Dvul027064.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila vulcana
Gene Symbol
RREB1
Assembly
GCA_008042555.1
Location
VNJP01009580.1:84763-90871[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.027 3.6 8.8 0.8 1 21 265 285 265 287 0.93
2 11 0.0026 0.36 12.0 0.1 1 20 297 316 297 318 0.94
3 11 1.5 2.1e+02 3.3 3.7 2 19 522 539 522 541 0.97
4 11 0.0062 0.84 10.8 0.1 1 23 688 710 688 710 0.97
5 11 9.1e-06 0.0012 19.7 0.7 1 23 720 742 720 742 0.99
6 11 0.00061 0.083 14.0 2.0 1 23 748 771 748 771 0.97
7 11 0.0022 0.3 12.2 2.0 1 23 1019 1042 1019 1042 0.95
8 11 6.4e-05 0.0087 17.1 0.3 2 23 1436 1457 1435 1457 0.97
9 11 0.11 15 6.9 6.3 1 23 1463 1486 1463 1486 0.97
10 11 10 1.4e+03 0.7 2.8 1 23 1612 1635 1612 1635 0.83
11 11 7 9.5e+02 1.2 4.1 8 23 1691 1706 1690 1706 0.93

Sequence Information

Coding Sequence
ATGCTCGCAactcagcagcaacaacaacaaccgcagcccggcagcagcagcaacaacaagaacaataGCGTAGCCgccgccacacacacaatgatgaacagcaacaacacagaCTTGGTAGAGATGGAGCGTAAGCGAAGAGAGTCCACAACATCAGAATCCTCTCTCGAGCATCTCGACCTGGGACGAACGCCAAAGAAGCTCAGCGGCAGCGCCGGTGCTGCGCAGTCGACATCGACGCCGCACGAAGTGGCAGCGACGTCGCGCAAGCGCAAGCTGcgccagctgcagcagcagcaccaccaccagcagagTCGTTCGGATCTCCTTagcgatgaggatgaggacgaggaggaggaggcacgTCCCCTCAATCGTCACAAACAGCGACGGGGAGCCCAGGGTTCCACCTcttccgcctccgcctctgcctctgcctccaTTGTGGTGGACTACTCCGCCGGTGATGCTAGTTCGCTGCGCAAGAAATTCCGTCTCAATCGCTCGGCAGCGGCCAGTCTCTCGGAATCGGGATTCGTGGATGCCAGCAGCACTGCCCACAGTGGCTATCTGGGcaacaatagcagcagcagcgccagcacaAGCCTGGCAGTGCCTTCAGTTGCCACAAAcgctgctgccgccaccgGTGGAGCAGCTCCCACCGTCTCCGCCTCTGCCTCGAGTAGCAGCACCAGCAGTCACAGCAGTTCCTCCGGTGGCTCCTCACCGCAGGGCCTGTGCCTGTCCAGCGGCGAATCGGGCATTGGGGCAGGGGACGAGCACATGAAATATTTGTGCCCCATCTGCGAGGTGGTATCCGCCACGCCGCACGAGTTCACCAATCACATTCGATGCCACAACTATGCCAATGGGGATACGGAGAACTTCACCTGTCGCATCTGCTCTAAGGTGTTATCTTCGGCCTCATCCCTCGACAGGCACGTGCTGcagcagcagcagcaccagcagcagcagactcATCCCGCCCAGCAGCAGTCACAGCAGCAAACGCTGGCCAGCTCCATGCCAGTGCGGGCGGAGAGCTATGAAAGCGATGCCAGCTGCTCCACGGATGTGTCTAGTGGTAAtagtcgcagtcgcagcagtAGCTTCCtcctcaacaacaacaacaactcccACAAGgctaccaacaacaacaacagaagcaacaacaagcaggagctgcagggaTTGGAGGAGCAAGACCAGGAGCTAGAaatggagctggaggagaacAAGCAGCTGCTACAGCGTCGCCTGAAGACGACCATTAACAACAATGTGATCGAAAACCATGCGGATGAGGAGGCGGAGGATCATCTTCATAACGAGGATATGGAGGATACAGATGCGGATGTGGCCATGCTCACAAGCACTCCGGATGTGGCCACACTGCTGGCAGGAGCCAGTGCCTCCGGTGCTGCCTCACGTTCGCCCTCACCCTCGCCACCGGGCTCGCCAGGCTTGCTACTGAGTTGCCCCGCCTGCGGTGCCTCCGAATTCGACAACCTGCCAGCTTTGTGCGCCCATCTGGATGCCCGGCATTCAGATATACCGGCCAAGTGTCGGGATTGTGAGGTGATATTTGCCAGCCATCGCCAACTGCAGGCACACTGCTGCAGGGGAGGATCTGCCTTGGGCGTGGGACTGCCGCCCATGTTGGGCGCCAGCAGTTCGCCGCTGCATGCCGACGAGGATGCCGAGGATGAGGAAGAGGCGGATCATGATGATCATGATGAGGAGATGGAGCAAAAGCGTGATGACTTCTTCCACAAGCTGTACTTGAAGGGTACCTCGGGTGGAGCGGGTGCAGCGGGCAATATCTCCCATCCACCATCGCCCATTAAGCACGAGCCGGCGGACAGCAAGGATTTGGCCGATATACAGAGCATCCTAAACATgaccagctccagctgcacCAGCAGCTTCCTGCGCAACTTTGAGCAGTCGGTGAACACGCCCAGCTCCAGTCAATATAGCCTGGATGGTCGCgatcaggaggaggaggcccaGGATGCCTTCACCTCGGAATTCCGACGAATGAAGCTGCGCGGTGAGTTCCCCTGCAAGCTCTGCACGGCTGTCTTTCCGAATCTGCGCGCCCTCAAGGGTCACAATCGGGTGCATCTCGGTGCTGTTGGACCCGCCGGACCCTTTCGCTGCAACATGTGCCCTTACGCCGTCTGCGACAAGGCGGCCCTCGTCCGTCACATGCGCACCCACAATGGCGACCGGCCGTACGAGTGCGCCGTCTGCAATTATGCCTTCACCACCAAGGCCAACTGTGAGCGCCATCTGAGGAATCGTCACGGCAAGACCAGTCGCGAGGAGGTGAAGCGTGCCATTGTCTACCATCCCGCCGAGGATGCAGGCTGCGAGGATAGCAAATCCCGGCTGGGTGAGGATCTCGCCGATATAAGTTTCCGCTCAATAAGTCccacaccgccgccgctgccaccaccactgccactgcccCCGCCGTTAAAGATTCAGGTGAAGAGCCTGGATCAGCTGGTGGACAAGAAACCAGCGGCAGTTCAACAGCCGGAGaagagctcctcctcctccgctttGGACTTTAGCATGGATGTGTTGGATCTCAGCAAGAAGCCAACGGGTGCAGCCACCACTCCaacgcccacacacacgcccTCGCTCACGCCAGCGCCACCTTTAGTTGGAGCATCTGCTGTGGTTGCTCCTCCGGCTGCCGATCTGGCCGCCGCTttggaacaacaacaattgctaCTGGCACAGCAGCAACTCTTTGGCGGTGCCGGTGACGCGGCCTCCCAGTACATGCAACAGCTGTTCCGCAGCCTGGTGTTCCAGTCCCAAACGCCGGGCTTTTCCTTCTTCCCCTTCATGGCCCCACCGCCGCCGGAGGTCAACCAAGAGAAGCCGCCACTGGTGAGTCCACCGTCGCGTATGAACCCACTGCCCGTAGGCGTGGGTGTGCCCGTACCGCCCGGCGGACCCGTCAAAATGGTCATCAAGAATGGCGTCCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAACGTCCCTTTGCCTGTGAGCATTGCTCCGCCCGATTTACGCTGCGCTCCAACATGGAGCGACATGTGAAGCAACAGCATCCACAGTTCTATGCCCAGCGACAGCGCAGTGGTCACCATGTGATGAGGGGCAGGGGCGCATCGaatgccgccgctgctgctgctgctgctgccgctgcagcggctgcCATGGGTCCAACGGGAGGATCCGGctcccatcatcatcatcatagcCACAGCCATAaccatggacatggacatgggcaTGCACCCATTTCCGAGCAGGTGAAGTACGCCATTTTGGCGCAACAGTTGAAGGCGCACAAGAACACCGATTTACTGCAGCAGGCCTTGGCCCATGGCTCCAGCAGTGTGGCCGGGAATCCCCTCCTGCATTTCGGCTATCCGCTAGGCCCCGCACCCGGGGCTTCGCATGTGAGCAGTCAGGGAAATAACGGTCAGACGCCCATGGCCATGGACGATGATGAGCCCAAGCTGATCATCGATGAGGATGAAAATGAGCACGACCACGAAGTGGAGCCGGAGGATGTGGATGATTATGAGGATGAAgaagacgaggaggaggatgagccTGAAGATGAGCCGGAGGTGATTCTAGACGAACCTCGAGTCGTTGTCGTGGAAAAGGAGGAAgcgcaggaggaggacgacgaggaggaggaggaggagtcagAGCTACCCAAGCCCCTGGAGCAGCTTAGCGCCATGTCCAAGTCCAGCCCAAGTCACAATGAAGCTGCCCAGAAGATGGCCGAGACCATCCTAGAGCAGGCCATCAAGGCTGGCATCAAGCAGCCATCAGCAACGACTCCGGTGTCCTCAGCAGCGGCGTCTGCATCGTCCATCCAAGAGGAGAATCCTCCAGCAGCTGTAACCCCACCGGCTGCCATGCAGGAGCCCAGCAGTAATCCCAGCAGCCTCAAGACTATGATTGCCCAGGCCGAGTCGGTGGGCAAGTCGCTAAAAGAGGTGGCCAGTTCGCCGTTCAAGGATGAGTCCCAGGACCTAGTGCCAGTGGCAAAGCTGGTGGACAATGCCACCAGCCAGAACATGAGCTTCAACAGCTACTTCCGACCCAGCGACGTGGCCAATCACATGGAGCAGAGCGACGAGGAGGGCCTGGTGGCCTCTGGCAGTGCCAGCGagagcaacaacagcggcacCGAGGATGtcaccagctccagctccagcagcgAGCCAAAGAAGAAGTCTGCGTACAGTTTGGCTCCGAATCGTGTCTCCTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCCCTGCGCCGCCACATTCTCACCCATACCGGCCAGAAGCCCTTCAAGTGCTCCCACTGCCCTTTGTTGTTCACCACGAAGAGCAACTGCGACCGCCATCTGCTGCGCAAGCATGGCAACGTTGAGTCCGCCATGTCGGTCTATGTGCCCACCGAGGATGTTAGCGAGCCGATACCGGTGCCCAAGTCCGTGGAGGAGAtcgagctggaggagcagcgtCGCCGTCAGGAGGCGGAGCGCGAAAGGGAGCGTGAACTGGAGCGTGAGCGTGAGCTGGAGCGAGAGCGTGAGCTGGAACGGGAGCgtgagctggagaaggagaaggagcggGAGCGTCAGCAGCTTATCCATAAGCTGGCCGCACAGATGAGTGCCgctgcggcagctgcagcagccgctgctgctgctactactGGCTCATGTGCCTCGCCAGGCAATGGATCGTCCGCTGGACCGGGAGGTGATCTTTCCGCCGGCGGTGATTTGCCCTACAAGTGCCACCTGTGCGAGGGCTCCTTTGCTGAGCGTTTGCAATGCCTGGAGCATATCAAACAGACGCATGCCCACgagtttgctttgcttttggccaagGGAGCCATCGAGAATGAATCGCTGCACTCCAACGACTCATCGAAtccccagcagcaacagcagccacaacacCAGCACTCGGACGATGAGGCCACCAATGGTTTGGGCCGTGGCAAATATCCGGATTATAGCAACCGCAAGTTCACCCTCAAGCACAGCATGCTGCGTCACATGAAGAAGCACAGTGGACGGGCCCATAATGGGGATACGCCTGGCTCTGATTGCTCCGATGATGAGATGGcaatgagcagcagcagtccgcCGGGTACACCGGCTCCCTCTCCCATGCCGATACCCTCCAgcgccaacaacaataacagctgccagaataataacaataataataataacaacaacaataataataataataacaataataacaacaacaagcttGGGCTGAAGCTACCCAAGCTGCACGAGCTGCTGGACAAGGCCAATGAATGGCGAGCAAGTCGACTGGGCGAGCACAAGGAGAACCTGGGCGAGGCAACGCCCTcgggagcagcggcagccggtTCGGATTTGATTGGTAACCTTTTGGGGATCAGCGATCAGGGCATACTCAACAAGCTGCTGTCCTCCGCCGATGAGGCGGCCAAGCTTCTGGGCGTGGACAACAAGTGA
Protein Sequence
MLATQQQQQQPQPGSSSNNKNNSVAAATHTMMNSNNTDLVEMERKRRESTTSESSLEHLDLGRTPKKLSGSAGAAQSTSTPHEVAATSRKRKLRQLQQQHHHQQSRSDLLSDEDEDEEEEARPLNRHKQRRGAQGSTSSASASASASIVVDYSAGDASSLRKKFRLNRSAAASLSESGFVDASSTAHSGYLGNNSSSSASTSLAVPSVATNAAAATGGAAPTVSASASSSSTSSHSSSSGGSSPQGLCLSSGESGIGAGDEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKVLSSASSLDRHVLQQQQHQQQQTHPAQQQSQQQTLASSMPVRAESYESDASCSTDVSSGNSRSRSSSFLLNNNNNSHKATNNNNRSNNKQELQGLEEQDQELEMELEENKQLLQRRLKTTINNNVIENHADEEAEDHLHNEDMEDTDADVAMLTSTPDVATLLAGASASGAASRSPSPSPPGSPGLLLSCPACGASEFDNLPALCAHLDARHSDIPAKCRDCEVIFASHRQLQAHCCRGGSALGVGLPPMLGASSSPLHADEDAEDEEEADHDDHDEEMEQKRDDFFHKLYLKGTSGGAGAAGNISHPPSPIKHEPADSKDLADIQSILNMTSSSCTSSFLRNFEQSVNTPSSSQYSLDGRDQEEEAQDAFTSEFRRMKLRGEFPCKLCTAVFPNLRALKGHNRVHLGAVGPAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKRAIVYHPAEDAGCEDSKSRLGEDLADISFRSISPTPPPLPPPLPLPPPLKIQVKSLDQLVDKKPAAVQQPEKSSSSSALDFSMDVLDLSKKPTGAATTPTPTHTPSLTPAPPLVGASAVVAPPAADLAAALEQQQLLLAQQQLFGGAGDAASQYMQQLFRSLVFQSQTPGFSFFPFMAPPPPEVNQEKPPLVSPPSRMNPLPVGVGVPVPPGGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASNAAAAAAAAAAAAAAMGPTGGSGSHHHHHSHSHNHGHGHGHAPISEQVKYAILAQQLKAHKNTDLLQQALAHGSSSVAGNPLLHFGYPLGPAPGASHVSSQGNNGQTPMAMDDDEPKLIIDEDENEHDHEVEPEDVDDYEDEEDEEEDEPEDEPEVILDEPRVVVVEKEEAQEEDDEEEEEESELPKPLEQLSAMSKSSPSHNEAAQKMAETILEQAIKAGIKQPSATTPVSSAAASASSIQEENPPAAVTPPAAMQEPSSNPSSLKTMIAQAESVGKSLKEVASSPFKDESQDLVPVAKLVDNATSQNMSFNSYFRPSDVANHMEQSDEEGLVASGSASESNNSGTEDVTSSSSSSEPKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPTEDVSEPIPVPKSVEEIELEEQRRRQEAERERERELERERELERERELERERELEKEKERERQQLIHKLAAQMSAAAAAAAAAAAATTGSCASPGNGSSAGPGGDLSAGGDLPYKCHLCEGSFAERLQCLEHIKQTHAHEFALLLAKGAIENESLHSNDSSNPQQQQQPQHQHSDDEATNGLGRGKYPDYSNRKFTLKHSMLRHMKKHSGRAHNGDTPGSDCSDDEMAMSSSSPPGTPAPSPMPIPSSANNNNSCQNNNNNNNNNNNNNNNNNNNNNKLGLKLPKLHELLDKANEWRASRLGEHKENLGEATPSGAAAAGSDLIGNLLGISDQGILNKLLSSADEAAKLLGVDNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491706;
90% Identity
-
80% Identity
-