Basic Information

Insect: Coelopa pilipes
Gene Symbol: -
Assembly: GCA_947389925.1
Location: OX376698.1:34250629-34254531[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3.2e-11 1.1e-07 32.2 0.0 1 38 484 522 484 527 0.89

2 4 1e-13 3.5e-10 40.2 0.1 2 39 539 576 538 579 0.94

3 4 1.2e-17 4.1e-14 52.8 0.0 1 45 593 638 593 638 0.98

4 4 2.1e-20 7.3e-17 61.6 0.0 1 45 645 690 645 690 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3.2e-11	1.1e-07	32.2	0.0	1	38	484	522	484	527	0.89
2	4	1e-13	3.5e-10	40.2	0.1	2	39	539	576	538	579	0.94
3	4	1.2e-17	4.1e-14	52.8	0.0	1	45	593	638	593	638	0.98
4	4	2.1e-20	7.3e-17	61.6	0.0	1	45	645	690	645	690	0.97

Sequence Information

Coding Sequence: ATGGGTCTCCTCCGCACCGCCGAGCAGCTCAAAATCAAGGGTCTCTGCGAAACCGCCGAGAACACGGACGACATCGCGGACGCCGCCACAGCCACCATCACCGTGTCGGAGAACATCCAGCAGGCCGTCGTTGGCAACATCGTCAATGCGACGGTAGCCCAGGGCCAGCCCTCGCCCACGACGCAGCACCACCAGCAGCAGCAGCAGCAGGTAGCTGCCAATGCCGCCGTGCTGACGCACACAATCGCCAATGTGAATGCGACAAACGCTcaagcactagcaggaagcggcaacattggcagcgtggtggccacgacagccggcaacatccagcaactgtcacgcaagtcgcgcgtacgcaagcgctccaagtcgccagatctgcaacaacagcagcagcaccaccaacagcagcatccgcAGGCGATCCTCATACAGAACCAGAACCAGGCGTCCATCGTCAGCCTGCAGCAGACCTCCAGCGGCAGCTACATTCCGCTCTCCGGCGGGCAGACCGTGACCACGCAAGCGGCCGCCCACCAGCAGCAGTCGCAGCTTGACGAGACCGACGCAGACAAGCCGTCGCTACAGAAGATCTGCAAAACGGAAACGTCCGCCGCCTCGCCGTCTTCATCGGGCTCGTCGACAAATAATGGTGGCAGCGTAACAACAGTCGCAGCACCAGGAACAGCGATCGTCACCCAAATTGTAGTAGCACGCGACGGCAAAGACAAGAACATGACTAGCTTAGGAATGGGCATGAATGGTGGTCTGCTTGGAGTACCAATGGGATTCTTGGATTTCGCACCGGAACCACCAGCACCTTCGGCAACACCTGTCACTGTCACGGAGCACGTCGACCTTTCGTGCAACCCCAGCACGGACACCAGAGATCTATCAAATCCCACCGAACCGCTCGATATCGACAATCATCTGGCGCAACATATGATTCAGAGACTCGATCAATCACCCATGCACACGATCCACCATCAAACCGGAGACGAaagcaattcgaatctggtgcagcatatcaaaagcgaggtgatcgaagtcaagcaacagcagcaacatcatcagtcacagcatcaaatgcatacgcaacaaaacattgcacagggacaatcgcaacatcagcaacaacaacagcatcagcaacatcaacaacagcaacaacaacagcaacaacagcaaacgcaccaagaaatctcgggtgcgactgttatggaaattgatCCAAGTCAAATAAAACACGAACCCGGCATGATTATCACACCAGAAATTGTCAACATGATGACCACTGGGCATATGGATATGTACAACTCCGACACCAGTGAAGATTCAATGATGATCGCCAATGGTTCACCAAATGACAATAATGAGCCTCACTACACCAATCTGGACCAACAGCATGGCGATAACAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCACTGAAGAATCAAAATATGAGCTTGACGAAAGCATCCGTAACATATGGTATCCCATCGACCACCCTATGGCAGCGAGCACATCGCATGGGTATAGAAACGCCGAAGAAGGAAGGCGGCACTAAGTCATGGAATGAGGATTCATTAAACAGTGCATTAGAAGCCTTACGAACGGGCCAAATATCCGCGAATAAAGCATCTAAAGCATACGGTATTCCGTCCTCAACATTATATAAAATCGCCCGTCGCGAGGGTATCCGCTTGGCGGCACCATTCAATGCGGCGCCCACAACATGGACGCCAGAAGATTTGGAACGTGCATTAGAGGCCATAAGAGCCGGCCATACGTCCGTCCAGAAAGCCAGTGCTGAATTCGGTATACCAACAGGAACCCTATACGGACGCTGCAAACGCGAGGGTATTGAATTGTCTCGGTCGAATCCGACTCCATGGTCAGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGGGTGGGACAAATGTCCATAAATCAAGCCGCAATCCACTACAACCTACCCTACAGCTCGCTATATGGTCGCTTTAAGCGCGGCAAGTACGACGTCTCGAACACTAGCGGCACCTCCATAAACAACACGTCCGGCAACACGTCCGGCAGCATTGAAATAATCGAGCACAGTCAAGAGAACTCCttgcacatgtttcagcaacagttccagtacagtccagcaccacaccagcagcaacaacagcagcagcatcagccacaaacaccacagcacatacaacacgttgtgcacattcaacagcaacacacaccgacccaacagcagcagcatcaccagcagcagcacgcgcaacatatccaacagcagcaggacgtggtgacatccagcagtcaggtgcagcactcgacaccgaccggacagcagatccagcagatctaccaccaccacagcaCTCCGGAGAGGAGTTGA
Protein Sequence: MGLLRTAEQLKIKGLCETAENTDDIADAATATITVSENIQQAVVGNIVNATVAQGQPSPTTQHHQQQQQQVAANAAVLTHTIANVNATNAQALAGSGNIGSVVATTAGNIQQLSRKSRVRKRSKSPDLQQQQQHHQQQHPQAILIQNQNQASIVSLQQTSSGSYIPLSGGQTVTTQAAAHQQQSQLDETDADKPSLQKICKTETSAASPSSSGSSTNNGGSVTTVAAPGTAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQHMIQRLDQSPMHTIHHQTGDESNSNLVQHIKSEVIEVKQQQQHHQSQHQMHTQQNIAQGQSQHQQQQQHQQHQQQQQQQQQQQTHQEISGATVMEIDPSQIKHEPGMIITPEIVNMMTTGHMDMYNSDTSEDSMMIANGSPNDNNEPHYTNLDQQHGDNKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVSNTSGTSINNTSGNTSGSIEIIEHSQENSLHMFQQQFQYSPAPHQQQQQQQHQPQTPQHIQHVVHIQQQHTPTQQQQHHQQQHAQHIQQQQDVVTSSSQVQHSTPTGQQIQQIYHHHSTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00624659;
90% Identity: -
80% Identity: -