Dcan023857.1
Basic Information
- Insect
- Drusilla canaliculata
- Gene Symbol
- lrrfip2
- Assembly
- GCA_027574885.2
- Location
- JAODGA020064238.1:5258-7583[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.32 8.8e+03 -3.7 0.2 35 60 13 37 2 52 0.46 2 3 2.2e-109 6e-105 351.4 30.2 1 300 145 441 145 441 0.92 3 3 0.016 4.4e+02 0.5 4.5 120 170 439 489 438 510 0.85
Sequence Information
- Coding Sequence
- ATGCAGCGGGAAGTGAATACGCATTCCGCTCCACCTAATCGGCAGATAAGCGAGCAAATAGAAAATGACGCGGCGGTGAAAACAACGTCTGCAAGTCGTAGCAGCACCACCGTCGAAGGTGGTGTCGAATGCGATCGTCGTGGAGCGATGGGTCAGACGAATGGAAAACCGCACGTCGATCGCGCCGCGCAAACGCTCCCTAATGAAGACGCGAGGGCAACAAAAGGAAGCGCAAGTGGTGCGCTAGAAAAACAATTGGCCGGCGGCCAAGAGCGCGACGTTATTTCGAACGCTGCAATCGGCGACGCGACCGCGACCGATAACGGCGGTCCACCGCCACCGCAGTTGGTGGATTTTCATCAGGCGGATGCGCGCAACGCCGTCGACGACGATCGCTGCGTGGAGCAGTATTTCGCAAGCGAACGAGATGATGCCGAGGCGCGACTATTGGCACGACGCGCCGCACGGGCGGAGGCGCGCGAAATTCGCATGCGAGATCTGGAGCGGCAGCAGCGTGAGCAGGAGGAGAACGCCGACCGACAGTTTGACATGCTCAGCGAGCCGACGCTGCGGCGGCCGGTGGCCACCGCCAGCAGCCGCTTCCTGTCGTCGCGACGCTCGTCGGAGGACTCGCTGGAGGACACTGGCAGCCTGCGCGATCTCAGACATGAGCTCAAGGAGGTCGAGGAGAAGTTCCGCAAGGCGATGATAGCGAATGCCCAATTGGATAATGACAAAGCGGCGCAAACTTATCAATTGGAACTGCTTAAAGATAGgcTAGAAGAATTGGAAGAGGAACATTCACAAGTGAAGCGCGAGCACAAGGACAAGTGTCGCGATTTCGAGCAACTGAAACGGGTAACGGCACAGCTCAAGGACGAGTTGGCTCTCTTCAAGGCCGAATTGGACGAGCGTGATCGGTTGATCGCCGAAAAGGGGCTGGTGATTGTCGCCGCCGACGATGTGGACGGGGAGGCTGGGCTGACGAACGGACCGACAAGCTCGACGGCGTCACCGGCGCCTGTGAAAATACGACGTGCGCTTGTGAGCGCTGAGAATGCGCACCTTTTGGAGAACGCTGGCGAGGGAAGCTTAGATGTGCGGCTCGCACGCTTTGCCACCGAACGCTCGGATCTGCTGGACCAAATTAGCCATCTCAAGCTGGAGCTGGAGGAGGAGAAAAGTTCCAAGCGGAGAAAGAACAGCAGCGCTTTAAATGGACCCGATTCGGATAGTGATGCAGCCGATATTCAACGTGAGGCTAGCAAACAATTGGCCGAATTCAAGTTTCGAGCGCAGAAGGCCGAGCAGGATGTGGCCACCATGCAGGCGACTGTTGCGCGGCTTGAGAGTCAAGTGATCCGATATAAAACCGCCGCGGAGACGTCAGAGAAAAGCGAAGAGGCGCTCAAGGCGGAGAAACGCAAACTACAACGAGAGGCGAGGGAAGCTCAGGGTAGAGCTGAAGAGTTGGAAGTGTCCAACACGCACCTTATCAAGCGGCTGGACAAGCTCAAGAACGCTAAGTCGGCGCTGCTCAAAGAGCTGTGA
- Protein Sequence
- MQREVNTHSAPPNRQISEQIENDAAVKTTSASRSSTTVEGGVECDRRGAMGQTNGKPHVDRAAQTLPNEDARATKGSASGALEKQLAGGQERDVISNAAIGDATATDNGGPPPPQLVDFHQADARNAVDDDRCVEQYFASERDDAEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMLSEPTLRRPVATASSRFLSSRRSSEDSLEDTGSLRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHSQVKREHKDKCRDFEQLKRVTAQLKDELALFKAELDERDRLIAEKGLVIVAADDVDGEAGLTNGPTSSTASPAPVKIRRALVSAENAHLLENAGEGSLDVRLARFATERSDLLDQISHLKLELEEEKSSKRRKNSSALNGPDSDSDAADIQREASKQLAEFKFRAQKAEQDVATMQATVARLESQVIRYKTAAETSEKSEEALKAEKRKLQREAREAQGRAEELEVSNTHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -