Basic Information

Insect: Dryococelus australis
Gene Symbol: -
Assembly: GCA_029891345.1
Location: CM056993.1:383739121-383741061[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00033 0.29 15.1 0.2 1 23 108 130 108 130 0.94

2 12 1.9e-05 0.017 19.0 1.6 1 23 138 160 138 160 0.99

3 12 2.3e-05 0.02 18.8 0.4 2 23 168 189 167 189 0.97

4 12 1.7e-06 0.0014 22.4 1.9 1 23 195 217 195 217 0.99

5 12 9.5e-06 0.0083 20.0 0.8 1 23 224 246 224 246 0.97

6 12 2.4e-05 0.021 18.7 0.0 1 23 252 274 252 274 0.94

7 12 4.8e-05 0.042 17.8 0.2 1 23 280 302 280 302 0.97

8 12 5.6e-07 0.00049 23.9 1.2 1 23 308 331 308 331 0.96

9 12 0.00089 0.78 13.8 0.4 1 23 337 360 337 360 0.94

10 12 1.6e-06 0.0014 22.4 1.5 1 23 366 388 366 388 0.99

11 12 8.6e-05 0.075 17.0 0.4 1 23 394 416 394 416 0.94

12 12 0.00047 0.41 14.7 0.1 1 23 422 446 422 446 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00033	0.29	15.1	0.2	1	23	108	130	108	130	0.94
2	12	1.9e-05	0.017	19.0	1.6	1	23	138	160	138	160	0.99
3	12	2.3e-05	0.02	18.8	0.4	2	23	168	189	167	189	0.97
4	12	1.7e-06	0.0014	22.4	1.9	1	23	195	217	195	217	0.99
5	12	9.5e-06	0.0083	20.0	0.8	1	23	224	246	224	246	0.97
6	12	2.4e-05	0.021	18.7	0.0	1	23	252	274	252	274	0.94
7	12	4.8e-05	0.042	17.8	0.2	1	23	280	302	280	302	0.97
8	12	5.6e-07	0.00049	23.9	1.2	1	23	308	331	308	331	0.96
9	12	0.00089	0.78	13.8	0.4	1	23	337	360	337	360	0.94
10	12	1.6e-06	0.0014	22.4	1.5	1	23	366	388	366	388	0.99
11	12	8.6e-05	0.075	17.0	0.4	1	23	394	416	394	416	0.94
12	12	0.00047	0.41	14.7	0.1	1	23	422	446	422	446	0.92

Sequence Information

Coding Sequence: ATGACTGGCCAGGGAGTCAGTGAAGATGAGTTGAACATGGTGCCTGCTACACAAAGTGGTGACATGATGGAAGCGGAGGGAGAGCTGCATGTGAAGATCAAGCTCGAGCCAGGAGAGGTTACTCACATGAAGCATTACATTGGTCGCAGGCCCATGATGAAGAAGAAGGCCAGGATCACCGTGCACGAGGTGGATCAAGAACAGGTGATAATGCGTGATGGAAACGATTTTGCGTGTTTGTTGTGCACCGAGGAAGAAAAGGTGATTGGGGACATGAAGGGAATAAGCACCCACATGAAGACTGTCCATGGCATTCgtgtttatatttgtgatatatgtGGTCAGGACTTTCGAAAGAGAAATGAGCTCTCGCTTCATTTGGATGATCACGTCGCAGCAGAGGAGGGGGACTTTCAGTGTGAAGTGTGCAATAGGATATTTAGTAACTTGCGTTTGTTTCGCGTGCACAAGCGAATGCACTATCCCCAAGCAAAGTTGTGGACTTGTGAAACGTGTGGTAAGCGTTACAGCTCGCGTAATCTCTTGGACGAacacataaatacacatttgGGTGTCAGGCCATACAAGTGCAAGCTCTGTGGTAAGGACTTTGCATCCAAATATACTTTTAAAGCTCATGCGAAAACTCACGAGGTACGACCACGACCTTTTGCATGCAGCGAGTGTGGTAAAACATTTCTCAGTCAGCAGAATTTGATGCAACACGAACGTACTCACAATGGAATGCGTAATTATGTGTGTGATCAGTGTGGGAAAGCATTTGGCACTGCTCGTAACCTGGAAGTACATAGTGTCGTGCATTCTGGTTATAAACCTTTTATATGCCGCACCTGTGGAAAAGCTTTCGCACGGAAAGCAGAAATTAGAGATCATGAACGCATTCACACAGGAGAAAAACCTTACCAGTGTGAGTTTTGCGGAGCCACTTTTAGCCAGCGGAGCAACCTGCAGTCGCACAAGCGAGCCACACACTATCAGGACAAACGCTACAAGTGCATAGATTGTGGAAAAGGCTTCAAGCGTAGACGATTGCTTGACTACCATGTGAAAGCTGCGCACACTGGAGAGAGACCCTACAAATGCCCCATCTGCGAAGCAACTTTCGTGTATCCGGAGCACTTCAAAAAGCACCGTCGTATCCACACAGGTGAGAAGCCGTTTCTCTGCGAGGTGTGTGGTAAAGCCTTCAACAGTCGAGACAATCGCAATGCTCACCGTTTCGTTCACTCCGACAAGAAGCCATACGAGTGCCTTGTATGCGGCATGGGCTTCATGCGCAAACCATTGCTCTATAATCACATGCAATCACAGGGGCATATGAACGACACAATTGTGGTGAACCAGCCACGGCTGACCAACGAGGATGACATCCTGAACGTGGCAGATGACACCGGAGAGGTGGAGATGACCATCGTGGAAGGATCGTCTAGCCACGACACAGACACAAAACTTTACATCGCAGAGCTGAAGGAGCACGTGCTGATTCAGGAAGGAGAAGAAGAACACGTGTACGCGGAGAAGATGGAGGCGGACGTAGAGGAGGGTGTTCAGGAGGCAGTAGAGCACTTGATTATTGATGGTCAAGTGCATTTTGCAGACCCAAATGAAATAGCAAATCTACATGGGGAGATTGGCTCGGTAGCAGAGATTACAACCACAACTGCAGCAAACTACTCGCAGCATCGTGGGGGGGAGGGCCGTCACACGCTGGTGGTGCCTGCGACCCCCAACATGCTCTCCGCAGGTGAGATTGCGTACGAGGAGAACGAACACCAAGGCGAAGAAGCATCCATCATGACCCTCACCTCACCGCAATCCATCCAGACCAGTGGGGGACCTGTGCACTTAGTTCAGATCAGGATACCATCTGATCAGAATGGCACTCGTAACTGGTTCAATGCCATCGACAGCTCACAGTGA
Protein Sequence: MTGQGVSEDELNMVPATQSGDMMEAEGELHVKIKLEPGEVTHMKHYIGRRPMMKKKARITVHEVDQEQVIMRDGNDFACLLCTEEEKVIGDMKGISTHMKTVHGIRVYICDICGQDFRKRNELSLHLDDHVAAEEGDFQCEVCNRIFSNLRLFRVHKRMHYPQAKLWTCETCGKRYSSRNLLDEHINTHLGVRPYKCKLCGKDFASKYTFKAHAKTHEVRPRPFACSECGKTFLSQQNLMQHERTHNGMRNYVCDQCGKAFGTARNLEVHSVVHSGYKPFICRTCGKAFARKAEIRDHERIHTGEKPYQCEFCGATFSQRSNLQSHKRATHYQDKRYKCIDCGKGFKRRRLLDYHVKAAHTGERPYKCPICEATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGMGFMRKPLLYNHMQSQGHMNDTIVVNQPRLTNEDDILNVADDTGEVEMTIVEGSSSHDTDTKLYIAELKEHVLIQEGEEEHVYAEKMEADVEEGVQEAVEHLIIDGQVHFADPNEIANLHGEIGSVAEITTTTAANYSQHRGGEGRHTLVVPATPNMLSAGEIAYEENEHQGEEASIMTLTSPQSIQTSGGPVHLVQIRIPSDQNGTRNWFNAIDSSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00189215;
90% Identity: iTF_00189215;
80% Identity: -