Basic Information

Gene Symbol
-
Assembly
GCA_008042555.1
Location
VNJP01010458.1:106650-110597[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.0037 4.6 8.0 0.0 1 45 31 90 31 91 0.86
2 4 0.0015 1.8 9.3 0.0 1 33 160 203 160 207 0.79
3 4 0.62 7.7e+02 0.9 0.0 4 18 288 302 288 307 0.83
4 4 0.23 2.8e+02 2.3 0.0 27 43 328 344 324 347 0.82

Sequence Information

Coding Sequence
ATGGACGACAATGAACTGGAGCAAAAGTACTCGGATTATCTTGGAAACTCGAATCATACGAGCGTGGAAAACAGTCCCGGGAAAGCCACCCGCTGCCGTTGGACCGACGAGGAGGTGGAATCCTTCTTTGGCATCATCAGTCAACTGAAACTGCAAACTCCGTTGAGGAAGACCCGCAATGCCAAGGTGTTCAAAGTGATTGCCCGGGAAATGGCCAAGCGGAACTGCCCCAAGAGTCCCAAGCAGCTGAGGATCAAGTACCACCAGCTAAGGCGTCAGTATGCGCGGGCCAGGAACGGCGGCGAGACCTTCGATCACTTTGCAGAAGTCCACGAACTGGTCCAGGGGAATGAGTGCTCCGATTTCGAGGCCGAGCTGGAGAGTGAAAGCGACGCGGAGCCGGAAGAGGATCTGGCCTCGGAGAGCGAAGAAGAAGATGCCCTAGAAGCCTCTTCTTCGTCGATTCACACCAACGCCCGCTGCAAATGGACCGAGGGCGAGGTGGACCTCCTCTTCGACCTTATCCACACCTTGGGCCTCCGGTCGGCGCTGCTGCGGAAACGGAATGCCAAGGTCTTCCGGTTGCTGGCCAAGGAGATGGCCAAGCGGAACTCGAACAAGGGTGCGGACAAGCTGCGCATCAAGTTCCAGCTGCTGCGACGAATGTACAATAAGGTGAAGAACGGCACGGGCGATACCTTCGAGCACTTTGAGGCCATGCGACAGGTCCTGGATCCCACCGAGGAGGAAGCGGCGGCAGCCGAGGCAGAGGCCAATGTCAGCAGTGCCAGCGAGGGCAGCGAGTTCAATGACAGCGATGACGACGAGGGCGATGCTACGCAGAGAAGCGGATCTCACTTTTGGACCGACGAGGAGGTGGATGCCTTTTTGCTCATCATCCGGGACAACGGTTTCTTTCGCGCTTTGGACGGCTCGCGGAAGCGCAATTTTCAGACCCTGGTACACATTTCAAATATTCTGGCCAAGCAGGCCATCAAGAGGACACCACACCAGCTGCGGAACAAGCTGAGATTGCTATTCAAGCGGCATCGCGAGGCCAAGGAGCATGGCCTGGACAATGTCCGGATACTGCCCCGCCACTTTAAGCTCTTCGACGAAATTACCGGTGCTCCGTCGCGGGAAAACAGGAAACGGGTCAACCAGAGGCCCCTGCGACCGCTTAAATCATCGCTAACCAAGCAATCTCCGGTGAAGCTTCAGCCGGAGAGTGACAGCGAGGAGGAATCCAGCTCCACCTGCGATCTGTTGCGAGCTGCCGGCGATGATTACGATGAGGATTTCGATGATGCTGCCGGGGAAAAGGAGCCCACACCCCTGGAATCTCTCAAGGCGATTATCGAGGGGCAGAAGCATCTGCTGGCACAAATCAAGACCGCCAACGAGGCCCAGCTGCGGCAGCAGCGggaccagcagcaacagttccTCGAACAGGTCACCCAGCTGATGCGACGGGAAAGAGAGGAGACCCTGCGCAGGATCAGCGAAATGCTGGCGTCCccttaa
Protein Sequence
MDDNELEQKYSDYLGNSNHTSVENSPGKATRCRWTDEEVESFFGIISQLKLQTPLRKTRNAKVFKVIAREMAKRNCPKSPKQLRIKYHQLRRQYARARNGGETFDHFAEVHELVQGNECSDFEAELESESDAEPEEDLASESEEEDALEASSSSIHTNARCKWTEGEVDLLFDLIHTLGLRSALLRKRNAKVFRLLAKEMAKRNSNKGADKLRIKFQLLRRMYNKVKNGTGDTFEHFEAMRQVLDPTEEEAAAAEAEANVSSASEGSEFNDSDDDEGDATQRSGSHFWTDEEVDAFLLIIRDNGFFRALDGSRKRNFQTLVHISNILAKQAIKRTPHQLRNKLRLLFKRHREAKEHGLDNVRILPRHFKLFDEITGAPSRENRKRVNQRPLRPLKSSLTKQSPVKLQPESDSEEESSSTCDLLRAAGDDYDEDFDDAAGEKEPTPLESLKAIIEGQKHLLAQIKTANEAQLRQQRDQQQQFLEQVTQLMRREREETLRRISEMLASP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00569629;
90% Identity
iTF_00527246;
80% Identity
-