Dyak012023.3
Basic Information
- Insect
- Drosophila yakuba
- Gene Symbol
- pnr
- Assembly
- GCA_016746365.1
- Location
- NC:16354540-16360985[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 1.7e-14 53.5 3.2 1 34 175 207 175 209 0.97 2 2 8.7e-19 1.5e-15 56.9 6.7 1 35 232 265 232 266 0.98
Sequence Information
- Coding Sequence
- ATGGGCATCTTACTGAGTGATGGCGATTCCACCTCGGATCAGCAGTCGACACGCGACTATCCTCACTTCAGCGGCGATTATCAGAACGTGACGCTGCCGGTGGCCTCTGcttccacatccgcatccgcatccgcctccgcctccgcttCTGCAACCCACGCCGCCGCCGTAAAGATGTACCACAGCAGCGCCGTTGCGGCATACACAGATCTGGCTGCCGCCGGGAGTGCGGCTAGCGCCGGAGTCGGAGTCGGGGTGTCCGGCTATCACCAGCAGGCGGTGAACGCTCCGGTTTACGTGCCATCCAACCGACAGTACAACCACGTGGCCGCGCATTTCGGAAGCGCTGCGGCGCAGAATGCCTGGACCACGGAGGGATTTGGATCGGCCCATGCACAGTTCTACCCTCCAAACGCCGCCGTGATGATGGGCTCGTGGCGCAGTGCCTACGATCCGTCGGGATTCCAGCGATCCTCGCCCTACGAGAGCGCCATGGACTTCCAGTTCGGCGAAGGACGCGAGTGCGTCAATTGCGGCGCCATTTCCACTCCTTTGTGGCGGCGGGATGGAACCGGACACTACCTGTGCAACGCCTGCGGACTGTACCACAAGATGAACGGAATGAACCGGCCGCTGATCAAGCCTAGCAAGCGCCTGGTGAGTGCAACTGCCACCAGGAGGATGGGCCTGTGCTGCACCAACTGCGGCACCCGAACCACCACACTGTGGAGGCGCAACAACGATGGCGAACCCGTGTGCAATGCCTGCGGATTGTACTACAAATTGCACGGTGTGAACAGACCGCTGGCCATGAGGAAGGATGGCATCCAGACCAGGAAGCGAAAGCCCAAGAAAACAGGCAGTGGTTCTGCGGGAGGAGCGGGCACGGGATCCGGAACAAGCTCCACCTTGGAGGCCATCAAGGAGTGCAAGGAGGAGCATGATCTCAAACCCTCGCTCAGCTTGGAGCGCCACAGCCTCGGTAAGCTGCACACGGATATAAagagcagcaccagcagcagtagcacCTTGATGGGACATCACAacacgcagcagcagcagcagcaacagcagcaacaacagcaacagcagcagcagcaatcggCACACCAGCAATGCTTTCCCCTCTACGGACAGGCGacgacgcagcagcagcaccagcaacatgGCCACAGCATGACTCCATCCTCTGGACAGGCACAGTTAAGTGCCCGCCAGCTTCACGGAGCGGCAGGAACGCAGCTCTACACGCCCGGCAGCAGTTCCGGCGGAGGCAGTGCGTCTGCCTACACATCGCACAGTGCGGAGACGCCGGCCCTGAGCAACGGAACTCCCTCGCCCCACtaccagcaccaccaccacctcggCGGATCCCATGGACACCATGTGACGGCAGCGGCGGCACATCACCATTTCCatgccgccgccgctgtcGCCGCTTACGGAGTGAAGACGGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTATTTCGGCGGCACCTTCGGTGCGCTCGGAGGAGCTGCATCCACAACGGCCATGGCAGGCGGAGCGGCCAGTGAACTGGCAGGCTACCATCACCAGCACAACGTCATCCAGGCAGCCAAGCTGATGGCCACCTCGTAA
- Protein Sequence
- MGILLSDGDSTSDQQSTRDYPHFSGDYQNVTLPVASASTSASASASASASATHAAAVKMYHSSAVAAYTDLAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTEGFGSAHAQFYPPNAAVMMGSWRSAYDPSGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAGGAGTGSGTSSTLEAIKECKEEHDLKPSLSLERHSLGKLHTDIKSSTSSSSTLMGHHNTQQQQQQQQQQQQQQQQQSAHQQCFPLYGQATTQQQHQQHGHSMTPSSGQAQLSARQLHGAAGTQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHYQHHHHLGGSHGHHVTAAAAHHHFHAAAAVAAYGVKTEASATNYDYVNNCYFGGTFGALGGAASTTAMAGGAASELAGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597017;
- 90% Identity
- iTF_00592751; iTF_00540026; iTF_00505064; iTF_00592050; iTF_00597017; iTF_00605232; iTF_00548455; iTF_00581929; iTF_00505770; iTF_00537164; iTF_00603000; iTF_00578939;
- 80% Identity
- -