Basic Information

Gene Symbol
Camta1
Assembly
GCA_018153835.1
Location
NW:5656862-5690719[+]

Transcription Factor Domain

TF Family
CG-1
Domain
CG-1 domain
PFAM
PF03859
TF Group
Unclassified Structure
Description
CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.035 5e+02 0.1 0.1 20 44 76 100 67 133 0.79
2 4 0.74 1e+04 -4.2 0.0 14 39 261 286 254 288 0.76
3 4 5.7e-49 8e-45 151.0 1.7 2 116 430 542 429 542 0.98
4 4 0.67 9.4e+03 -4.0 0.5 45 70 740 765 723 777 0.50

Sequence Information

Coding Sequence
ATGGAAAATGTGCCCGATATTTCCTCCAGCGcttcgtcttcttcttcttcgaaTTCTACTTCCACTCTGAAACTCCAAAGCCAAATCAATTCCAAAAATGTCCTGATTCGATCGCAAAGCAGCGGCAAGTTATTCAGCAATGAAGCTAAACcggcaaaggcaacagcagcaaccagTACAACGACGACTCTGCGAGCGGCCAAGCTCAAGATCGGGGCCATgcaacagcagaagcagcaactccagcagcagcagcagcaacatcagcccACGAACGGCAGCAACATTATCCTGCTGCGTGGCACTCGCAACGAGAATGGCCAGATCATTATCCAGAACAAACAGGACATACTCAGCCTGCTCAgcgaacagcagcagcagcagcaggagaagaGCCACTCCGCCACGGCCATCACGCTCAATCAACTGCCCACAGCAACAACGGTGGCTAGGAAGACCATTGTGCAGAGCTCGGGTGGaaccaccaacagcagcagcagcagtggtaACTCCACCATTTCTATTGTGGCAAGTGGTAACAACAAGGAGGCCAGTAGTAACACGATCCTTCTACAAACCCCCATCAATGCCAGTCAGTTGGAGAGCGTTTTAAAGGCTCAGGAGCGTTCCAAGCAGGCGAATGTCACACAAGCCAAGATGGTGGAGCGGCCCTTTATGCTTAAACACGCCTCTCGCAGTCTCAGTACTGAGAGCAACTGTGACAGCAAATCCCCATTTGTCCTACAAACGCTGAAGCGTTTGGAGAAGTCGCAATCCATACTGGTGATACGCAACTCCACAGCTTCGTCCTCTGCAACCAACACTTCCATGGCCACTTCGCCACCGAATGGCAATAGTCTGGCCACCTCAAGTATTCTAAGTGTGACACGCACTACAAAGGCGGCCAAGGGTGTGGCAGGAGCGCTGCACAAGCTCAAGgtggcggcagcaacaacagctaaCAGCGGTGGAGCAACATCAGCGGGTGCAACACCATCCACGGCCACTACTATACTTAGGCTAGGAAAAAGCGCCACCACAGTGGCCATTAATGGAGGCAGCAAGTTAGAGGCAacgacaaccacaacaacaacaatagcagccgcagcaacaacgacaacatcAAATAAATTGTCCAACGCGGTGACAAccgagcagcagcaacagcaacagcagcagcaacaatcgACAACAACGCAAACGAATGTGCCTCTTGGGAACGATGGCGAACCCATCAAGTTGCCCGACAATTTGGAGAGCCTGCCAAGAGCCGACAGTTTTCCATCACAGCGTCATCGTTGGAATACAAATGAGGAAATCGCTGCTATTCTTATCAGCTTTGATAAGCATGGCGAGTGGCAGTCCAAAGAGGTTCGAACCAGACCCAAGAGCGGATCACTGTTGCTGTACTCAAGGAAGAAGGTCCGTTACAGACGCGATGGATACTGCTGGAAGAAACGCAAGGATGGCAAGACAACCCGTGAGGATCACATGAAACTTAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACACTCGGCCATATTGCCCACATTTCATCGCAGATGTTACTGGCTATTGCAGAATCCTGACATTGTTTTGGTGCACTACCTGAATGTCCCGTATCCGGATGATAATAAAATGGCCGTGATTGCGCCAAGTATCACACTTTGGGGCGATAAAAAGGAATGGACCAAGGAGGAGCTGGTCAGCCAGCTCAAGCCCATGCTCTCCACAGTTAATTCAGACGACGACTCTGATTCCGGCAACGACATAGAAATATCGACGGCGGAGACAGTGGAGTCCATAGTTTGTCAGCTTATGGAGAAGCAGAGATTATCCCGTCAAGCTGCGCTGGTCAAGCAGCTGGACTGCGGCTGCGGGGATGGAGGATGTGCGGACGGAAAAACATGCACGCATCCCGTGATGCGGCGATCGGCTGCCATGCTGAAATCCTCAGTGCAGGAGAAAAGGCTGGGGGAGAACTTCAATGGCAATTCGCCCAATGTGGTGGTAGCCAGCAAGCTCTACTCTCGATGGGCAGAGCGGCCAAGACAGCACCTGGACAATCATGGGCAGTTTCATAATGTAACGCAGCAATTGCCACAGGAGTCGGCCATTAAGTTTCAGATCATtccgccgcagcagcagcaggatgGGAActaccaacagcagcagtatcGGGGAGCCAGTCAAATGCTGGCCGCCAggatgcaacagcagcagcagcagcagcagcaacaccaacagcagcagcagcaataccaccagcaacaacagcaacagcatttGAGCCTGCAACGTTTCGTTGCGAGTCAAAGCCAGAATTCGGTGCATCTCAATCAGCAGCATAGACTGCAAATAGCCAATACAACGATCACAGCCACAGCCAGAGATCCTGCGACGACttcagcagcagtagcagcagcagcagcggcagtcGCCTCAAATGTTATGGACACTGAActaattgaaaatcaaaaccaCATGACCGCAAACAAAATCACAAACtccaccagcaacagcagcagcaatagcagtAGCAGCAATGCCAGCAAGCAATTAGCAGCTCAAACAAACAACGAATTAAATGTCGTAAATAATAACGACCCCGGCAACAATAACTTTATGTAcaatcaacagcagcaacttaATGCttccagcaacagcaacaacagcagccagcagcagcagcaacattattataaattgCAACAGACAACAGTAACAACCCCAACTAGTGGTCAGCCGCCTCCTCTGGTGCAAGTTCAACCCCTTTCCTTGCCCCAACCCCCCGTGGAGGCCATGTGCATGTCACCCGAGcatcgcagcagcagcagcagccagcaTCCCACACCTGCAACGTCTTCCGCTGGCAACAATCTCCCTTCCTCATCCACACCCACATCCATATCCACACCCACATCGGGCACTTCGTCCACTTCGAGTTCCTTACAATCGATTATCGATGGcaatcagcagcaacaaattaCAACGACATCGACGGCAGCAACTTGTGATAATTTAATGAGCGCCAATGCGCTCTCTGAGCAGGACAGCAACACAGTCAACAATCAGGCCACAGAAGCCCACAATAGGAGTCAGCCGCAGTCGCAGACGCTGGCTCAACCCTTGAACCAAAATGGTTGTGCAACTTTCAGTGCTTCCAGTGATAACAGCAGCCAAATTAGTGACGAGAGCAGCAGCTTTGGCGGTAACAAtcaaaacagcagcaacagcagtagcagcagcgaGGAGGAGCCCCAGGCGGAGACGTTGAGCTTCTTTAACGAGACATTGGATCTGTCTCACGAGGATATTCAGCGTACTTTGATTGCCAATATGCCGTACAATACTACGGTAACAGGAGCAACAGGAACCGTCAATACAAcgacagcaacaggcaactgcAAACTGGAGAACAATCAACAGGAGGCGGAGAAGAAACCCTCGCTGGGAACTGACCCTGAAACGGAGGTTGAAGAGGACGAAACGGATGATGTGTTTGCCAATCTGGATGCCTTCGATATGCTCGTGGAGTTTCCAGAATTGGATTTAGATGACAAACAGGCCCTGAATAACACCGCTTTGGAGCAGGGCTCCTTTTTGGGAGAAGCAACGCCAACGCAGCCTCGCAAGGTCCTTAATATATGCGACTTTAGTCCCGAGTGGTCTTACACGGAGGGAGGCGTTAAGGTTCTGGTGGCCGGACCCTGGACCAGTGCGAATGGTGGTGCCTACACTGTGCTCTTTGATGCCCAACCCGTGCCCACGCAACTTGTGCAGGAGGGCGTACTCCGCTGCTATTGTCCCGCTCATGAGGCGGGCTTTGTTACTCTGCAGGTGGCCTGCGGCGGATTTCTAGTCTCCAACTCAGTGATGTTCGAGTATAAGCTCTCACTGCTGGCGGATGCTCCTTTCGATGCCAGCAGCTCCAATGATTGCCTGTACAAGTTCACGCTGCTCAATCGCCTGTCCACCATCGATGAGAAGTTGCAGGTGAAGACAGAGCAGGAGCTCACGACCGATCACACCGCTCTCTATCTGGAGCCCAACTTTGAGGAGAAACTGGTGGCGTATTGCCACAAGCTGATTAAGCACGCCTGGAGCATGCCTAGCACAGCTGCCTCTTGGACAGTTGGATTGCGTGGCATGACCCTGCTTCATTTGGCAGCTGCTTTGGGCTATGCCAAGCTAGTGGGGGCAATGCTTAATTGGCGGTCAGAGAATCCACATATCATACTCGAAACCGAACTGGACGCCCTTAGCCAGGATGTCTATGGTTTTACGCCGCTCGCCTGGGCCTGTGTGCGTGGTCATGTGGAGTGCTCCCTGTTACTTTACAAGTGGAACCACAACGCCCTGAAGATTAAGACCCAGGCCCAACAGACTCCCTTGGATTTGGCCAACATGCGTGGCCACAAACATTTGCTGGCACAGATGTATCGGCTGGAAAAGGAGCGCTGCCGGAAGCCACAATTACGCGGAGGTTTGGCCAATCTTTCGATGAACATGGGCGTGGACGCTGAGACGGATGAACACCAGAGTTTCAGTAGTTTCGATTTGGAGCTCCAGCGCAAGCATGATGGAGTTTTCCTGAGACCAGTTGCTGTGCATAGCAATCAGAGTCCGCCCAATAACAGCAGTCGTTATTCCAAGCGATCCTCCATAGACAGTGGTATTAACATGGATATACGGACCAAATCAGGAAAACCTCTGGCCAGGCTTCATAGCAACTTTGAGAGCCATGACAATTATGCTCTGGGCGTAGACTCGCCGCTGGACTCCTTGACTGGGACCAACTGTCTGCTGTCGCCGCTGCGTAAAATGGACTTTGCTCTCTGCGAGGTATCGACGGGCGAATCAAGTCCCGTGCACGAGAAAGATTGCGACGACAACTCAACGAGCGCGACCGACGTGACCATTGGCAATGACATGGCCCTGCCCGATGCCGTTGTAGGGGATTCTGATGCCAAAGTACTGACATTAGCGGAGCACATAATAGCAGCCATGCCAGAAAGGATCAAGAACGAAGCCGATGAAATGATGGTACTGGGTAGCCCTTTGACGGAACCCCTCACCTCAGAATCTTCAGCGCTAACGGATAGCTTTATGGATCCCCTGCTGGATTCACTACCCAACACTCACTTTGATAGCGACTTTAGCTTTGACTTCCATGATCATAGCTATCGCTATCATGATGTCAGCACGCCCTGCTCCAGCTTGAGTCCAGCCAGTTCTGGGCCACTGCAGTCACCAGCCAGTTACTCGATATTGGGAACTGATCCCTCTGTCAGTTCACCCAGTCCCCCGCCATCCACCAAACAGTTGACGGAGTTTCTACACGCCTCCAGCATCTCACAGTATCCGTTTGAGGCGGATTTCTCCAAGCTTACCCTTACGGATACAGAGCAACGAGAACTTTACGAGGCAGCCAAGTGCATTCAGAAGGCATATCGCTCGTACAAGGGCCGACAGAAGCTCGAAGAGCAGAATAAGGAAAGGAGTGCCGCCACTGTGATCCAGAACTATTACAGGCGGTACAAGCAGTACGCTTATTACAGGCAAATGACAAATGCCGCTTTGGTTATTCAGCATGGCTATCGCTCCTATCGACGGAACAAACGATTCAAGAAGAGCGGTTTGGGTTTAGGCAGCTCCAGTGATCATGGCAGTGTGAGCAGCAACTCGCAGTGCCTGTCCAGCTTTTACGATCACTACAAACAGgatcagcagcagctgcacgAGATGGGTTCACAGCCCAGCACGCCCAAGGAAACTAGCCCTTCGGGTCCTTTGAAGCGAACATACTCACAGTCCACCCAAAATCAAGCTGCCAGGAAAATCCAACAGTTTATGAGACAATCACGCATCAAacTACAGAAAGAGCGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTTTCAAGGGCAGCAGGAAATGTTGGTGTGCCACGAAAATAAcaTTTCTGTGCCGAGCAGTGGGAACACCAATgcgagcaacaacaacaatctacACGAAATACAATCCAATCAGTGA
Protein Sequence
MENVPDISSSASSSSSSNSTSTLKLQSQINSKNVLIRSQSSGKLFSNEAKPAKATAATSTTTTLRAAKLKIGAMQQQKQQLQQQQQQHQPTNGSNIILLRGTRNENGQIIIQNKQDILSLLSEQQQQQQEKSHSATAITLNQLPTATTVARKTIVQSSGGTTNSSSSSGNSTISIVASGNNKEASSNTILLQTPINASQLESVLKAQERSKQANVTQAKMVERPFMLKHASRSLSTESNCDSKSPFVLQTLKRLEKSQSILVIRNSTASSSATNTSMATSPPNGNSLATSSILSVTRTTKAAKGVAGALHKLKVAAATTANSGGATSAGATPSTATTILRLGKSATTVAINGGSKLEATTTTTTTIAAAATTTTSNKLSNAVTTEQQQQQQQQQQSTTTQTNVPLGNDGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHGEWQSKEVRTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDGGCADGKTCTHPVMRRSAAMLKSSVQEKRLGENFNGNSPNVVVASKLYSRWAERPRQHLDNHGQFHNVTQQLPQESAIKFQIIPPQQQQDGNYQQQQYRGASQMLAARMQQQQQQQQQHQQQQQQYHQQQQQQHLSLQRFVASQSQNSVHLNQQHRLQIANTTITATARDPATTSAAVAAAAAAVASNVMDTELIENQNHMTANKITNSTSNSSSNSSSSNASKQLAAQTNNELNVVNNNDPGNNNFMYNQQQQLNASSNSNNSSQQQQQHYYKLQQTTVTTPTSGQPPPLVQVQPLSLPQPPVEAMCMSPEHRSSSSSQHPTPATSSAGNNLPSSSTPTSISTPTSGTSSTSSSLQSIIDGNQQQQITTTSTAATCDNLMSANALSEQDSNTVNNQATEAHNRSQPQSQTLAQPLNQNGCATFSASSDNSSQISDESSSFGGNNQNSSNSSSSSEEEPQAETLSFFNETLDLSHEDIQRTLIANMPYNTTVTGATGTVNTTTATGNCKLENNQQEAEKKPSLGTDPETEVEEDETDDVFANLDAFDMLVEFPELDLDDKQALNNTALEQGSFLGEATPTQPRKVLNICDFSPEWSYTEGGVKVLVAGPWTSANGGAYTVLFDAQPVPTQLVQEGVLRCYCPAHEAGFVTLQVACGGFLVSNSVMFEYKLSLLADAPFDASSSNDCLYKFTLLNRLSTIDEKLQVKTEQELTTDHTALYLEPNFEEKLVAYCHKLIKHAWSMPSTAASWTVGLRGMTLLHLAAALGYAKLVGAMLNWRSENPHIILETELDALSQDVYGFTPLAWACVRGHVECSLLLYKWNHNALKIKTQAQQTPLDLANMRGHKHLLAQMYRLEKERCRKPQLRGGLANLSMNMGVDAETDEHQSFSSFDLELQRKHDGVFLRPVAVHSNQSPPNNSSRYSKRSSIDSGINMDIRTKSGKPLARLHSNFESHDNYALGVDSPLDSLTGTNCLLSPLRKMDFALCEVSTGESSPVHEKDCDDNSTSATDVTIGNDMALPDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFHDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSISQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERSAATVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSGLGLGSSSDHGSVSSNSQCLSSFYDHYKQDQQQLHEMGSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQKERAEKEKLVHQRRAEYLQNLQFQGQQEMLVCHENNISVPSSGNTNASNNNNLHEIQSNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2