Basic Information

Gene Symbol
Camta1
Assembly
GCA_016746365.1
Location
NC:18137075-18171963[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 5.9e+03 -2.6 0.0 12 40 260 287 252 291 0.76
2 3 4.6e-48 1.4e-44 150.9 1.7 2 116 425 537 424 537 0.98
3 3 4.9 1.5e+04 -3.9 0.6 53 53 756 756 707 780 0.54

Sequence Information

Coding Sequence
ATGGAAAATGTGCCCGATATTTCCACCAGCGCTTCGTCctcttctacttctacttctaaTTCAACTTCCACACTGAAACTCCAAAGCCAAATCAACTCTAAAAATGTCCTGATCCGATCGCAGAGCAGTGGCAAGCTAAGCAGCAATGAAGCTAAATCagcaaagcaaacagcaacaaccagtACAACGACGACTCTGCGAGCGGCCAAGCTCAAGATCGGGGCCATgcaacagcagaagcagcagcatcagcagcagcatcagcaaaacctgcagcagcatcaggcTACGAGCGGCGGCAACATCATCCTGCTGCGCGGCACTCGCAACGAAAATGGCCAGATCATCATCCAAAACAAGCAGGACATACTCAGCCTGCTCAgcgagcaacagcagcagcaggagaagaGCCACTCCTCCGCGGCCATCACGCTCAACCAACTGCCCACGGCCACAACGGTGGCTAGGAAGACCATTGTACAGGGCTCGAGTggagccagcagcaacagctccACCATTTCCATTgtggccaacagcagcaacaaggaggccagcagcaacacgaTCCTCTTGCAAACCCCCATCAATGCCAGTCAGTTGGAGAGTGTTCTAAAGGCCCAGGAGCGTTCCAAGCAGGCCAACGCCACGCAAACCAAGATGGTGGAGAGGCCCTTTATGCTGAAGCATGCCACGCGCAGCTTGAGTTCCGAGAGCAACTGCGACAGCAAGTCCCCCTTTGTGCTGCAAACACTGAAGCGTCTGGAGAAGTCTCAATCCATACTGGTCATACGCAACTCCACAGCGTCGTCCTCTGCAACCAACACTTCCATGGCCACTTCGCCACAAAATGGCAGCAGTCTTGCCAACTCAAGTATTCTAAGCGTGACGCGCACCACGAAGGCGGCCAAGGGCGTGGCAGGAGCGCTCCACAAGCtcaaggcagcagcagccacaacagccACGAGCGGAGGAGCCGCTTcagccgcagcaacatcatcGACGGGCACCACCATTCTTAGGCTGGGAAAAAGCGCCACCACAGTGGCCATTAATGGAGGCAGCAAGCTAGAGGCAACGACGAGCACAACCACAGCGGTGTCAGCACcggcgacaacgacaacatcaaATAAATTGTCCAACGCGGTGACAaccgagcagcagcagcaacaatcgACAACAACGCAAACGAATGTGCCACTTGGGAACGATGGCGAACCCATCAAGCTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCACAGCGTCATCGTTGGAATACAAATGAGGAAATCGCTGCGATTCTTATCAGCTTTGATAAACATGGCGAGTGGCAGTCCAAAGAGGTTCGAACCAGACCCAAGAGCGGATCGCTCTTGCTCTACTCAAGGAAGAAGGTGCGTTACCGACGCGATGGATACTGCTGGAAGAAACGCAAGGACGGCAAGACGACGCGCGAGGATCACATGAAACTAAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTGTTGCAGAATCCGGACATTGTTTTGGTGCACTACCTGAACGTCCCATATCCGGATGATAATAAAATGGCCGTGATTGCACCCAGTATCACACTTTGGGGCGATAAAAAGGAGTGGACCAAGGAGGAGCTGGTCAGTCAGCTCAAGCCCATGCTATCCACAATCAATTCCGACGACGACTCCGACTCGGGAAACGATATAGAAATATCAACGGCGGAGACGGTGGAGTCCATAGTGTGCCAACTGATGGAGAAGCAGAGGTTGTCGCGCCAGGCTGCCTTGGTCAAGCAGCTGGACTGCGGGTGCGGGGATGGAGGCTGTGTGGACGGAAAGAACTGTACGCATCCCGTGATGCGACGATCGGCAGCCATGCTGAAGTCCTCGGTGCAGGAGAAACGGCTAGGCGAGCCTTTCAACAGCAACGCGCCCAATGTGGTGGTGGCCAGCAAGCTCTACTCCCGATGGGCGGAGCGGCCCAGGCAGCACGTGGACAATCACGGCCAGTTCCACAACGTCACACAGCAGTTGCCGCAGGAATCGGCCATTAAGTTTCAGATCATTccgccgcagcaacagcagcagcaggatggGAACtacctgcagcagcagcagtatcGCGGAGCAAGTCAAATGCTCGCCGCAAGGAGTAATCTGGTgatgcagcaacagcaacagcaacagcagcaacaccagcagcagcagcaataccaccagcaacaacagcagcagcaccaacaacagcagcaacagcagcagcacttgaGTCTACAGCGATTTGTTGCCAGTCAAGGCCAGAATTCGGTGCATCTCAATCAGCAGCACAGGCTGCAAATAGCCAATACAACGATCACAGCGACACCCAGAGATCCTGCGACGACTCCAGCAGCGGCAGCttcaggagcagcagcagccgcctcGAATATTATGGACACCGAGCTAattgaaaaccaaaaccacaTGACCACAAACAAAATCACAAACTCcggcagcagcaatagcagtGGCAGCAATGCCAGCAAGCAATTAGCAGCCCAAACAAACAACGAATTAAATGTCGTAAATAATAACGACCCCGGCAACAATAACTTTATGTAcaatcaacagcagcaacttaATGCttccagcaacagcaacaacagcagccagcagcagcagcagcaacattatTATAAATTGCAACAGACAACAGCAACCCCAACTAGTGGTCAGCCGCCTCCTCTGGCGCAAGTTCAACCCCACTCCTTGGCCCAACCTCCCGTGGAAGCCATGTGCATGTCACCCGAgcatcgcagcagcagccaggcCACACCTGCAACGTCTTCCGCTGGTAGCATCCCCTCctccatatccatatccgtgtccgcatccacatccacatccacacccactCCCACGACCATATCCACGCCCACATCGGGCACTTCGTCCACTTCGAGTTCCTTACAATCGATTATCGATGgcaatcagcagcaacaaattaCAACGACGTCGACGGCAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCTCTGAGCAGCAAGACAACCACACAGTCAACAATCAGGCCACAGAAGCCCCCAACAGGAGTCAGctgcaatcgcaatcgcaatcgcagtcgcagtcgctaTCTCAATCCCTGAACCAAAATGGTTGTGCAACTTACAGTGCTTCCAGTGATAACAGCAGCCAAATTAGTGACGAAAGCAGCAGCTTCGGCGGTAACAAtcaaaacagcagcaacagcagcagcagcgaggaGGAACCCCAGGTGGAAACGTTGAGCTTTTTCAACGAGACCTTGGATCTGTCCCACGAGGATATTCAGCGCACTCTGATAGCGAATATGCCGTACAATACGACAGCAGCGGGAGCCACAGCACCCAGTACAACGATAACAACGGGAAACAAAGCAGGCAAACTCGAGTTAAATCAACAGGAGGCGGAGAAGAAACCCTCGATGAGAACAGAACCCGCAGCCGAGGTTGAGGACGATGAGACCGACGATGTGTTTGCCAATCTGGATGCCTTCGATATGCTCGTGGAGTTTCCCGAACTCGATTTGGATGACAAGCAGGCCCTGAATAACACGGCGTTGGAGCAGGGCTCCTTTTTGGGAGAGACTGCACCATCGCAGCCACGCAAGGTACACAATATATGCGACTTTAGTCCCGAATGGTCGTACACGGAGGGAGGCGTTAAGGTTTTGGTGGCCGGACCTTGGACGAGCTCGAATGGCGGAGCCTATACGGTGCTATTTGATGCGCAGCCCGTACCCACGCAACTGGTCCAGGAAGGAGTACTCCGCTGCTATTGTCCAGCCCACGAGGCCGGATTTGTGACTCTGCAGGTGGCTTGTGGTGGATTCCTTGTTTCCAACTCCGTGATGTTCGAGTACAAGCTTTCCCTGCTGGCGGATGCTCCATTCGATGCCACCAGCTCCAACGATTGCCTGTACAAGTTTACGCTGCTTAACCGCCTGTCTACCATTGACGAGAAACTGCAGGTGAAGACGGAGCTTGAGCTCACGACCGACAACACTGCTCTCTGCTTGGAGCCAAACTTCGAAGAGAAGCTGGTGGCATATTGCCACAAACTGATCAAGCACGCCTGGAGCATGCCCAGCACAGCTGCCTCCTGGACGGTGGGCTTACGTGGCATGACTCTGCTCCACTTGGCCGCTGCCTTGGGCTATGCCAAGCTCGTGGGCGCCATGCTCAATTGGCGTTCGGAAAACCCACATATCATTCTCGAAACCGAACTAGACGCCCTCAGCCAGGATGTCTACGGTTTTACTCCGCTCGCCTGGGCCTGTGTGCGTGGCCATGTAGAGTGCTCGCTGTTACTCTACAAATGGAACCACAATGCGCTGAAGATCAAAACACAGGCACAGCAAACTCCTCTGGATTTGGCCAGCATGCGGGGCCACAAAACCTTACTGGCGCAGATGTATCGCTTGGAGAAGGAGCGCTGCCGCAAGCCGCAACTGCGCGGAGGCTTGGCCAATCTTTCTATGAACATGGGCGTGGAAGCGGAGGCGGACGAACAGCACCAGAGTTTCAGCGCTTTTGATTTGGAACTCCAGCGGAAGCATGATGGCGTTTTTCTGAGACCTGTTGCAGTGCATAGCAATCAGAGTCCACCCAATAGTAGCAGTCGTTACTCCAAACGTTCCTCTATAGATAGTGGCATTAACATGGACATACGGAGCAAGTCTGGAAAAGCGCTCGCCAGGCTCCATAGCAACTTTGAGAGCCATGACAGCTATGCTCTGGGCGTTGACTCGCCGTTGGACTCACTGACTGGAACCAACTGTCTGCTATCGCCGCTGCGCAAAATGGACTTTGCCCTTTGCGAGGTATCTACGGGCGAATCGAGTCCCGTGCACGACAAAGATTGCGACGACAATTCAACGAGCGCGACCGACGTGACCATTGGCAATGATTTGGCCCTGCCCGATGCCGTTGTAGGGGACTCCGATGCCAAAGTTCTAACTTTAGCTGAACACATTATAGCAGCTATGCCAGAACGGATCAAGAACGAAGCCGATGAAATGATGGTGCTGGGCAGTCCCTTAACAGAACCCCTAACTTCAGAATCTTCTGCGCTGACGGACAGCTTTATGGATCCCCTGCTCGATTCGCTGCCCAACACACATTTCGACAGCGACTTCAGCTTCGATTTCCATGACCATAGCTATCGCTATCACGACGTCAGCACGCCCTGCTCCAGTTTGAGTCCGGCCAGCTCGGGACCGCTGCAGTCCCCGGCCAGTTACTCTATTTTGGGAACCGATCCCTCAGTCAGTTCGCCCAGTCCCCCGCCATCCACCAAACAGCTGACGGAGTTTCTGCACGCCTCCAGTATCTCGTCGTATCCTTTTGAAACGGATTTCTCCAAGCTAACCCTAACAGACACGGAGCAGCGAGAGCTCTACGAGGCAGCCAAGTGCATTCAGAAGGCGTATCGCTCGTACAAGGGTCGACAGAAGCTCGAGGAGCAGAACAAGGAACGGAGCGCTGCCACAGTAATCCAGAACTACTACAGGCGGTACAAGCAGTACGCCTACTACAGGCAGATGACAAACGCCGCCCTGGTGATTCAACATGGCTACCGCTCCTACAGACGCAACAAGCGATTCAAGAAGAGCGGCTTGTGCTTGAGCAGCTCCAGTGATCATGGAAGTGTGAGCAGCAACTCCCAGTGCCTGTCCAGCTTTTACGATCACTACAAACAggatcagcagcagcttcaCGAGATGGGCTCCCAGCCCAGCACGCCTAAGGAAACCAGCCCCTCGGGTCCCTTGAAGCGAACCTACTCGCAGTCTACTCAAAATCAAGCTGCCAGGAAAATTCAACAGTTTATGAGACAATCACGCATCAAACTACAGAAAGAGCGAGCCGAAAAAGAGAAGCTTGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTTGGTGTGCCACGAAAATAGCATTTCTGCGCCAAGCAGTGGCAACACCAATgcgagcaacagcaacaatctACACCAAATACAATCCAATCAGTGA
Protein Sequence
MENVPDISTSASSSSTSTSNSTSTLKLQSQINSKNVLIRSQSSGKLSSNEAKSAKQTATTSTTTTLRAAKLKIGAMQQQKQQHQQQHQQNLQQHQATSGGNIILLRGTRNENGQIIIQNKQDILSLLSEQQQQQEKSHSSAAITLNQLPTATTVARKTIVQGSSGASSNSSTISIVANSSNKEASSNTILLQTPINASQLESVLKAQERSKQANATQTKMVERPFMLKHATRSLSSESNCDSKSPFVLQTLKRLEKSQSILVIRNSTASSSATNTSMATSPQNGSSLANSSILSVTRTTKAAKGVAGALHKLKAAAATTATSGGAASAAATSSTGTTILRLGKSATTVAINGGSKLEATTSTTTAVSAPATTTTSNKLSNAVTTEQQQQQSTTTQTNVPLGNDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTINSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDGGCVDGKNCTHPVMRRSAAMLKSSVQEKRLGEPFNSNAPNVVVASKLYSRWAERPRQHVDNHGQFHNVTQQLPQESAIKFQIIPPQQQQQQDGNYLQQQQYRGASQMLAARSNLVMQQQQQQQQQHQQQQQYHQQQQQQHQQQQQQQQHLSLQRFVASQGQNSVHLNQQHRLQIANTTITATPRDPATTPAAAASGAAAAASNIMDTELIENQNHMTTNKITNSGSSNSSGSNASKQLAAQTNNELNVVNNNDPGNNNFMYNQQQQLNASSNSNNSSQQQQQQHYYKLQQTTATPTSGQPPPLAQVQPHSLAQPPVEAMCMSPEHRSSSQATPATSSAGSIPSSISISVSASTSTSTPTPTTISTPTSGTSSTSSSLQSIIDGNQQQQITTTSTAATCDNLMSANALSEQQDNHTVNNQATEAPNRSQLQSQSQSQSQSLSQSLNQNGCATYSASSDNSSQISDESSSFGGNNQNSSNSSSSEEEPQVETLSFFNETLDLSHEDIQRTLIANMPYNTTAAGATAPSTTITTGNKAGKLELNQQEAEKKPSMRTEPAAEVEDDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSFLGETAPSQPRKVHNICDFSPEWSYTEGGVKVLVAGPWTSSNGGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDATSSNDCLYKFTLLNRLSTIDEKLQVKTELELTTDNTALCLEPNFEEKLVAYCHKLIKHAWSMPSTAASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRSENPHIILETELDALSQDVYGFTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLASMRGHKTLLAQMYRLEKERCRKPQLRGGLANLSMNMGVEAEADEQHQSFSAFDLELQRKHDGVFLRPVAVHSNQSPPNSSSRYSKRSSIDSGINMDIRSKSGKALARLHSNFESHDSYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVSTGESSPVHDKDCDDNSTSATDVTIGNDLALPDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISSYPFETDFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLCLSSSSDHGSVSSNSQCLSSFYDHYKQDQQQLHEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQKERAEKEKLVHQRRAEYLQNLQFQGQQEMLVCHENSISAPSSGNTNASNSNNLHQIQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00505392;
90% Identity
iTF_00591686;
80% Identity
-