Basic Information

Insect: Drosophila yooni
Gene Symbol: RREB1
Assembly: GCA_035043035.1
Location: JAWNNG010000885.1:9860-16715[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.036 2.3 8.8 0.8 1 21 252 272 252 274 0.93

2 13 0.00034 0.022 15.2 0.2 1 23 284 306 284 306 0.98

3 13 0.00025 0.016 15.6 7.2 1 23 312 334 312 334 0.98

4 13 0.88 57 4.4 1.5 2 20 528 546 528 548 0.93

5 13 0.017 1.1 9.9 0.2 1 23 692 714 692 714 0.97

6 13 6.9e-06 0.00045 20.5 1.2 1 23 724 746 724 746 0.99

7 13 0.00083 0.054 13.9 2.0 1 23 752 775 752 775 0.97

8 13 0.003 0.19 12.2 2.0 1 23 1044 1067 1044 1067 0.95

9 13 8.6e-05 0.0056 17.0 0.3 2 23 1451 1472 1450 1472 0.97

10 13 0.15 9.5 6.9 6.3 1 23 1478 1501 1478 1501 0.97

11 13 9.4 6.1e+02 1.2 3.4 1 23 1621 1644 1621 1644 0.78

12 13 0.065 4.3 8.0 0.6 3 23 1704 1724 1702 1724 0.96

13 13 0.0013 0.087 13.3 4.8 1 23 1730 1752 1730 1752 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.036	2.3	8.8	0.8	1	21	252	272	252	274	0.93
2	13	0.00034	0.022	15.2	0.2	1	23	284	306	284	306	0.98
3	13	0.00025	0.016	15.6	7.2	1	23	312	334	312	334	0.98
4	13	0.88	57	4.4	1.5	2	20	528	546	528	548	0.93
5	13	0.017	1.1	9.9	0.2	1	23	692	714	692	714	0.97
6	13	6.9e-06	0.00045	20.5	1.2	1	23	724	746	724	746	0.99
7	13	0.00083	0.054	13.9	2.0	1	23	752	775	752	775	0.97
8	13	0.003	0.19	12.2	2.0	1	23	1044	1067	1044	1067	0.95
9	13	8.6e-05	0.0056	17.0	0.3	2	23	1451	1472	1450	1472	0.97
10	13	0.15	9.5	6.9	6.3	1	23	1478	1501	1478	1501	0.97
11	13	9.4	6.1e+02	1.2	3.4	1	23	1621	1644	1621	1644	0.78
12	13	0.065	4.3	8.0	0.6	3	23	1704	1724	1702	1724	0.96
13	13	0.0013	0.087	13.3	4.8	1	23	1730	1752	1730	1752	0.99

Sequence Information

Coding Sequence: ATGCTcgccacacagcagcagcaacagcaacaatcgcacacagcagcagcaactgcagcagcaacacaagaGGATGCTCGGGATTTGGGCTTAATGGAGACGCGACAACGTCGCGATTCGAGTACCTCAGAATCCTCGCTGGAGCATTTGGATTTAAGTCGCACGCCCAAAaaattgagcagcagcagtggcgcACCGCAGCCGACGTCGACGCCGCACGACACAGCAGTGACAGCGACGTCGCGCAAGCGAAAACTgcgacagcaacaccagcagcagcagcagcaacagttgccgctcTCCGatgaggagcaacagcagcaacagcagcagcagctgttggatTCGTCAGCGCAGCGACCGCCGCGAGCGGACGACGCCAGCTCGCTGCGCAAAAAGTTTCGACTGAAtcgcagcagcgccagcggcAATGCCGCCAACGGTGATTTATCCGAGTCTGGCTTTGTTGATGGCAGCGCCGTCAGTGGCTATCTgcttagcaacaacaacaataacaacaacaataacaacaacaacaataacaacaacaataacaacaacaataacaacaacaataacaatatcaacaacaatatcagtagtagtagcagcagcagcgcagtcgctcagtcagcagcagcagcagcgtcggcaGCGCAGCATGCGTCAAGCGTTAGCAGCTCGGGCGGCTCCTCGCCACAGGGCCTCTCGAGCGCCGAGTCGGGCATCGGTGCTGGTGATGAGCACATGAAATATCTGTGCCCCATCTGCGAGGTCGTCTCGGCCACGCCCCACGAATTCACCAATCACATTCGCTGCCACAACTACGCCAACGGCGACACCGAGAACTTCACCTGCCGCATCTGCTCCAAGGTGCTCTCGTCGGCATCCTCGCTGGACCGGCATGTCCTGGTGCACACTGGAGAGCGTCCGTTCAACTGTCGCTATTGCCACTTGAACTTCACAACCAATGGGAATATGCACCGACACATGCGCACCCATAAGCAACATCAGgcttcgcagcagcagcagcagcagccctcgcaacagcagcaatcaacccaacagcagcaacagccacaatcgcagtcgcagcaacagcaacagcggcgccAGCAACATGCGGGCGGAGCAGGCGCAACTGGCTCGGGATCGGGATCGGGTTCAGCACAGTTGTTGACGACGCGAGCGGAGAGCTATGAGAGTGATGCCAGCTGTTCGACGGATGTGTCCAGTGAGCTGAAcagtcacagcagcaacagcaatcaatccaaccacaacaacaacaacaatagccacaaaacgaacaacaataacaacaataataataataataataataacaatgaggATGAGCTCGAGCTGGAGGATGAGCAGCTAGTATtgagcagcaaacagcgacGCCTCAAGGCAAccctaaacaacaacaatataattaGGGATGAGGAGCAGGAGAATCGTGTGGATGATGATTCAGATGTGGACAGCGTTGAAAAGCTGCCCGCCTGCAATTCGGGTGAATTTGAATCTGTGCCAGCGTTGTGCGCCCATCTGGATGCCGAGCATGGGGACATACCGGCCAAGTGTCGCGAGTGTGAGGTGATCTATGCCACACATCGACAGCTGCAGGCGCACAGCTGTCGCGGATTGCCGCCGCTGCTTGGTGCGAGCTCATCGCCACTGCACAAGCAGGAGGAGAGCGAAttggaggagcagcagcagcagcacgaggAGGACCACgaacagcagcacaagcaggaGGAACAGGAGCACGCCGAGCAGCGCGAATGTGAAGATTTCTTTCAGCAGCTGTATCTGAAGAATAAATCGTCAGCAACGCTTCTTCCCTCCCCGATCAAACATGAGCCGGCGGACCAGCGACAGGATCTGGCCGATATTCAAAGCATACTCAATATGACCAGTTCCAGCTGCACATCCAGTTTCCTGCGCAATTTCGAGCAGTCGGTGAACACGCCCTGCTCCAGCCAATACAGCGTCGATGGACGCGATGGCGAGGAGGAGGCCCAGGATGCCTTCACCAATGAATTCCGCCGAATGAAACTGCGCGGTGAGTTCCCCTGTAAGCTGTGCAGCGCGGTCTTTCCCAATTTGCGGGCACTCAAGGGCCACAATCGCTACCATCTGTCGGAGGTGGGCGCCGCGGGTCCATTCCGTTGCAACATGTGTCCCTATTCCGTCTGCGACAAGGCGGCGCTCGTCCGGCACATGCGCACCCACAACGGTGATCGGCCATACGAGTGCGCCGTCTGCAACTATGCCTTCACCACCAAGGCGAACTGTGAGCGGCATTTGCGCAATCGTCATGGAAAGACCAGTCGCGAGGATGTGAAACGTGCGATTGTCTATCATCCGGCCGAGGATGCCAGCTGCGAGGAGAACAAATCCCGGACCGATGCCGATATGCTAACCGAGCTGAGCGGCTATCGCTGTCCTACACCCACTGAGCAAAGCTCCTCGGCTAGCTCCTCGTCACAGCTGAAGCATATGTTGCTGGCGGAGCCGACGCCGGCCGTAAaggtaacagcaacagtggcagcaacaacatcgctGCCGCAACAACCGCTCAAGATTCAAGTGAAGAGCTTGGATCAGCTGGTGGATAAGCCACTGCCTGCACTCGATCTCAGCATGGATGCGCTCGACCTGAGCAAGAAGCCCGCACAGCTGCTGGCCGAGCAAAGGGAGCAAAGGGAGCAGCTCGAAAGACAcgaattgctgctgcagcagcaacaccaacaacagcagcaacaacaccagcaacaacaccagcaacaacagcagcagcaacaaatgttcGGGGCTGGCGATGCAGCTGCTCAGTAtatgcaacagctgttgcGCAGCTTTATGCTCCAGCAGGCACCCGGTTTTCCCTTCTTTGGCTTTCTCacgccaccgccaccagcaacggcagcagcagcaacagcagcagacaagtcaatgccaacaaatccagcagcagcagccggggcaacagcagcaacaattgctgcaatGCCACTGTCGCTGCCCGTGCCACTGCCCGCTGGTGGTCCCGTCAAGATGGTCATCAAGAATGGCGTCCTGATGcccaagcagaagcagcgccGCTATCGCACCGAGCGTCCCTTTGCCTGCGAGCACTGCTCGGCCCGCTTCACGCTGCGCTCCAACATGGAGCGGCAtgtgaagcagcagcatccacagtTCTATGCGCTGCGCCAGCGACACCGCAGCGGTCATCATGTGATGCGTGAACGGGCTGCGTCCTCGAGTGCTGTCCAAGCGGCAGCCGCTGctcaggcagcagcagcagctgccgcagcaatGAATAAtctcagccagcagcaacagttgcagcagcaacagttgcagcattcacattcacatcaCGTCCATGCACCAATTTCGGAGCAGGTGAAATATGCGATTTTGGCGCAGCAATTGAAGGCGCGCAAGGATACGGATTTGTTGCAACAGGCACTGGCACATGGCTCCAGCAGTGTTGTCGCCAATCCGCTGCTGAATTttagctacaacaacaacggcaacagcaacaagcagcatcagcaacaacagttgggCAACAACACTGGCAACTCTTTGGTGATGGACGATGATGAGCCGCCCAAGCTGATTATTGACGAGGATGACGAGGATGTGGAGGGAgaggacgatgaggatgaggaggaggagcaggaatTTGATGTCgatgaggaggagcaggaggatgAAGAGATGGACTTGGACGatgagcatcagcagcagccgcacgaggaagatgacgatgacgatgatgatgatgctgatgctgccgcagcagcagcagcagcaacagaggcatcgcaacaacaattgcagccaaCAAAGGACAAACTTCAATCCAAGCCAATTGAGGCGGCCAAAAAGGTAGCGGAAACCATATTGGAGCAGGCAATCAAAGAGCGCGAGGAGAAAGCCGAGAAGCAGCCGCATACTCAAGCGGAGTCCCTGGGCGGCAATAAGCCGGcgacgccaacaacaatgaaaacaatgatTGCACAAGCGGAATCGGTGGCCAAGTCCTTGAAGGAGGTGGCCAGTTCACCGTTTAAGGATGAATCTCAGGATCTGGTGCCGGTGGCCAAACTGGTGGACAATGCCACCAGCAATCAGGTGTCCTTCAACAGCTATTTCCGTCCCAGCGACGTTGCCAATCACATGGAGCAGAGCGACGAGGAGGGTCTCGTCGCCAGCGGCAGCGCCAGCGAGAGCAACAATTCCGGCACCGAGGAtgtgaccagcagcagcagcagctgcggcaacGATACCAAAAAGAAATCCGCCTACAGCCTCGCACCGAATCGTGTCAGCTGCCCGTATTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTGCGTCGCCACATCCTGACACACACCGGCCAGAAGCCGTTCAAGTGCTCCCACTGCCCGCTGCTCTTCACCACAAAGAGCAACTGCGATCGCCATCTGCTGCGCAAGCATGGCAACGTTGAATCTGCCATGTCCGTCTATGTGCCCACCGAGGATGTCAGCGAACCGATTCCCGTGCCCAAGTCGGTCGAGGAGATTGAGCTCGAGGAGCAGCGACGTCGCCAGGCGGCCGAGGCCGAACAGGCCGAGCGGGAGCAGCGCGAGCGTCAAAAGGAGCGCGAACgtgaactggaactggaacgggaacgggagcgGGAACAGCAACATTTGATACAACAGTATCGCCAACAAAtggccgctgctgcagcggctgctgctgccgttgctgctgtcgctgcaccAGCGCATCCAACACCACCACAGCCAGCCCAATCGCCACCGGGCCTGGAAGCGAGCAGTGATCTGCCCTATAAATGCCATCTTTGCGAATTCTCGTTTGGCGAGCGGCTGCAGTGCCTCGAGCACATCAAGCAGCTGCACGCTCACGACTTCGCACTGCTCCTGGCCAAGGGGGCCATCGAAACGGATGCACAAgtgcagcatcaacagcagcaacagttgccaatgGCCGGTGGTGCTCCACATTCGGATGATGAGGCTGCTGCCGTCGGCACCAGATCGGGCAAATATCCCGACTATAGCAATCGTAAAGTGATTTGCGCATTTTGCGTGCGTCGCTTCTGGTCAACGGAGGATTTGCGCCGACATACGCGCACTCATTCCGGTGAGCGGCCGTTCCAGTGCGAGATCTGCTTGAGGAAGTTCACATTGAAGCACAGCATGCTGCGACACATGAAGAAGCACAGTGGACGCAGTCACAATGGTGGCGAACTCGATCATCAATCCGATTGCTCCGATGATGAGCAACTaacaacaacaacaacaataacaacaacaatagcaatagtAACAGCAAGCAGGATGCTGCGCGAGCTGCTCGGCAAGGCGAACGAGTGGCGAGTGAGTCGCCTGGGTGAGCAAAAGGAGAACATTGccgaggcaacaacaacaccctcagcagcaacagcagcagcggcagcaacagctgcagcagcagcagcggcggcagcagcagctgtagccAGTGGCGATCTAATTGGTAATCTGTTAGGGATCAGTGATCAGGGCATACTAAACAAGCTGCTCTCCTCACCGGACGAAGCTGCCAAGCTGCTAGGCGTGGAGAAGTAA
Protein Sequence: MLATQQQQQQQSHTAAATAAATQEDARDLGLMETRQRRDSSTSESSLEHLDLSRTPKKLSSSSGAPQPTSTPHDTAVTATSRKRKLRQQHQQQQQQQLPLSDEEQQQQQQQQLLDSSAQRPPRADDASSLRKKFRLNRSSASGNAANGDLSESGFVDGSAVSGYLLSNNNNNNNNNNNNNNNNNNNNNNNNNNNINNNISSSSSSSAVAQSAAAAASAAQHASSVSSSGGSSPQGLSSAESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCRYCHLNFTTNGNMHRHMRTHKQHQASQQQQQQPSQQQQSTQQQQQPQSQSQQQQQRRQQHAGGAGATGSGSGSGSAQLLTTRAESYESDASCSTDVSSELNSHSSNSNQSNHNNNNNSHKTNNNNNNNNNNNNNNEDELELEDEQLVLSSKQRRLKATLNNNNIIRDEEQENRVDDDSDVDSVEKLPACNSGEFESVPALCAHLDAEHGDIPAKCRECEVIYATHRQLQAHSCRGLPPLLGASSSPLHKQEESELEEQQQQHEEDHEQQHKQEEQEHAEQRECEDFFQQLYLKNKSSATLLPSPIKHEPADQRQDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSQYSVDGRDGEEEAQDAFTNEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRYHLSEVGAAGPFRCNMCPYSVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREDVKRAIVYHPAEDASCEENKSRTDADMLTELSGYRCPTPTEQSSSASSSSQLKHMLLAEPTPAVKVTATVAATTSLPQQPLKIQVKSLDQLVDKPLPALDLSMDALDLSKKPAQLLAEQREQREQLERHELLLQQQHQQQQQQHQQQHQQQQQQQQMFGAGDAAAQYMQQLLRSFMLQQAPGFPFFGFLTPPPPATAAAATAADKSMPTNPAAAAGATAATIAAMPLSLPVPLPAGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYALRQRHRSGHHVMRERAASSSAVQAAAAAQAAAAAAAAMNNLSQQQQLQQQQLQHSHSHHVHAPISEQVKYAILAQQLKARKDTDLLQQALAHGSSSVVANPLLNFSYNNNGNSNKQHQQQQLGNNTGNSLVMDDDEPPKLIIDEDDEDVEGEDDEDEEEEQEFDVDEEEQEDEEMDLDDEHQQQPHEEDDDDDDDDADAAAAAAAATEASQQQLQPTKDKLQSKPIEAAKKVAETILEQAIKEREEKAEKQPHTQAESLGGNKPATPTTMKTMIAQAESVAKSLKEVASSPFKDESQDLVPVAKLVDNATSNQVSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSCGNDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQAAEAEQAEREQRERQKERERELELEREREREQQHLIQQYRQQMAAAAAAAAAVAAVAAPAHPTPPQPAQSPPGLEASSDLPYKCHLCEFSFGERLQCLEHIKQLHAHDFALLLAKGAIETDAQVQHQQQQQLPMAGGAPHSDDEAAAVGTRSGKYPDYSNRKVICAFCVRRFWSTEDLRRHTRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGRSHNGGELDHQSDCSDDEQLTTTTTITTTIAIVTASRMLRELLGKANEWRVSRLGEQKENIAEATTTPSAATAAAAATAAAAAAAAAAAVASGDLIGNLLGISDQGILNKLLSSPDEAAKLLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00535518;
90% Identity: iTF_00525357;
80% Identity: -