Basic Information

Gene Symbol
-
Assembly
GCA_018150345.1
Location
JAECWI010000966.1:3537409-3538168[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.5e-11 4.3e-08 33.5 0.1 20 89 96 158 76 158 0.79
2 2 1.6 1.5e+03 -0.3 0.1 72 86 201 215 181 216 0.74

Sequence Information

Coding Sequence
ATGTTGACCCACACCAAGGTATATGAAGGGCCATACAAATGCTCCTTCGAAAAATGCAACTTTAGGACATTTACCAAGCGGTATCTGCCTAACCATGTGGCAAGGAAGCACCCGGCACGAACGCCTGAGAAGCCCGACGCCCCCGCTCCAGTCCCAGTGCCGATAATGGAAGAGGAGGAGGACTTTCATCCCCTACCCTCCATGGAGTCTGCGCCAGAGTCCCAAGAAGAATTGGAGCTCCAATGTGGGCTCAAATGGATGAGCGTGGCCGGGCAAAAGAAATATTTCTTTAAGTCCATACCGCCAGTCGAGAATGATACTGGTGTGGATCTATTCAGTTTGTATATTTCCGTAGAGGGTCGGGGTGGGTTTGATAACCAACCCAATTGGAAATACGTGGCCCGGAGGTGCAACCAAATGGCCTCCTGGAAAATGCTGCCAGGAGTGTATGAAAAATACCTCCTGGCATACGAGGACCAGGAAAGAAAGCGATTGCGGGACCTCAAAAATAGCAATATACCGTTCTGGTGGGACTACGGTGAGTATGTCTCTAAGACATACCAGCCAGTCCCACACAGACGAAAGCCATATGATGTTTGTACAGTGGAGAACACGCTGTATAAGATATACTACAATTATTTTATACCCAGCATTGGGACACGCTTCTGCGTTAAAGATTCGTGGTTGTATAATGTGTAG
Protein Sequence
MLTHTKVYEGPYKCSFEKCNFRTFTKRYLPNHVARKHPARTPEKPDAPAPVPVPIMEEEEDFHPLPSMESAPESQEELELQCGLKWMSVAGQKKYFFKSIPPVENDTGVDLFSLYISVEGRGGFDNQPNWKYVARRCNQMASWKMLPGVYEKYLLAYEDQERKRLRDLKNSNIPFWWDYGEYVSKTYQPVPHRRKPYDVCTVENTLYKIYYNYFIPSIGTRFCVKDSWLYNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00618139;
90% Identity
iTF_00618139;
80% Identity
-