Dani020332.1
Basic Information
- Insect
- Dryomyza anilis
- Gene Symbol
- -
- Assembly
- GCA_951804985.1
- Location
- OX638133.1:25640256-25645416[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.1e-11 1.4e-07 32.1 0.0 1 38 540 578 540 583 0.89 2 4 1.3e-13 4.4e-10 40.1 0.1 2 39 595 632 594 635 0.94 3 4 1.5e-17 5.1e-14 52.7 0.0 1 45 649 694 649 694 0.98 4 4 2.7e-20 9.2e-17 61.5 0.0 1 45 701 746 701 746 0.97
Sequence Information
- Coding Sequence
- ATGATtgtgacaacaacaacagcagcaccaCCACCAGCAGTTTTGGGTGCGGCGCGCGGTCTGCTACGCACCGCCGAGCAACTAAAAATCAAGGGTCTCTGCGAAACCGCTGAGAATACTGACGACATTGCAGACGCCGCTACCGCCACCATCACCGTCTCCGAAAACATACAACAGACGGTTGTTGGCAACATTGTCAGTGCAACAGTCTCGCCAGGGCAGCAATCGCCCAACTCacaacatcaacagcagcaacaacagcagcagcagcaacatcagcaacaaGCAAATGCCGCTGTGCTGACACATGCCAACATCGCCAACATCAATGCGAGCAACGCCGCGCAACAATCATTAGCAGCCGCAGGTGGCAGCATTGGCAATAttgttgcaacaacaacagttgctactacacaacagcagcagcaacaacagcagcttgCACGTAAATCACGCGTACGCAAGCGCTCAAAATCACCTGAtctgcagcaacagcagcaacaacatttgcagcagcagcatccACAGGCGATactaatacaaaatcaaaatcaggCTTCCATTGTCAGCCTACAACAGACCGCTTCCGGCAGCTATATTCCAATAACTGCCAGCAGCCAACAACACCTGCaggaacagcagcaacaacagcagcagttgGAAGACTCCGACAGCGATAAGCCCTCCCTGCAAAAGATCTGCAAAACTGAAACGTCTGCCGCATCGCCTTCTTCTTCGGTTGCGTCCTCGAATAATGGTGGCAGCGTCTctgcagcagcagtagcagcagcaacatcagcaccCGGTACAGCAATTGTCACACAGATTGTAGTTGCACGCGACGGCAAAGATAAAAATATGACCAGCTTAGGCATGGGCATGAACGGCGGCCTTCTTGGCGTGCCAATGGGCTTTTTAGATTTTGCACCCGAACCACCAGCTCCATCGGCAACGCCTGTCACCGTCACGGAACACGTCGACCTCTCATGCAATCCCAGCACCGACACCAGAGATTTATCAAATCCCACCGAACCGCTCGATATCGACAATCATCTGGCACAGCACATGATACAACGGCTCGATCATTCGCCCATGCATTCGATTCATCATCAAACTGGCGATGAAAGCAATTCGAATTTGGTGCAACACATCAAGAGCGAGGTGATCGAagtcaaacaacaacaacagcaacaacaacaacagcagcaacaacatcatcaggCGCAACAGCATCAGTTGCATACACAACAAACACTTGTACAGGGACAATCGCAgcaccaacagcaacaacaacagccgcaacaacatcatcagcagcaacatcaacagcagcagcaacatcaacaacaccaacaacagaCGCACCAGGAAATCACTGGTGCGACTGTGATGGAAATCGATCCGAGTCAAATAAAACACGAACCCGGCATGATAATAACGCCAGAGATTGTGAATATGATGACCACAGGACATATGGACATGTACAATTCTGATACCAGCGAGGATTCAATGATGATTGCCAACGGCTCGCCCAACGATAATACCGAGCCGCACTACACGAATCTGGACCAACAGCATGGCGATAACAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAATATGAGTTTGACGAAAGCGTCCGTCACATATGGCATCCCATCGACCACACTGTGGCAACGCGCTCATCGCATGGGCATTGAAACGCCAAAGAAGGAAGGCGGCACAAAATCATGGAATGAAGATTCCTTAAATAGTGCCTTAGAAGCACTGCGCACCGGTCAGATATCCGCGAATAAAGCCTCCAAGGCATATGGTATACCGTCCTCAACGTTGTATAAGATTGCGCGTCGCGAGGGTATCCGTTTGGCGGCACCATTCAATGCGGCGCCCACCACATGGACCCCGGAGGATTTGGAACGTGCACTGGAGGCCATACGTGCCGGTCATACGTCCGTCCAAAAGGCTAGCGCTGAATTTGGCATACCAACAGGAACACTCTACGGCCGTTGCAAACGTGAAGGCATCGAATTATCGCGCTCCAATCCGACGCCCTGGTCCGAAGATGCCATGAACGAGGCATTAAATTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAATCTGCCGTACAGTTCACTGTATGGACGCTTCAAGCGCGGCAAATACGATGTATCCAATACGAGCGTCACTTCAATAAACAATACATCGGGCAACACATCGGGCAGCATTGAAATCATCGAACACAGCCAAGAGAATTCGTTGCAAATGTTTCAGCAGCAGTTTCAATACAGTCCATCGccgcatcagcagcagcagcaacaacagcagcaacaacagcagcagcagcaacatcagccaCAAACACCACAACACATACAGCATGATGTGGTAACATCCAGCAGCCAAGTACAGCATGCGACAGCCAGTGGTCAACAGATTCAGCAGATCTATCATCATCACAGCACGCCCGAGAGGAGTTGA
- Protein Sequence
- MIVTTTTAAPPPAVLGAARGLLRTAEQLKIKGLCETAENTDDIADAATATITVSENIQQTVVGNIVSATVSPGQQSPNSQHQQQQQQQQQQHQQQANAAVLTHANIANINASNAAQQSLAAAGGSIGNIVATTTVATTQQQQQQQQLARKSRVRKRSKSPDLQQQQQQHLQQQHPQAILIQNQNQASIVSLQQTASGSYIPITASSQQHLQEQQQQQQQLEDSDSDKPSLQKICKTETSAASPSSSVASSNNGGSVSAAAVAAATSAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDHSPMHSIHHQTGDESNSNLVQHIKSEVIEVKQQQQQQQQQQQQHHQAQQHQLHTQQTLVQGQSQHQQQQQQPQQHHQQQHQQQQQHQQHQQQTHQEITGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDNTEPHYTNLDQQHGDNKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNTSVTSINNTSGNTSGSIEIIEHSQENSLQMFQQQFQYSPSPHQQQQQQQQQQQQQQQHQPQTPQHIQHDVVTSSSQVQHATASGQQIQQIYHHHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00352454;
- 90% Identity
- -
- 80% Identity
- -