Basic Information

Gene Symbol
-
Assembly
GCA_018152535.1
Location
NW:12181833-12186473[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.00033 0.32 10.9 0.1 1 45 32 91 32 92 0.88
2 4 0.001 0.97 9.3 0.0 1 33 161 204 161 208 0.79
3 4 0.42 4.1e+02 0.9 0.0 4 18 289 303 289 308 0.83
4 4 0.16 1.5e+02 2.3 0.0 27 43 329 345 325 348 0.82

Sequence Information

Coding Sequence
ATGATGGACGACAATGAACTGGAGCAAAAGTACTCCGAGTATCTAGGAAACTCGAACCACACGAGCGTGGACAACAGTCCCGGGAAAGCCAACCGCTGCCGGTGgagcgaggaggaggtggagtcCTTCTTTGCCATCATCAACCAACTGAAACTGCAAACTCCTTTGAGGAAGACGCGCAATGCCAAGGTCTTCAAGGTGATTGCCCGGGAGATGACCAAGCGCAACTGTCCCAAGAGTCCCAAGCAACTGAGGATCAAGTACCACCAGCTGAGGCGTCAGTATGCCCGGGCCAGGAACGGCGGCGAATCCTTCGAGCATTTTGCACAAGTCCACGATCTTCTACAGGGAAATGAGGGCTCAGATTTTGAGGCAGAGCTGGAGAGTGAGAGTGATGCGGAGGCGGAAGAGGATCTGGCCACGGAAAGCGAAGGAGAAGACACTTTAGAAGCCTCTTCCTCATCGATTCACACCAACGCCCGCTGCAAATGGACCGAGGGCGAGGTGGATCTCCTCTTCGACCTAATCCACACATTGGGTCTCCGGTCGGCGCTGCTGCGGAAACGGAATGCCAAGGTCTTCAggctgctggccaaggagaTGGCCAAGCGGAACAGTAACAAGGGTGCCGACAAGCTGCGCATCAAGTTCCAGCTGCTGCGACGGATGTATAATAAGGTCAAGAACGGCACGGGAGATACCTTCGAGCATTTTGAGGCCATGCGTCAGGTCCTGGATCCCACCGAGGAGGAAGCGGCGGCCGCGGAGGCAGAGGCCAATGTCAGCAGTGCCAGCGAGGGCAGCGACTTCAATGACAGCGATGACGAGGAGGGCGATGTTTCGCAGAGAAGCGGAACTCATTTTTGGACCGACGAAGAGGTGGATGCTTTTTTGCTCATCATCCGGGACAATGGTTTCTTTCGCGCTTTGGACGGCTCACGGAAGCGTAATTTCCAGACCCTGGTACACATTTCCAATATCCTGGCCAAGCAGGCCATCAAAAGGACGCCCCACCAGTTGAGGAACAAGCTAAGATTGCTATTCAAACGGCATCGCGAGGCCAAGGAGCATGGCCTAGACAATGTCCGGATACTGCCACGGCACTTTAAGCTCTTCGATGAGATTACAGGGACGCCGCCGCGGGAAAACAGGAAGCGGGTCAGCCAAAGGCCCCTGCGACCGCTTAAGTCATCCCTACCCAAGCCATCACCAGTGAAGCTTCAGCCGGAGAGTGACAGCGAGGAGGAATCCAGCTCCACCTGCGATCTGTTAAGAGCTGGTGGGGATGATTACGATGAGGATTACGATGATGCTGCCGTGGAGAAGGAACCCACACCCCTGGAATCTCTCAAGGCCATTATCGAGGGCCAGAAACATCTGCTGGCCCAAATCAAGTCCGCCAACGAGGCCCAGCTGCGGCAACAGCgtgaccagcagcagcagtttctCGAACAGGTCACCCAACTGATGCGGCGGGAACGAGAGGAGACCCTGCGGAGGGTCAGCGAAATGCTTTCcccttaa
Protein Sequence
MMDDNELEQKYSEYLGNSNHTSVDNSPGKANRCRWSEEEVESFFAIINQLKLQTPLRKTRNAKVFKVIAREMTKRNCPKSPKQLRIKYHQLRRQYARARNGGESFEHFAQVHDLLQGNEGSDFEAELESESDAEAEEDLATESEGEDTLEASSSSIHTNARCKWTEGEVDLLFDLIHTLGLRSALLRKRNAKVFRLLAKEMAKRNSNKGADKLRIKFQLLRRMYNKVKNGTGDTFEHFEAMRQVLDPTEEEAAAAEAEANVSSASEGSDFNDSDDEEGDVSQRSGTHFWTDEEVDAFLLIIRDNGFFRALDGSRKRNFQTLVHISNILAKQAIKRTPHQLRNKLRLLFKRHREAKEHGLDNVRILPRHFKLFDEITGTPPRENRKRVSQRPLRPLKSSLPKPSPVKLQPESDSEEESSSTCDLLRAGGDDYDEDYDDAAVEKEPTPLESLKAIIEGQKHLLAQIKSANEAQLRQQRDQQQQFLEQVTQLMRREREETLRRVSEMLSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00569629;
80% Identity
-