Basic Information

Insect: Drosophila virilis
Gene Symbol: bab2_1
Assembly: GCA_007989325.2
Location: CM017606.2:2109530-2149312[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.2e-17 2.3e-14 52.4 0.0 1 43 693 736 693 738 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.2e-17	2.3e-14	52.4	0.0	1	43	693	736	693	738	0.95

Sequence Information

Coding Sequence: ATGGATATGACCAAGGACATCATGGATTTTGAAAGGAAGCTCGAGAGCGAGCAGTACGAGCCCAGCGACTACACAATGGTTAATGCCGAGATACCAAAGCAGCCGGAAGTGCAGCCGGAAACGGACACGGAAAGGGCCTACGAAATGGTCAACAAAACATTGGACGAAGCTCCAAACGAACAGCTGTCGTCCGCcgagcagcaacaggcgcAGGCACGGGAGCTGGAGGTCAAGCTggaggaggagcagctggAGAAGCCGACGAGCGTGCTCCATGAACAGCCACTGACGCCGCCGCCACGTCCACTCACCTCCAGCGAGGTGGTGGGCCACAGCGAGCCGCTCGATCCAGAGCTGCGCGTCCAGCTGAGCGCCAAGAAATCCCGCTCGCTGCCCGTCTCCCCGCAGCCGCTGGTCGCGCACAATTTGGCGGCCATTGGACTCTTTGAATTTGGTCAGACGCGCGCCAAGATGatgcagcaggagcagaagaCCAAGCTTGGCCAGAAATTGACCCCAGTGGGAGTCGGAGTTGGTCTGGGCATGGGCAAGAGCTCGCCGGCGGACAATCAACAGTTCTGCCTGAGATGGAATAATTACCAGTCGAACCTGACGAACGTCTTTGACGAGCTGTTGCAAAACGAATCCTTCGTGGACGTGACGCTCGCCTGCGAGGGTCAGTCCATCAAGGCGCACAAAATGGTTCTGTCCGCCTGCTCCCCCTACTTTCAAGCGCTGTTCTACGATAATCCCTGCCAGCATCCGATTATCATTATGCGCGACGTCAACTGGTGCGATCTGAAGGCCTTGGTGGAGTTTATGTACAAGGGCGAGATCAATGTGTGCCAGGATCAGATTAATCCGCTGCTAAAGGTCGCCGAGACGCTCAAGATACGCGGCCTGGCCGAGGTTAGCGCCGGATcgagcgccgccgccgcctcggGTGGCCTTGGAGGCGCCTCGCTGCTGCCCGAGCAGCGCATGACCGTCtacgacgaggacgaggatgaggatgagctCGCCGCAGCTGCGGCCATACTGAGAGCCAGCGAGGAGGACCAGGATGAACATGTGGCGCCCAAACGCGCTCGGCTGCTGGCCAAGCTGCGTGCCGGCGACTCGGCGCTGGATCTCAATCAGCGCCAGCGCAAACGCTCCCGCGACGGTAGCTATGCCACGCCCAgcccgctgccgctgcgcgcCGAGTCACCGCAGCGTACGCCCAGCGCAGGCGCCGGCCTCGGCCAAAGCCAGCCGCTTTCCATGACCACATCGACAATTGTGCGCAATCCGTTCGCATCGCCCAATCCGCAGgccctgcagcagcagcccggcTGCACCTCCAGCGCgtccagcagcggcagcagctcggcCGCCTCCACAGCCGGCAACTCGGCCAActcctgctccagctccaactccaactcggGTGGCTCCTCGGCTGCTAATGCCTATCGTAGCTGCTCGCCGGccccaccgccgccgccgcccgcgGCGCACAGCAATGGCTCCGCCGCGGCACTCAGCTCGCCCACCGGCAAGAACCAAGGCTCGGCTGGCGCTGCGCAggcgcagctgccgccgcacATGGCCGCCGCCGTGGCCGCTGCAGCACATCATGCCTCGGCATCGGCCTCGgtcccgccgccgccgcccagcGCCTCGTCCATGCACCATCATgcggccgccgccgccgcccaacAGCTGGCTGCCCAGCATCAGCTGGCCCACTCGCACGCGGCCATGGCCAGCGCCCTGGGCGCTTCCctcgccgcagccgcagctggcGGCGCCGCTGCCCCGGCCGTTGGAGGCAACAGCGCTTCCTCGGTGGGCGGGCATCACGATGACATGGAAATCAAGCCGGAAATTGCCGAGATGATACGCGAAGAGGAGCGGGCCAAAATGATTGAGACGAGCGGACACGGCTGGATGGGCGCACCGGCAACAGGCGCATCTGTGGCGGACAGCTATCAGTATCAGCTACAGTCCATGTGGCAGAAGTGCTGGAACACAAACCAACAGAATCTGGTGCAACAGCTGCGCTTTCGCGAACGCGGTCCCCTCAAGTCCTGGCGCCCGGAAGCCATGGCCGAGGCCATATTCAGCGTTCTAAAGGAGGGCCTCTCGCTGTCGCAGGCTGCTCGTAAATACGATATACCCTATCCGACGTTCGTGCTCTATGCGAATCGTGTGCACAACATGCTGGGACCCTCATTGGACGGCGGCACCGATCCACGGCCGAAGGCACGCGGTCGCCCCCAGCGCATTCTGCTGGGCATGTGGCCCGAGGAGCTCATACGCAGCGTTATCAAGGCTGTCGTCTTTCGGGACTATCGCGAGATCAAGGAGGACATGAGCGCACATCAATATGCCAATGGACAGGCGCATGGTGCGCACTTTGGTTCAGGCAACCCGACAGCTGCTGCCAATGGGTATCACAGTGCTGCGGTAAAGATGGCGCCGCCCGACGGCAGCAATCCGCTGAGCACGATGACAGAGACGCTGCGCAGACAGATActctcgcagcagcagcagcaccaacagcagcagcagcagcaacagcagcagcagcagtcgccgcATGTGCAGTCGATGAACATGTACAAGTCGCCAGCGTATTTGCAGCGATCCGAGATCGAGGATCAGgtgtcggcggcggcggcggtggcggcggcggccaaGCATCAGCAGAGCGAGCGCCGCGGCGCCGAGAATCTGCCCGATCTGAGCGCATTGGGGCTGATGGGCCTGCCCGGCCTGAATGTGCTGCCCAgcacgcagcagcaggcgggcCATCAGCGCGGCGCAGccggcggcaacggcggcggcggcagcggcggagGCTCCGGTGCAATGCATCCCAGCGCGGCGAGCTATGCGCGCGAGTTGTCGCGTGAGCGGGAGCGCGAGCGTGAGATGTCGCGGGATCGCGAGCTGAAGGAGGCAATGCACGCCCGCCAATATGGCAATCAGTCGCGCGGTTCCAATTCGTCGGCGGGCAGCAAGTCGGCCGCAGGCTCGAGTCGGCCGGGCGCCGCATCGCCCTACTCCGCGCACCACTCGCACGGCCATTATGCCAAGCACGCCAAGGAGCAGCCGGGTTATGCGTATAATAAACGCTTTCTGGAGAGCCTGCCGGCGGGCATAGACTTTGAGGCGATTGCCAACGGTCTGCTGCAGAAGTCGGTCAATAAGAGTCCGCGCTTCGAGGACTTCTTTCCCGGCCAGGACATGAGCGAACTATTCGCCGACGCTGGCACAGCTGCCGGCGCCGGCTCCGCAgcggccgctgcagcagcagcagcagcagcggctgcctaTGCGCCGGCAGCGGCGGCTATGCGCGAGTCCCCATTGATGAAAATCAAgctagagcagcagcaggccgcCGAGCTGCCGCACGAGGATTGA
Protein Sequence: MDMTKDIMDFERKLESEQYEPSDYTMVNAEIPKQPEVQPETDTERAYEMVNKTLDEAPNEQLSSAEQQQAQARELEVKLEEEQLEKPTSVLHEQPLTPPPRPLTSSEVVGHSEPLDPELRVQLSAKKSRSLPVSPQPLVAHNLAAIGLFEFGQTRAKMMQQEQKTKLGQKLTPVGVGVGLGMGKSSPADNQQFCLRWNNYQSNLTNVFDELLQNESFVDVTLACEGQSIKAHKMVLSACSPYFQALFYDNPCQHPIIIMRDVNWCDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGSSAAAASGGLGGASLLPEQRMTVYDEDEDEDELAAAAAILRASEEDQDEHVAPKRARLLAKLRAGDSALDLNQRQRKRSRDGSYATPSPLPLRAESPQRTPSAGAGLGQSQPLSMTTSTIVRNPFASPNPQALQQQPGCTSSASSSGSSSAASTAGNSANSCSSSNSNSGGSSAANAYRSCSPAPPPPPPAAHSNGSAAALSSPTGKNQGSAGAAQAQLPPHMAAAVAAAAHHASASASVPPPPPSASSMHHHAAAAAAQQLAAQHQLAHSHAAMASALGASLAAAAAGGAAAPAVGGNSASSVGGHHDDMEIKPEIAEMIREEERAKMIETSGHGWMGAPATGASVADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGTDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEDMSAHQYANGQAHGAHFGSGNPTAAANGYHSAAVKMAPPDGSNPLSTMTETLRRQILSQQQQHQQQQQQQQQQQQSPHVQSMNMYKSPAYLQRSEIEDQVSAAAAVAAAAKHQQSERRGAENLPDLSALGLMGLPGLNVLPSTQQQAGHQRGAAGGNGGGGSGGGSGAMHPSAASYARELSREREREREMSRDRELKEAMHARQYGNQSRGSNSSAGSKSAAGSSRPGAASPYSAHHSHGHYAKHAKEQPGYAYNKRFLESLPAGIDFEAIANGLLQKSVNKSPRFEDFFPGQDMSELFADAGTAAGAGSAAAAAAAAAAAAAYAPAAAAMRESPLMKIKLEQQQAAELPHED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00616970; iTF_00563098; iTF_00563240;
90% Identity: iTF_00563098;
80% Identity: iTF_00616970;