Basic Information

Gene Symbol
-
Assembly
GCA_000005135.1
Location
CH954179.1:17933560-17937723[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.00055 0.44 10.7 0.1 21 45 786 808 775 809 0.85
2 2 0.00024 0.19 11.9 0.1 23 44 1062 1085 1053 1087 0.87

Sequence Information

Coding Sequence
ATGAGTAGCAGTACGCCGGGGAGCGAAGGTGCCCTGACGAAGGTAGCGACGCCTTCGCCATCGCCACTGGCCAAAATGGAAGCGGATTTTACGAGCTCCAAGTTCGAGATGCACCCCTCGCTTTCGGACGAGGAACGCCGCTTCTACATAAAGATGTACCCCAACGTGGATCTGGTGAACCAGCGAAGGGTGCACTGCACCGTATGCAAACTCCACCTGGGCACAGCCCCCGCCGCCGAAAGCAACATCAAGATGCATCCCATATTGAGGGTGACGCACTGCGTCAAGTGCCacgatttctacaacagcgGCGAGTTCTCCAAGGGCGAGGATGGCTCTGAGCTGTACTGCCGCTGGTGCGGACAGGGTGGCGAGGTATACTGCTGCTCCACATGCCCGTACGTCTTCTGCAAGTCGTGCATTGTGAAGAATCTTTCCAAGGGCGTCATCGTGGACATCGAGCAAAACGAGCACTGGAACTGCTTCAGCTGCACCTCCAAGATCCTCTGGCCACTGCGCGCCCAGCACTGGGCGCTGGTCAACTACCTTCAGACGCAGAAAAGAGCCCTGCAGACCCTACAGCTTCCCGAGGTGGAGGCCCGACGCCAAATGCTGAAGGATAACAGTAACTGCTGCCGCCTGGCCAAGTCGAAAACTAGCAGTTTATCCGACTCCATGGAGAGCTTGGAGTCCAATGTCTCCAAGCGCAGTCAGGGCAGCTCAGGCTCGAGTAAACGAGGATCCTTGCCCAAAACGATCCCTTCGGGACCGCCAGCCAAACGTTCAAAAGCTTCCAACGACGAGGTGGTCTGCACACCGGATTTGCTTAGCATGCTGGAGCCGGATTGCCAGCTCTCTGTAACCCCCAAAGCAACTGGCCGTCAGTCGGTGCCAGCGGCGAGTATCACAACCACTCCGAGAATTGTTACCGTCCAGCAGAACTACCAACCGGGACCAAGTTCCagtaacagcagcagcaatggaAGCACAAGTGGTTCTTCATCGGTGCCACCGCCACGTAGTAGCCTGCCACCTCCTCTGGTGCTCAGTGGATCTGGAATCCGCTACCGCCAAAATGCGCCTGGTGGGGTCTCAGGTGTGGTGCGTCGCACTGTAGTCCCCAACTCGGTGAAGACCACTGGGCCAGTCTTTCACACTATCAATGGGTTCAAAGTGGATTTGAATAGCGCTGCACAACAGGATTCCTACCGCCTGCCCAACGGTCGACTGATTCAAGTTAAACGTCAGCTACCCCAGGCCACTCAGCcggcaccagcaccaccaccaacaccaccaacaCCGCCTGCCTTGGTCGTTCCTCAAGTGGGACCGGGTGTGGTTATCCGACCGCGCGCTCCGGTTACGTCTAATAGGCCTTCACTGCATATCAGCACATACGGCTCTAACATGGGCATCTATAACCCGCAGACgaaccagcagcagcgggcTCCGCATGTACGAGTTGGAAACGCCAATCCAGCTCCTCCACCGCTACAAGGTCCTCCGCCCAACGTCAATGGCGGTCAAACTCTCATGATTACTCCAGCACCTCCACCCCCGCCTAAGGTTCCAACTTTGGTACGCCACACCTTCCCAAACACGCCAATGGGACAGGCACGGGCGCAGCTGCAGGAGCAAATCTTTAGCGCCATGGACATCTGCACACACCTCACCGGCAAAGTGGTATCCCTTACCCACTCGAACGCCTACAACCAAGTGCGCAGTTATCTGGAACTGAAGGAGCTATACATCCACATGTCTTATTTGATGACCTATGCGATTGGGCGGTTCAAGAACTTGCAGGAGAAATGTTTGGTGGACATGCGAGAGAAGGGCTTCAAGAATGACGCCAACAGTCTGGAGAATGGTCAACTAGCTGCTGCCGTTGATTATGTGTGCTATGGCCAACTGGATGACGTGGATCTCTTCAACACAGGATGCAATAGTTTTCACAATCAGGTCTACGAGTACCGCAAGAGCTTGCACGCCAATCTTAAGGAAGGCGAGGACTGCGAGCCACTGCCTCCGCTGATGCCACTGGGAGTTCGAGCCGAAGGTGATCCCATCGATGAGCCCGAGGAACCAGAAACGGTACCGGAACAGCAGCAAGATGAGATCGGAAAGGACCACGAAGAAGCGCCTGATTTTGATTACGATGAGCCAGATGAATTGGATGATGATCTGGATGACGATGACTTGGACAACGAAGAGTGTGGTGAACTGGGAACCGAAGAGAGCATGAATCGGAATGAACAGGCTCACGCATACGATCGAAAGTTAACGCGACTTCTTCGCGAGTATCCTTCGTTGTGGTGCACCCGTCATCCCGATTACGGCAAGAAAGAGGTCACCAATAAGCAGTGGCGGGTGATTGCCAGTCACTTTCCTCGCGGCGATGACATTAAGCTGCGCTGGAAGAACGTAAGGAAGCGATACGTTCGGATTGAGAGGCGCTTAAAGCAGGGAAAGCGTTTCAAGGGCTACTTCGATAAGGCCACAAACTATCTGGAGAACAGGGATCGACCGCGGAGCGAGTGGCTGGCTGTGGACTGCGGCGAAGATGACGGCGACGGGTTCGAGCGCAAGCATCTCGACGTAATTGAGAATAAAATGGAGCAAAAAGCACTGAAGCACCCAGTAGTTAAAATCAAGCTAAAAGGTGGCCGAGTGCCGATGCGCCCACTCGAAGTGCGTCCTATTGATCAACGCATCATAACTTTCGCTAAAAGCCATCCAGTATTATGGCGCAAATCCGCTGATCCCGAATTCAACAGTATTGACGAGCAAACCAGAAAGTCCCTGTGGCAGAACTTTTGGAAGTCGGCGCCCAaTTATGCTTGCGAGTATCTTGTGGAGCGTTGGCAGCAAATGTACGAGATGTACAAGTCCTTTCGCCTGAAGAGTATTAAAGATAAGGGCATCTTTGCGAATCTGGAGCTAAAGTACTCAAAGTACTTGGCCAGCTTGTATTTCCTGTACAAGATCGATGAGCAGGACCTCCGCGATGAGTTCGAGCCACTGCAGGACTGTGTCCCGACCGCCACAGAGTCAGCTGGAAACCTTAAGGATATGCCCGATGACAAGCAGTTCTGTCAGCAACTGGTTTTGGCCATGCGGGCATATCCCACACTTTGGAATCCACGGCATGTGGACTACAGCGATGTGGGAGCCAGGGAGCGCTTATGGCCGGAAGTGGCCAGGCGGTTACCCCGATTCAAGCGGGACGCCCAGGCCTGTAAGCTCCGCTGGCAGATGGCCAAGTTCGCTTACGAGTGCTACCTACGCGAGATGGAGCGTCATCCGCGGGTCAACGAGCGCAAGTTGCAGAAGTTGCGCTCCAACTTTCCGCTCGAGGAGATGCGCTTCCTCAACATTTAG
Protein Sequence
MSSSTPGSEGALTKVATPSPSPLAKMEADFTSSKFEMHPSLSDEERRFYIKMYPNVDLVNQRRVHCTVCKLHLGTAPAAESNIKMHPILRVTHCVKCHDFYNSGEFSKGEDGSELYCRWCGQGGEVYCCSTCPYVFCKSCIVKNLSKGVIVDIEQNEHWNCFSCTSKILWPLRAQHWALVNYLQTQKRALQTLQLPEVEARRQMLKDNSNCCRLAKSKTSSLSDSMESLESNVSKRSQGSSGSSKRGSLPKTIPSGPPAKRSKASNDEVVCTPDLLSMLEPDCQLSVTPKATGRQSVPAASITTTPRIVTVQQNYQPGPSSSNSSSNGSTSGSSSVPPPRSSLPPPLVLSGSGIRYRQNAPGGVSGVVRRTVVPNSVKTTGPVFHTINGFKVDLNSAAQQDSYRLPNGRLIQVKRQLPQATQPAPAPPPTPPTPPALVVPQVGPGVVIRPRAPVTSNRPSLHISTYGSNMGIYNPQTNQQQRAPHVRVGNANPAPPPLQGPPPNVNGGQTLMITPAPPPPPKVPTLVRHTFPNTPMGQARAQLQEQIFSAMDICTHLTGKVVSLTHSNAYNQVRSYLELKELYIHMSYLMTYAIGRFKNLQEKCLVDMREKGFKNDANSLENGQLAAAVDYVCYGQLDDVDLFNTGCNSFHNQVYEYRKSLHANLKEGEDCEPLPPLMPLGVRAEGDPIDEPEEPETVPEQQQDEIGKDHEEAPDFDYDEPDELDDDLDDDDLDNEECGELGTEESMNRNEQAHAYDRKLTRLLREYPSLWCTRHPDYGKKEVTNKQWRVIASHFPRGDDIKLRWKNVRKRYVRIERRLKQGKRFKGYFDKATNYLENRDRPRSEWLAVDCGEDDGDGFERKHLDVIENKMEQKALKHPVVKIKLKGGRVPMRPLEVRPIDQRIITFAKSHPVLWRKSADPEFNSIDEQTRKSLWQNFWKSAPNYACEYLVERWQQMYEMYKSFRLKSIKDKGIFANLELKYSKYLASLYFLYKIDEQDLRDEFEPLQDCVPTATESAGNLKDMPDDKQFCQQLVLAMRAYPTLWNPRHVDYSDVGARERLWPEVARRLPRFKRDAQACKLRWQMAKFAYECYLREMERHPRVNERKLQKLRSNFPLEEMRFLNI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00480108;
90% Identity
iTF_00619092;
80% Identity
-