Dere012611.1
Basic Information
- Insect
- Drosophila erecta
- Gene Symbol
- pnr
- Assembly
- GCA_000005135.1
- Location
- CH954181.1:11386658-11388241[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-18 1.2e-14 53.7 3.2 1 34 117 149 117 151 0.97 2 2 4.3e-19 9.9e-16 57.1 6.7 1 35 174 207 174 208 0.98
Sequence Information
- Coding Sequence
- ATGTACCACAGTAGCGCAGTTGCGGCATACACGGATCTGGCTGCCGCCGGGAGTGCGGCTAGCgccggagtcggagtcggggTGTCCGGCTATCACCAGCAGGCGGTGAACGCTCCGGTTTACGTGCCATCCAACCGACAGTACAACCACGTGGCCGCGCATTTCGGAAGCGCTGCGGCGCAGAATGCCTGGACCACGGAAGGATTTGGATCGGCCCATGCACAGTTCTACTCGCCGAACGCCGCCGTGATGATGGGCTCGTGGCGCAGTGCTTACGACCCGTCGGGATTCCAGCGATCCTCGCCCTACGAGAGCGCAATGGACTTCCAGTTCGGCGAGGGACGCGAGTGCGTTAATTGCGGCGCCATATCGACACCTTTGTGGCGACGGGATGGAACCGGACACTATCTGTGCAACGCCTGCGGACTGTACCACAAGATGAACGGAATGAACCGGCCGCTGATCAAGCCTAGCAAGCGCCTGGTGAGTGCAACTGCCACCAGGAGGATGGGGCTGTGCTGCACCAACTGCGGCACTCGAACCACCACACTTTGGAGGCGCAACAACGATGGCGAGCCCGTATGCAATGCCTGTGGATTGTACTACAAATTGCACGGGGTGAATAGACCGCTGGCCATGAGGAAGGATGGCATCCAGACCAGGAAGCGAAAACCCAAGAAAACAGGCAGTGGTTCTGCGGGAGGAGCGGGCACTGGATCCGGAACAAGCTCCACTTTGGATTCTATCAAGGAGTGCAAGGAGGAGCATGATCTCAAACCCTCGCTCAGCTTGGAGCGCCATAGCCTCGGAAAGCTGCACACGGATATGaaaagcagcaccagcagtAGTAGCACCTTGATGGGGCATCACAacgcgcagcagcagcagcaacagcagcaacaacagcaacagcagcagcagcaatcggCACATCAGCAATGCTTTCCCCTTTACGGACAGGCGgcgacgcagcagcagcaccagcaacatgGCCACAGCATGACTGCATCCTCTGGACAGGCACAGTTGAGTGCTCGCCAGCTTCACGGAGCGTCAGGAACGCAGCTATACACGCCCGGCAGCAGTTCCGGCGGAGGCAGTGCGTCTGCCTACACATCGCACAGTGCGGAGACGCCGGCGCTCAGCAACGGAACACCCTCTCCCCAtttccagcaccaccaccacctggGCGGATCGCATGGACACCACGTGACGGCAGCGGCGGCACATCACCATTTCCatgccgctgccgctgtcgcCGCTTACGGGGTGAAGACAGAGGCGAGTGCCACCAACTACGACTATGTGAACAACTGCTACTTTGGTGGCACCTTTGGAGCGCTCGGAGGAGCTGCATCCACAACGGCCATGGCAGGCGGAGCGGCCAGTGAACTAGCAGGCTACCATCACCAGCACAACGTCATACAGGCAGCCAAGCTAATGGCCACCTCGTAA
- Protein Sequence
- MYHSSAVAAYTDLAAAGSAASAGVGVGVSGYHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTEGFGSAHAQFYSPNAAVMMGSWRSAYDPSGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRMGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGSAGGAGTGSGTSSTLDSIKECKEEHDLKPSLSLERHSLGKLHTDMKSSTSSSSTLMGHHNAQQQQQQQQQQQQQQQQSAHQQCFPLYGQAATQQQHQQHGHSMTASSGQAQLSARQLHGASGTQLYTPGSSSGGGSASAYTSHSAETPALSNGTPSPHFQHHHHLGGSHGHHVTAAAAHHHFHAAAAVAAYGVKTEASATNYDYVNNCYFGGTFGALGGAASTTAMAGGAASELAGYHHQHNVIQAAKLMATS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00597017;
- 90% Identity
- iTF_00619502;
- 80% Identity
- -