Dvar009649.1
Basic Information
- Insect
- Drosophila varians
- Gene Symbol
- dmd-4
- Assembly
- GCA_018150405.1
- Location
- JAECWK010000015.1:16773889-16775715[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.1e-26 2.3e-22 78.4 8.5 1 47 43 89 43 89 0.98 2 2 0.46 1.8e+03 -1.3 0.3 23 31 310 318 303 322 0.79
Sequence Information
- Coding Sequence
- ATGGCCAGTATCGGTGGCGGTAGTGAATCTATTGCTGATTCTGGGTCTTCCTCCAAGCGCCCTCGGATAGCAATCAGCTCCAAGAATCTGAAAATAGTGGAATCCCAGCCACCTAAGGCCAACAATCGGGTGCCCAAGTGCGCCAGATGCCGTAATCACGGTATCATTTCCGAGCTACGAGGCCACAAGAAACTCTGCACCTACAAAAACTGCAAGTGCCCCAAATGCATCCTGATCTTCGAAAGGCAGCGTATTATGGCTGCTCAGGTTGCCCTCAAGCGCCAGCAGGCCGTGGAGGATGCGATTGCACTCCGGTTGGTGGCCAACAAAACGGGTCGCTCCATCGAGGCCCTGCCGCCGGGCAATATTTTTGGCATGACCGTGACCCAGCCAAGTTCCCCAACTCGAATAAAGCAGGATGATCAGGAGGAACATCCTTTACCAAAGGAAGTGAAACTACAGAAGGAGGAGCACAACGAACCGCCGGCGGTTTCCCAGGATCTGAGCGGAAGCCGACGGGAGACTGTTTCCCAAACAGCCATCGACATGCTGGCCCAGTTATTTCCACAGCGGAAGCGATCTGTCCTGGAGCTGGTCCTCAAGCGATGCGATCTGGATTTGATCCGTGCCATTGAGAATGTTTCCCAAGCTAGGAAATCCGTAGCAGAGGATGTTCCAAGTAACCAGGGATTTAATCAGCACACAGGATCCAGTCTTTCCACTCTCCCGCTGGTCTCATCACAAAGGAGCAGCGCCTTCAGGCCTGTGGTGGCGGATCAGTTCCAGAACAAATCCCTGGTGGAGCTGAAGCCTCCAACTTTTGGGAGCAGCACTTCCGCCGCAGCTGCCGCCATCTGCGGCTACCCCAAGTGGTTTGTGCCGCTCTCCTTTCCGGTGGCCATGGGCCACCTCTCCAACCTGGCGCCGCGATGCACTCTGCCCAACTGCGCCTGCCTGGACAGCTACCAGTTCCACTAG
- Protein Sequence
- MASIGGGSESIADSGSSSKRPRIAISSKNLKIVESQPPKANNRVPKCARCRNHGIISELRGHKKLCTYKNCKCPKCILIFERQRIMAAQVALKRQQAVEDAIALRLVANKTGRSIEALPPGNIFGMTVTQPSSPTRIKQDDQEEHPLPKEVKLQKEEHNEPPAVSQDLSGSRRETVSQTAIDMLAQLFPQRKRSVLELVLKRCDLDLIRAIENVSQARKSVAEDVPSNQGFNQHTGSSLSTLPLVSSQRSSAFRPVVADQFQNKSLVELKPPTFGSSTSAAAAAICGYPKWFVPLSFPVAMGHLSNLAPRCTLPNCACLDSYQFH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00545981;
- 90% Identity
- -
- 80% Identity
- -