Basic Information

Insect: Bacillus rossius
Gene Symbol: -
Assembly: GCA_032445375.1
Location: CM063640.1:232743149-232745077[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0005 0.14 15.2 0.2 1 23 113 135 113 135 0.94

2 12 2.9e-05 0.0078 19.1 1.6 1 23 143 165 143 165 0.99

3 12 3.5e-05 0.0094 18.8 0.4 2 23 173 194 172 194 0.97

4 12 3.3e-05 0.0089 18.9 2.6 1 23 200 222 200 222 0.99

5 12 1.3e-05 0.0034 20.2 0.7 1 23 229 251 229 251 0.97

6 12 3.7e-05 0.01 18.7 0.0 1 23 257 279 257 279 0.94

7 12 7.3e-05 0.02 17.8 0.2 1 23 285 307 285 307 0.97

8 12 8.5e-07 0.00023 23.9 1.2 1 23 313 336 313 336 0.96

9 12 6e-05 0.016 18.1 0.6 1 23 342 365 342 365 0.95

10 12 2.4e-06 0.00066 22.4 1.5 1 23 371 393 371 393 0.99

11 12 0.00013 0.035 17.0 0.4 1 23 399 421 399 421 0.94

12 12 0.00051 0.14 15.1 0.2 1 23 427 451 427 451 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0005	0.14	15.2	0.2	1	23	113	135	113	135	0.94
2	12	2.9e-05	0.0078	19.1	1.6	1	23	143	165	143	165	0.99
3	12	3.5e-05	0.0094	18.8	0.4	2	23	173	194	172	194	0.97
4	12	3.3e-05	0.0089	18.9	2.6	1	23	200	222	200	222	0.99
5	12	1.3e-05	0.0034	20.2	0.7	1	23	229	251	229	251	0.97
6	12	3.7e-05	0.01	18.7	0.0	1	23	257	279	257	279	0.94
7	12	7.3e-05	0.02	17.8	0.2	1	23	285	307	285	307	0.97
8	12	8.5e-07	0.00023	23.9	1.2	1	23	313	336	313	336	0.96
9	12	6e-05	0.016	18.1	0.6	1	23	342	365	342	365	0.95
10	12	2.4e-06	0.00066	22.4	1.5	1	23	371	393	371	393	0.99
11	12	0.00013	0.035	17.0	0.4	1	23	399	421	399	421	0.94
12	12	0.00051	0.14	15.1	0.2	1	23	427	451	427	451	0.92

Sequence Information

Coding Sequence: ATGTTGGAACCAGAGATGACGACTCAAGTAGGCAGTGAAGACGAGTTGAACGTGGTGCCGGCTGCCCAGGACGGCGACATGATGGAGGCTGAGGGCGAGCTACACGTGAAGATCAAGCTGGAGCCGGGAGAGATTACCCACATGAAGCATTACATTGGCCGACGGCCCATGATGAAGAAGAAAGCCAGGATCACAGTGCACGAGGTGGATCAGGAACAAGTGATAATGCGTGAAGGAAATGAATTTGCGTGTTTGTTGTGTACTGGGGAGGAAAAAGTTGTTGGAGACATGAAGGGAATAAGCACTCACATGAAGACCGTCCACGGTATCCGTGTATACATATGTGACATCTGCGGTCAGGACTTCCGGAAAAGGAATGAACTCTCTCTCCACTTGGACGATCATGTCGCTGCAGAGGAAGGGGACTTTCAGTGCGAAGTTTGCAATAGGATATTTAGTAACTTACGTTTGTTCCGTGTGCACAAGCGAATGCACTATCCGCAAGCAAAGTTATGGACTTGTGAAACGTGCGGTAAGCGTTACAGCTCACGTAATCTTCTAGACGAGCACATAAATACTCACTTGGGTGTTCGGCCGTATAAGTGCAAACTCTGCAGCAAGGACTTTGCATCTAAATATACATTTAAAGCTCATGCCAAAACCCACGAGGTAAGACCACGGCCTTTTGCTTGCAGCGAGTGTGGTAAATCGTTTCTCAGCCAACAGAATTTAATGCAACATGAACGTACCCATAATGGAATGCGTAACTACGTGTGCGACCAGTGTGGGAAAGCGTTCGGCACAGCTCGCAATCTAGAAGTCCATAGTGTCGTACATTCCGGTTACAAGCCTTTCATATGTCGAACCTGTGGAAAAGCTTTTGCCCGCAAGGCAGAAATTAGGGACCATGAACGCATTCATACCGGGGAGAAGCCTTATCAGTGCGAGTTCTGTGGAGCTACTTTCAGTCAACGAAGCAACCTACAATCACATAAGCGAGCCACCCACTACCAGGATAAGCGCTACAAGTGCATGGATTGCGGAAAAGGCTTCAAGCGCAGACGATTGCTAGACTACCACGTGAAAGCTGCACACACCGGAGAGAGACCCTACAAGTGCCCCATTTGTGAAGCGACCTTTGTGTATCCGGAGCATTTCAAAAAGCACCGTCGCATCCACACCGGTGAGAAACCGTTCCTGTGCGAGGTGTGTGGCAAGGCATTCAACAGCCGGGACAACCGCAACGCCCACCGCTTCGTGCACTCGGACAAGAAGCCGTACGAGTGCCTGGTGTGCGGCACTGGCTTCATGCGCAAGCCGCTGCTGTACAACCACATGCAGTCACAGGGGCACATGAACGACACCATTGTAGTGAACCAGCCCCGGCTGACCAACGAGGATGACGTGCTGACGGCGGGCGACGATGCCGGCGAGGTGGAGATGACCATCGTAGAGGGCTCGGCGGGCCACGACACAGACACCAAGCTGTACATCGCGGAGCTGAAGGAGCACGTGCTGATTCAGGAGGGAGAGGAGGAACACGTGTACTCGGAGAAGCTGGAGGCAGACGAGCACCTGATTATCGATGGCCAGGTGCACTTCGCAGACCCCAGCGAGTTGGCGAGCCTGCACAGGGACGTGGGGTCCATGGCCGAGATCACCACCACTGCGGCGGCCGGCTACCCACAGCACCGTGGAGCTGAGGGCCGTCACGCGCTCGTGGTCCCCGCCACTCCCAACATGCTCTCTGCAGGGGAGATGGCGTACGAGGAGGGAGACGATCAGGGTCAAGAGACCTCCATCATGACTCTGAGCTCGCCTCAGGCAATCCAGACCGCAGGGGGGCCCGTGCACTTGGTGCAGATCAGGATACCCTCCGACCAGAATGGCACCCGCAACTGGTTCAACGCCATTGATAGCTCGCAGTAA
Protein Sequence: MLEPEMTTQVGSEDELNVVPAAQDGDMMEAEGELHVKIKLEPGEITHMKHYIGRRPMMKKKARITVHEVDQEQVIMREGNEFACLLCTGEEKVVGDMKGISTHMKTVHGIRVYICDICGQDFRKRNELSLHLDDHVAAEEGDFQCEVCNRIFSNLRLFRVHKRMHYPQAKLWTCETCGKRYSSRNLLDEHINTHLGVRPYKCKLCSKDFASKYTFKAHAKTHEVRPRPFACSECGKSFLSQQNLMQHERTHNGMRNYVCDQCGKAFGTARNLEVHSVVHSGYKPFICRTCGKAFARKAEIRDHERIHTGEKPYQCEFCGATFSQRSNLQSHKRATHYQDKRYKCMDCGKGFKRRRLLDYHVKAAHTGERPYKCPICEATFVYPEHFKKHRRIHTGEKPFLCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGTGFMRKPLLYNHMQSQGHMNDTIVVNQPRLTNEDDVLTAGDDAGEVEMTIVEGSAGHDTDTKLYIAELKEHVLIQEGEEEHVYSEKLEADEHLIIDGQVHFADPSELASLHRDVGSMAEITTTAAAGYPQHRGAEGRHALVVPATPNMLSAGEMAYEEGDDQGQETSIMTLSSPQAIQTAGGPVHLVQIRIPSDQNGTRNWFNAIDSSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00624156;
90% Identity: iTF_00624156;
80% Identity: -