Dani011127.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- PAXBP1
- Assembly
- GCA_951804985.1
- Location
- OX638131.1:65221798-65223633[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9 1.7e+04 -4.0 0.2 219 237 56 74 48 83 0.44 2 3 1.5e-11 3e-08 34.6 0.0 4 59 258 313 255 320 0.92 3 3 3.1e-11 6e-08 33.6 0.0 127 190 324 390 316 396 0.92
Sequence Information
- Coding Sequence
- ATGCTGCCCTCAAAATACGCTAATGTCGATGTGCGCGAACTGTTGGATTTCCGACCCGATCGCGTTTTGCGTTTCTCGCGCTTATTTGACTCCGATGACGAGGACAAACTTTTTCCCATCTACAGAAACAGTTCCACATTGACGCTGCTGGAGCAGGCGTATGCCAAGAATGCGTTGCAGAAGCCACAGCAGATGCTGCGCAACACACAGAGCAAACAGAATAACAACAAAATGCAGATATTAAGAGCACCCAATGAAATACGACAGACCATTAGAATCAGATTGACAAAACTACGCGAACTAAATGCCAAGCCAGCGCCGACGTTGAGCGCATCTCCAGCGAATTGCAGCAGCTGCAACAGGATCAGCAGGAGTACACGGAGCGCGCGCCCACGGCAGATCCCTTTTGTTTTTTGTGACTTGGAGAAATTGGCCATGCAAAAGCAGTACAAACATCAGGCCTGTTTAATCGAGCACCGGCGACAGGATGTGCGCCATCAGGCCAAGGAAATGGCAGATACCTTAAAACCCACCTATTCCGCAGTCGCGCGTCGTAGTGTCGAACACGAGGAACAAGTGCGTCGTGCCGCTGAACGTGATGGCAGACGCACGCGTCGCCGCTGTCAACGTGAAAAGAACGAACTCTTGGCCTTGCACTCTTGGCCTTGCACACGAGGAACAAAACAGTTTAAGACTAGTCTAGAACAACTTGCGCAAGCAGCTGAAGAAATCTTTTTCGATGTCACCGATGAGTTCTGCAAAGTCGAGTTAATACTTATGAAGTTTTATATTTGGCGCAAAACAGATATGGAATCGTATAAGGATGCTTTTGTCAGTCTTTGTCTGCCCAatGTCTTGGGACCCTTAATACGCGTGGAGCTACTCAATTGGTCGCCGCTCAATGACGAATACAAAGATATTGAGAAAATGAATAGGTTTGCGGCATCCATGCTGTACGCTTATGTGCCCACGATTATTGAGAAAATTATACTGCCGAAAATAACAGAAATTGTTAAATTCTGCTGGGATCCACTGTCTACAACGCAAACACTACGTTTGATCGGCTGCATAAATCGACTCGGACGTGATTTTCCTCTAAAAGAAACGTCAAAATCGCTGCAGCACCTCTTCAATAAAATATTGGACAAACTGAAGGTGGCTCTAGACAACGATGTATTTATACCAATGCACATCTACAGCAATGAGGCCATCAAGCAGGAGAGTCCCgaatatacacacagaaaaaaaagtgtgtaa
- Protein Sequence
- MLPSKYANVDVRELLDFRPDRVLRFSRLFDSDDEDKLFPIYRNSSTLTLLEQAYAKNALQKPQQMLRNTQSKQNNNKMQILRAPNEIRQTIRIRLTKLRELNAKPAPTLSASPANCSSCNRISRSTRSARPRQIPFVFCDLEKLAMQKQYKHQACLIEHRRQDVRHQAKEMADTLKPTYSAVARRSVEHEEQVRRAAERDGRRTRRRCQREKNELLALHSWPCTRGTKQFKTSLEQLAQAAEEIFFDVTDEFCKVELILMKFYIWRKTDMESYKDAFVSLCLPNVLGPLIRVELLNWSPLNDEYKDIEKMNRFAASMLYAYVPTIIEKIILPKITEIVKFCWDPLSTTQTLRLIGCINRLGRDFPLKETSKSLQHLFNKILDKLKVALDNDVFIPMHIYSNEAIKQESPEYTHRKKSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -