGTTGGATTTCCGACCCGATCGCGTTTTGCGTTTCTTGCGCTTATTTGACTCCGATGACGAGGGCAAACTTTTGCACATCTACAGCAACGAGGACATCAAGCAAGAGGTGTTGTCACGCTTTGTCATCAAATCCTCTGCGGTCGCATTGGAACAGTCTATGGTGCCACAGTCCACATCGACGTTGCTGGAGCAGGCGTATGCCAAGAATGTGTTGCAGAAGCCACAGCAGATGCTGCGCAACACACAGAGCGAACAGGATAAGAACAAAATGCACCCAATGAAATACGACAGACCATTAGAACTACGCGAACTAAATGCCAAGCACAGCGCCGACGTTGAGCGCATCTCCAGCGAATTGCAGCAGCTGCAGATGTACACGGAGCACGCACCCACGGCAgtggccaaatattgtttctaTCAGGAGCTCAACTGTTATGTCTCAGACATGGTGGATTGTCTCAATAAAAAGTTTGTCGCCATCAGTGACTTGGAGAAATTGGCCATGCAAACGCAGTACAAACATCAGGCCTGTTCGAGCGTCGGCGACAGGATTGTCGAACACGAGGAACAACTGCGTCGTGCCGCTGAACGTGATGGTAGACGCACGCGTACCGCTGTGAACACTAGTCTAGAACAACTTGCGCAAGCAGCTGAAGAAATCTTTGTCGATGTCACCGATGAGTTCTGCAAAGTCGAGTTAATACTTCTGAAGTTTTATATTTGGCGCAAAACAGATATGGAATCGTATAAGGATGCTTTTGTCAGTCTTTGTCTGCCCAaggtttTGACCACGATTATTGAGAAAATTATACTGCCGAAAATAACAGAAATTGTTAAATTCTGCTGGGATCCACTGTCTACAACGCAAACACTACATTTGATCGGCTGCATAAACCGATTCGGACGTGATTTTCCTCTTAAAGAAACGCTGCAGCACCTCTTCAATAAAATATTGGACAAACTGAAGGTGGCTCTAGACAACGATGTATTTATACCAATGCACATCTACAGCAACGAGGCCATCAAGCAGGAGAGTCCCGAATATGGCGAGAATAAACCGAAAATTGCCGACTAA
- Protein Sequence
- MLPSKYANDDVRELLDFRPDRVLRFLRLFDSDDEGKLLHIYSNEDIKQEVLSRFVIKSSAVALEQSMVPQSTSTLLEQAYAKNVLQKPQQMLRNTQSEQDKNKMHPMKYDRPLELRELNAKHSADVERISSELQQLQMYTEHAPTAVAKYCFYQELNCYVSDMVDCLNKKFVAISDLEKLAMQTQYKHQACSSVGDRIVEHEEQLRRAAERDGRRTRTAVNTSLEQLAQAAEEIFVDVTDEFCKVELILLKFYIWRKTDMESYKDAFVSLCLPKVLTTIIEKIILPKITEIVKFCWDPLSTTQTLHLIGCINRFGRDFPLKETLQHLFNKILDKLKVALDNDVFIPMHIYSNEAIKQESPEYGENKPKIAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -