Druf016129.1
Basic Information
- Insect
- Drymonia ruficornis
- Gene Symbol
- -
- Assembly
- GCA_947859195.1
- Location
- OX401916.1:12959824-12966198[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-11 3.9e-08 32.9 0.0 4 39 154 190 151 194 0.89 2 4 2e-12 3.5e-09 36.3 0.1 3 39 207 243 205 247 0.92 3 4 1.5e-15 2.6e-12 46.3 0.2 2 45 261 305 260 305 0.96 4 4 9e-19 1.5e-15 56.6 0.1 1 42 312 354 312 357 0.95
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGCCTGCCGACGGTGAAGCGCGAACCGGTATCGGACGAAGAAGATAGCAATTCACAAATTGCACATAGTTACTTGTCCATTCAGCAGGGTGTCGCGGGGGTGGGTGCGGGCGGGCTGGAGGCGCTGGCGCCGGCGGGCCCGGCCGCCACGCCGGTGTGCGTCAAGCACGAGCGCGGCTCCCCGCCGCCGCCGCGCTCGCTGCAGACCCTGCGCCCGGCGCCCGCGCCGCCGCACGCCAAGGGCAGTACCCTGCTCGGTAGACACATGGGTCTACTGAACGCAGCTGAAGTGCCCGACTCCACGGACTTCATACCGCTGCTGACTGTGAAAGACGAGCCGCTATCAGAAGGAGAGCAGCAACAGTTGAGCGGCGAGGACACGAGCGACTCGTCGGGCAGGCAGGCGTCGCCGGCGCTGCGGGCCAGCCCCAAGAGCTGGACGCAGCGCGACATGGAGTGCGCGCTCGACGCGCTCAGGACTCATCAGATGAGTCTCACCAAGGCGTCGGCGGCGTACGGCATCCCGTCGACGACGCTGTGGCAGCGCGCGCACCGGCTCGGCATCGACACGCCCAAGAAGGAGGGCGCGGCCAAGTGCTGGCGCGACGCGGACCTGCGTGCCGCGCTGCACGCGCTGCGCGCCGGGGACCTCTCCGCCAACAAGGCCAGCAAGGCATACGGTATACCCAGCAGCACGCTGTACAAGATAGCGCGGCGCGAGGGCATCCGGCTGTCAGCGCCGTTCAACGCGGCGCCGACCGCGTGGCGCCGCGCCGACCTGCAGCTGGCGCTGGCCGCCATCCGCGCCGGCGCCGCCTCCGTGCAGCGCGCCGCCGCGCAGTACGGGATACCCACCGGAACGTTGTACGGGAGATGCAAGCGAGAAGGCATCGAGCTGTCCCGCTCCAACCCGACGCCGTGGTCGGAAGACGCCATGGGAGAGGCTCTCGAGGCAGTGCGGGTGGGTCAGATGTCAATAAACCAGGCGGCAATACACTACAACCTGCCCTACTCCTCGCTGTACGGCAGGTTCAAGAGGTGCAAGTATCAAATACAGGCCGTCCAACAAACAGAGCAGGATATCCCTAAACCCAATGAAATCGACAACCAAAATCTACCGAACGACATTCAGTACTACCAACAGCTACCACATAGCAACCAGCATCACTCGGAACAAAACATACATCCATACACGCATCCATCGCTGGCGTACCAAGCGGAGAGTCCGCAGGAGCAGTACGGACCGGCGATGTACTACAGCGCGAGCTGCAGCGTCGCCACCAGCTGA
- Protein Sequence
- MPGYGLPTVKREPVSDEEDSNSQIAHSYLSIQQGVAGVGAGGLEALAPAGPAATPVCVKHERGSPPPPRSLQTLRPAPAPPHAKGSTLLGRHMGLLNAAEVPDSTDFIPLLTVKDEPLSEGEQQQLSGEDTSDSSGRQASPALRASPKSWTQRDMECALDALRTHQMSLTKASAAYGIPSTTLWQRAHRLGIDTPKKEGAAKCWRDADLRAALHALRAGDLSANKASKAYGIPSSTLYKIARREGIRLSAPFNAAPTAWRRADLQLALAAIRAGAASVQRAAAQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQIQAVQQTEQDIPKPNEIDNQNLPNDIQYYQQLPHSNQHHSEQNIHPYTHPSLAYQAESPQEQYGPAMYYSASCSVATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01073526;
- 90% Identity
- -
- 80% Identity
- -