Basic Information

Gene Symbol
-
Assembly
GCA_018902025.1
Location
CM032166.1:30534042-30534909[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.3 7.4e+03 -2.4 0.0 70 86 7 23 2 24 0.71
2 3 5.4e-11 4.9e-08 33.4 0.0 20 89 117 179 98 179 0.80
3 3 2.1 1.9e+03 -0.6 0.1 72 86 222 236 202 237 0.74

Sequence Information

Coding Sequence
ATGTTTAAATGCCAAAAGTGTGAAAATTTCGAAACAAATGTGCAAAAATGTTTCAAGAGGCACATGTTGACCCACACCAAGGTATATGAAGGGCCATACAAATGCTCCTTCGAAAAATGCAACTTTAGGACATTTACCAAGCGGTATCTGCCTAACCATGTGGCAAGGAAGCACCCGGCACGAACGCCTGAGAAGCCCGACGCCCCCGCTCCAGTCCCAGTGCCGATAATGGAAGAGGAGGAGGACTTTCATCCCCTACCCTCCATGGAGTCTGCGCCAGAGTCCCAAGAAGAATTGGAGCTCCAATGTGGGCTCAAATGGATGAGCGTGGCCGGGCAAAAGAAATATTTCTTTAAGTCCATACCGCCAGTCGAGAATGATACTGGTGTGGATCTATTCAGTTTGTATATGTCCGTAGAGGGTCGGGGTGGGTTTGATAGCCCACCCAATTGGAAATACGTGGCCCGGAGGTGCAACCAAATGGCCTCCTGGAAAATGCTGCCAGGAGTGTATGAAAAATACCTCCTGGCATACGAGGACCAGGAAAGAAAGCGATTGCGGGACCTCAAAAATAGCAATATACCGTTCTGGTGGGACTACGGTGAGTATGTCTCTAAGACATACCAGCCAGTCCCACACAGACGAAAGCCATATGATGTTTGTACAGTGGAGAACACGCTGTATAAGATATACTACAATTATTTTATACCCAGCATTGGGACACGCTTCTGCGTTAAAGATTCGTGGTTGTATATAGTTAGAATGGATCCGCAGGATCTTGTAGAATATATGCGTAGTTTTAAGTAG
Protein Sequence
MFKCQKCENFETNVQKCFKRHMLTHTKVYEGPYKCSFEKCNFRTFTKRYLPNHVARKHPARTPEKPDAPAPVPVPIMEEEEDFHPLPSMESAPESQEELELQCGLKWMSVAGQKKYFFKSIPPVENDTGVDLFSLYMSVEGRGGFDSPPNWKYVARRCNQMASWKMLPGVYEKYLLAYEDQERKRLRDLKNSNIPFWWDYGEYVSKTYQPVPHRRKPYDVCTVENTLYKIYYNYFIPSIGTRFCVKDSWLYIVRMDPQDLVEYMRSFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00503040;
90% Identity
iTF_00503040;
80% Identity
-