Basic Information

Gene Symbol
-
Assembly
GCA_016746365.1
Location
NC:11681547-11686161[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00051 0.58 10.7 0.1 21 45 788 810 777 811 0.85
2 2 0.00022 0.25 11.9 0.1 23 44 1065 1088 1056 1090 0.87

Sequence Information

Coding Sequence
ATGAGTAGCAGTACTCCGGGGAGCGAAAGTGCCCTGACGAAGGTAGCGACTCCTTCGCCATCGCCACTGGCGAAAATGGAAGCGGATTTTACGAGCTCCAAGTTCGAGATGCACCCCTCGCTTTCGGACGAGGAACGCCGCTTCTATCTGAAGATGTACCCCAATGTGGATCTGGTGAACCAGCGAAGAGTGCACTGCACCGTGTGCAAACTGCACCTGGGCACAGCTCCCGCCGCCGAGAGCAACATCAAAATGCATCCCATACTGCGGGTGACGCACTGCGTCAAATGTCACGATTTTTACAACAGCGGCGAGTTCTCCAAGGGCGAGGATGGCTCTGAGCTGTACTGCCGCTGGTGCGGACAGGGTGGCGAGGTATACTGCTGCTCCACCTGTCCGTACGTCTTCTGCAAGTCATGCATTGTGAAGAATCTTTCCAAGGGCGTCATCGTGGACATAGAACAAAACGAGCACTGGAACTGCTTCAGCTGCACCTCCAAGATCCTCTGGCCACTGCGCGCCCAGCACTGGGCGCTGGTCAACTATCTTCAGACGCAGAAAAGAGCCCTGCAGACCCTACAGCTGCCCGAGGTGGAGGCCCGACGCCAAATGCTGAAGGATAGCAGCAACTGCTGCCGCTTGGCCAAGTCGAAAACCAGTAGTTTATCCGACTCCATGGAGAGCTTGGAGTCCAATGTATCCAGGCGCAGCCAGGGCAGCTCAGCGGGCTCGAGTAAACGAGGATCCTTGCCGAAAAGCATTCCTCAGGGACCGCCAACTAAACGTTCGAAAGCTTCCAACGACGAGGTGGTCTGCACACCGGATTTGCTTAGCATGTTGGAGCCGGATTGCCAGCTCTCTGTGACCCCCAAGCCTACAGGCCGTCAGCCGGTGCCAGCGGCGAATATAACAACCACTCCAAGGATTGTCACTGTCCAGCAAAACTACCAACCGGGACCAAGTTCcagtaacagcagcagcaacggaAGCGCAACTGGTTCCTCATCGGTGCCACCGCCACGTAGTAGTCTGCCACCACCTCTGGTGCTCAGTGGATCTGGAATCCGCTACCGCCAAAATGCTCCTGGTGGGGTCTCGGGTGTAGTGCGTCGCACTGTAGTCCCCAACTCGGTGAAGACCACTGGGCCAGTCTTTCACACAATCAATGGATTCAAAGTGGATTTGAATAGCGCTGCACAACAGGATTCCTACCGCCTGCCCAATGGTCGACTAATTCAAGTTAAACGTCAGCTACCCCAAGCCAGTCAGCCggcaccaacaccaacaccaccaacaccaccagcaccgCCTGCCTTGGTCGTTCCTCAAGTGGGACCGGGTGTGGTTATCCGACCCCGGGCTCCGGTTACGTCTAATAGGCCATCACTGCATATCAGCACATACGGCTCTAACATGGGCATCTATAACCCGCAGACgaaccagcagcagcgggcTCCGCATGTACGAGTTGGAAACGCCAATCCAGCGCCTCCTCCGCTACAAGGTCCTCCGCCCAATGTCAATGGCGGTCAAACTCTTATGATTACTCCAGCGCCTCCACCACCGCCTAAAGGTCCAACTTTGGTTCGTCACACTTTCCCCAACACGCCGATGGGACAGGCACGGACGCAGCTGCAGGAACAAATCTTTAGCGCCATGGACATCTGCACTCACCTTACCGGCAAAGTGGTATCCCTTACCCACTCGAACGCCTACAACCAGGTGCGCAGTTATCTGGAACTGAAGGAGCTGTACATCCACATGTCCTATTTGATGACATATGCGATTGGCCGGTTCAAGAACTTGCAGGAGAAGTGCTTGGTGGACATGCGAGAGAAGGGTTTTAAGAACGACGCCAACAGTCTGGAGAATGGTCAATTAGCTGCTGCCGTGGATTACGTGTGCTACGGCCAACTGGACGACGTGGATCTCTTCAACACAGGCTGCAATAGTTTTCACAATCAGGTTTACGAGTACCGCAAAAGCTTGCATGCGAATCTTAAGGATGGCGAAGACTGCGAACCATTGCCTCCGCTGATGCCGCTGGGAGTTCGAGCCGAAGGTGATCCCATCGATGAGCCAGAGGAGCCAGAAACGCTACCTGAACAGCAGCAAGATGACACCGGAAAGGACTCCGAAGAAGCGGCTGATTTTGATTACGATGAGCCAGATGAGTTGGATGATGATTTGGATGACGATGACTTGGACAACGAGGAGTGTGGTGAATTGGGAACCGAGGAGAGCATGAATCGGAATGAACAGGCTCACGCCTACGATCGAAAGCTGACAAGATTACTTCGCGAGTATCCTTCGTTGTGGTGCACCCGTCATCCCGATTACGGCAAGAAAGAGGTCACCAATAAGCAGTGGCGGGTGATTGCCAGTCACTTTCCACGCGGCGATGACATTAAGCTGCGCTGGAAGAACGTAAGAAAACGATACGTTCGGATTGAGCGGCGCTTAAAGCAGGGAAAGCGTTTCAAGGGCTACTTCGATAAGGCCACAAACTATCTGGAGAACAGGGATCGCCCGAGGAGCGAGTGGCTGGCTGTGGACTGTGGCGAAGATGACGGCGACGGCTTCGAGCGCAAGCATCTCGACGTAATAGAGAATAAAATGGAGCAAAAAGCACTTAGGCTACCAGTAGCTAAAATCAACCTGAAAGGTGGATCCAGAGTGCCGATGCGCCCACTAGAAGTGCGTCCTATTGATCAACGCATCATAACTTTCGCTAAAAGCCATCCAGTATTATGGCGCAAATCTGCTGACCCCGAATTCAACAGTATTGACGAGCAAACTCGAAAGTCCCTGTGGCAGAACTTTTGGAAGTCAGCGCCCAaTTATGCTTGCGAGTATCTTGTGGAGCGTTGGCAGCAAATGTACGAGATGTACAAGTCTTTCCGCCTGAAGAGTATTAAAGAAAAGGGAATCTTTGCGAATCTGGAGCTAAAGTACTCAAAGTACTTGGCCAGCTTGTACTTCCTGTACAAGATCGATGAGCAAGACCTCCGCGACGAGTTCGAGCCGCTACAGGACTGTGTCCCGAGCGGAACAGACTTTGCTGGAAACCTAAAAGATATGCCCGATGACAAGCAGTTCTGTCAGCAACTGGTTTTGGCCATGCGGGCATATCCCACACTGTGGAACCCACGGCATGTTGACTACAGCGATGTGGGAGCCAGGGAGCGCTTATGGCCGGAAGTGGCCAGGCGGTTACCTCGGTTCAAGCGGGACGCTCAGGCCTGCAAGCTCCGCTGGCAAATGGCCAAGTTCGCTTACGAGTGCTACCTACGCGAGATGGAGAGTCATCCGCGGGTCAACGAGCGCAAATTGCAAAAGTTGCGGTCCAACTTTCCGCTCGAGGAGATGCGCTTCCTCAACATTTAG
Protein Sequence
MSSSTPGSESALTKVATPSPSPLAKMEADFTSSKFEMHPSLSDEERRFYLKMYPNVDLVNQRRVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEHWNCFSCTSKILWPLRAQHWALVNYLQTQKRALQTLQLPEVEARRQMLKDSSNCCRLAKSKTSSLSDSMESLESNVSRRSQGSSAGSSKRGSLPKSIPQGPPTKRSKASNDEVVCTPDLLSMLEPDCQLSVTPKPTGRQPVPAANITTTPRIVTVQQNYQPGPSSSNSSSNGSATGSSSVPPPRSSLPPPLVLSGSGIRYRQNAPGGVSGVVRRTVVPNSVKTTGPVFHTINGFKVDLNSAAQQDSYRLPNGRLIQVKRQLPQASQPAPTPTPPTPPAPPALVVPQVGPGVVIRPRAPVTSNRPSLHISTYGSNMGIYNPQTNQQQRAPHVRVGNANPAPPPLQGPPPNVNGGQTLMITPAPPPPPKGPTLVRHTFPNTPMGQARTQLQEQIFSAMDICTHLTGKVVSLTHSNAYNQVRSYLELKELYIHMSYLMTYAIGRFKNLQEKCLVDMREKGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKDGEDCEPLPPLMPLGVRAEGDPIDEPEEPETLPEQQQDDTGKDSEEAADFDYDEPDELDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTNKQWRVIASHFPRGDDIKLRWKNVRKRYVRIERRLKQGKRFKGYFDKATNYLENRDRPRSEWLAVDCGEDDGDGFERKHLDVIENKMEQKALRLPVAKINLKGGSRVPMRPLEVRPIDQRIITFAKSHPVLWRKSADPEFNSIDEQTRKSLWQNFWKSAPNYACEYLVERWQQMYEMYKSFRLKSIKEKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPSGTDFAGNLKDMPDDKQFCQQLVLAMRAYPTLWNPRHVDYSDVGARERLWPEVARRLPRFKRDAQACKLRWQMAKFAYECYLREMESHPRVNERKLQKLRSNFPLEEMRFLNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
iTF_00596587; iTF_00504629;
80% Identity
-