Druf001708.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- Zfy1
- Assembly
- GCA_947859195.1
- Location
- OX401930.1:6603679-6606343[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0023 0.14 12.8 4.3 2 23 153 175 153 175 0.96 2 19 0.00023 0.014 15.9 0.5 1 23 184 207 184 207 0.97 3 19 0.028 1.7 9.3 0.4 2 23 220 242 220 242 0.97 4 19 0.0005 0.03 14.8 0.8 1 23 251 274 251 274 0.97 5 19 0.00024 0.014 15.9 2.1 1 23 286 309 286 309 0.97 6 19 0.00011 0.0067 16.9 0.7 2 23 338 360 337 360 0.97 7 19 0.0012 0.072 13.7 1.2 2 23 370 392 369 392 0.96 8 19 0.12 6.9 7.4 1.7 3 19 398 414 396 416 0.93 9 19 0.0016 0.097 13.2 1.2 2 21 422 441 422 444 0.94 10 19 0.095 5.7 7.7 2.0 3 23 454 475 453 475 0.96 11 19 0.00068 0.041 14.4 3.5 1 23 480 503 480 503 0.94 12 19 0.00064 0.038 14.5 2.5 2 23 515 537 514 537 0.94 13 19 0.072 4.3 8.0 1.2 1 23 560 583 560 584 0.94 14 19 9.3 5.6e+02 1.4 1.9 2 23 590 611 589 611 0.76 15 19 0.0029 0.17 12.4 1.5 2 23 617 638 616 638 0.97 16 19 7.6 4.6e+02 1.7 2.1 3 23 646 668 644 668 0.90 17 19 7.4 4.4e+02 1.7 1.2 2 23 676 697 675 697 0.83 18 19 0.017 1 10.1 0.1 1 23 704 726 704 726 0.97 19 19 0.072 4.3 8.0 1.9 1 23 732 755 732 755 0.97
Sequence Information
- Coding Sequence
- ATGCAAGTTATTAAAACAGAAATAAAGAAAGAATACGACTCTGAACGGAATGATCCAGCCGAACGGAGAGATCCGACGTCGTTCCTGCCAGAAGAGCCCATGTCTTATGAGATCAAGAAGAAGAAAAAGAAGAAACGCAAGCATCGGGATCAAGAGGATCCTTTTAAGGATATTGATGATAAATTGGGGATCCGGACCGAACCCGTGCTGATAACGATAGACCCAGAAGTCAATATTAAGGTTGAAAATATTGAAGTGGAATTGGATTTCAATGATTTCACGGACAACTCCGGCCTCTTGGTTGAAGGCCCCCACAGGGAAGATAGTCAGGAACAAGCCGTGAAAATTGAAGAATCAAACCATGAAGCAGTCATACTCACTTTTGAGAGTGTCATCAACCAGAAAACCATGTTTGACTACAACGAATCACTGCCTATAGAAGCAGCACCCTCTCGCGTCTGCAAAGTGTGCCATCTAGTCTTCCAATCAAAGAAAACATTACGAATGCACCAGAAAAGAAAACATAAAATATACAGAAAATCTTTCAAACACGTCTGTGATTACTGTGGTATGGCTTACGAAATGAAAAACAGTTTGGCAGCTCATATTAAGAGGAAACACGGACCTGACTCCATGCCAGACGACAGAGAGGAAAGAACGTGCGACATTTGCGCTCTAGTCTTCAAAGGCATGCCACGTTTAAGAATGCATATGAGACGAAAACATGGCTGGTTTGAAGAATCCTTCACGCATGTTTGCGAAGAATGCGGTCTGACTTATGATAAATATAGAAGTCTTATCGTCCATATACAAAGGAAGCATTCAAATCATAAAAAGCCAGAGATCAACCAGTGGTATAACTGTCCGTTCTGTCAGAAGATATTCACTAAGAGAGAAACTTATGCCAGGCATGTGCAAAGGAAGCACCAAGTCTCAGAAGAGACGATAAAGCAAGAAAATCTCACCCAAGATTACTTGCAGAGCTGTACCAACGAGCAAACTGGGGAAATAACTTGCAAAGAATGCCCTTTAGTATTCTCTTCGGTCAATTTCTTAAAACTACACATGCGTAGGAAGCATAACGCACTGAGAGAGGACTTTCGATTGAAATGTAGGATCTGTAATCTGTCTTATGATAAAATTGAGAGCCTCAAGAGGCACGTAAGAAGAAAACACGACCAAGGATCGCATTGTGAGGTGTGTAACAAGCAATTTGATACAAGAGAAATGTACTTAAACCATTCACATGCTAAAGTCATTAGGGAGTGTCATCTCTGTGGCCTCATTTTCGCGTCCCAAGGTGGTTTAGCAAAGCATTTGAGGTGTACGCACAAAATTGACAGCCCGAAAACCGTTTTCTGCAATCTATGCAATGAAGGGTTCCACGATAAGCGACAGTTGAAACCACACTACATGAAAGTGCATTTAAAAGTGTCATATACATGTAGATATTGCAAAAAAATCTTCAAAGCCAAGGAGAGTTATCGTCGACACATTCTATTCAAACATCCTACAGCGAATCATGTAATAACGCAGATGCAGAAATGCGAACAGTGCACAGAGACGTTCAAGGATGAATTCGAATTATGTAAGCACATAAACTTCGCGCATAGACACAGCGAGAACGATAGTAAACCAATCGAAGTAAAAAAAGAGGAAGGCGATACAAAGGATACGTTTAGATGCACCAAATGCCCAGAAATTTACTTGACATGGGAAATGTTGAGATTGCATTACGAGCAAAATCATCATAACATCCAAGACACTCAGTGCCAGATATGTGGGGAAATAATGCCAGGGAATGAGCTCCAGAAACACATAAAAAGTACCCACACAGATACAGAAATGCAGTGTAAATATTGTGAATTTAAAACCAACGTAAAAGTGTCTCTAACACAGCACATGCTGAGGCATAAAAACGCGAGAACGATGCATTGTGAATACATGGGATGTAAATATAAAACGTTTTACGAGGTCGCTATGGAGAAACACAAGCGGAGACATGCAGATTTGGGAGTCAAACTTCAATGCACACATTGTCCATTCCAGACTATGAATAAATATATATTGAAATACCATGAGGAAGCCCACGAGACTGGGAAAAAGAGGTATATGTGCGATCAATGTGATTATGCGACCATATTACCTGCGAATTTGGTGCAACACAAGTATAAACATTCAACGGAGAAAAGGTTTAAATGTGAGGTTTGTCCGTTTGCAACAAAGTACAATACGTCGTTGAGGTTTCATGTCAGAAAGAAACACTGTGATCTTCCAACATTCAGTTAA
- Protein Sequence
- MQVIKTEIKKEYDSERNDPAERRDPTSFLPEEPMSYEIKKKKKKKRKHRDQEDPFKDIDDKLGIRTEPVLITIDPEVNIKVENIEVELDFNDFTDNSGLLVEGPHREDSQEQAVKIEESNHEAVILTFESVINQKTMFDYNESLPIEAAPSRVCKVCHLVFQSKKTLRMHQKRKHKIYRKSFKHVCDYCGMAYEMKNSLAAHIKRKHGPDSMPDDREERTCDICALVFKGMPRLRMHMRRKHGWFEESFTHVCEECGLTYDKYRSLIVHIQRKHSNHKKPEINQWYNCPFCQKIFTKRETYARHVQRKHQVSEETIKQENLTQDYLQSCTNEQTGEITCKECPLVFSSVNFLKLHMRRKHNALREDFRLKCRICNLSYDKIESLKRHVRRKHDQGSHCEVCNKQFDTREMYLNHSHAKVIRECHLCGLIFASQGGLAKHLRCTHKIDSPKTVFCNLCNEGFHDKRQLKPHYMKVHLKVSYTCRYCKKIFKAKESYRRHILFKHPTANHVITQMQKCEQCTETFKDEFELCKHINFAHRHSENDSKPIEVKKEEGDTKDTFRCTKCPEIYLTWEMLRLHYEQNHHNIQDTQCQICGEIMPGNELQKHIKSTHTDTEMQCKYCEFKTNVKVSLTQHMLRHKNARTMHCEYMGCKYKTFYEVAMEKHKRRHADLGVKLQCTHCPFQTMNKYILKYHEEAHETGKKRYMCDQCDYATILPANLVQHKYKHSTEKRFKCEVCPFATKYNTSLRFHVRKKHCDLPTFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01426137;
- 90% Identity
- iTF_01073853; iTF_01179733; iTF_01180578;
- 80% Identity
- -