Basic Information

Insect: Drosophila vallismaia
Gene Symbol: -
Assembly: GCA_035047325.1
Location: JAWNPU010000073.1:22901505-22905713[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.2e-05 0.0019 18.7 0.5 1 23 162 185 162 185 0.96

2 14 0.0029 0.25 12.0 2.8 2 23 234 256 230 256 0.88

3 14 0.0033 0.29 11.9 0.6 1 23 355 378 355 378 0.93

4 14 0.35 30 5.5 5.4 3 23 428 449 426 450 0.95

5 14 0.00031 0.027 15.1 1.1 1 23 517 540 517 540 0.92

6 14 7.6 6.6e+02 1.3 0.0 2 14 559 571 558 583 0.83

7 14 0.00011 0.0098 16.5 1.4 2 23 591 613 591 613 0.97

8 14 0.00095 0.082 13.6 0.8 1 23 706 729 706 729 0.97

9 14 0.0013 0.12 13.1 0.2 1 23 760 783 760 783 0.92

10 14 0.0021 0.19 12.5 1.5 2 23 833 855 832 855 0.95

11 14 0.021 1.8 9.3 2.1 1 23 947 970 947 970 0.91

12 14 0.011 0.99 10.2 1.0 1 21 1022 1042 1022 1043 0.95

13 14 0.44 39 5.2 0.1 2 12 1080 1090 1079 1104 0.81

14 14 2.9 2.5e+02 2.6 3.2 1 20 1122 1143 1122 1146 0.64

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.2e-05	0.0019	18.7	0.5	1	23	162	185	162	185	0.96
2	14	0.0029	0.25	12.0	2.8	2	23	234	256	230	256	0.88
3	14	0.0033	0.29	11.9	0.6	1	23	355	378	355	378	0.93
4	14	0.35	30	5.5	5.4	3	23	428	449	426	450	0.95
5	14	0.00031	0.027	15.1	1.1	1	23	517	540	517	540	0.92
6	14	7.6	6.6e+02	1.3	0.0	2	14	559	571	558	583	0.83
7	14	0.00011	0.0098	16.5	1.4	2	23	591	613	591	613	0.97
8	14	0.00095	0.082	13.6	0.8	1	23	706	729	706	729	0.97
9	14	0.0013	0.12	13.1	0.2	1	23	760	783	760	783	0.92
10	14	0.0021	0.19	12.5	1.5	2	23	833	855	832	855	0.95
11	14	0.021	1.8	9.3	2.1	1	23	947	970	947	970	0.91
12	14	0.011	0.99	10.2	1.0	1	21	1022	1042	1022	1043	0.95
13	14	0.44	39	5.2	0.1	2	12	1080	1090	1079	1104	0.81
14	14	2.9	2.5e+02	2.6	3.2	1	20	1122	1143	1122	1146	0.64

Sequence Information

Coding Sequence: ATGGAAGGAATGGATCTATGGACGTCGATgttctcttcggatttcgaTGAGGGGGAAGGCGAGGCGGAGGCAGATGTTGGCCTGGATGCGGAGGTGGAGGATGGCGATGGACAGTATggcaatggaaatggaaattcgGATATTTTGGATGCCGACATGGGCGATGATGATGTCCTGGATGgtgaggaggaggacgacgatgacgatggcGAGGGGGAAAATAGGGGGAAACTCTCCggtcccgatcccgatcccgacgATGATGCcatctttgattttgaactGGAACCCATGACGAGCTTGTCGGAGCAACCGGAGCAATCGTCATCTTCGGAAGGGGCAGGACCCACATCGCGCAGGCAGTCGCTATCCAGATCCCAGGGCAGCAACCCACATCCCGGCTCTTCCCAGCGGCCAACTACCTCGCAGATCAATGCCACGGACGAGAACGGAGTTCCCATCAACTACGAGCTGGGCGTTGTCTACATTTGTCCCGCCTGCGGTGCCGAGTTCCGCCAGCAGGATCACTGGAAACGCCACATGAACCAAATGCACAAGTACAACACCCTGCGCGGGCTCAACTTCCTGCCAGTGGACAAGTTGTACCATCGCTGCCAGGAGTGCCATAAGCGGATTGCCATGCACAGCCGCGAGAATCTCCTCAAGCACAAGTTCACCCACTTGCCGTACAGGTGTACCAAGTGTTATATTTGTAAAAGGGAATACAAATACAGGCAAGATCTTATGGTGCACTTGAGACTAGTGCACTGCGAAGAGGTCGTGGCCATGATGCGGGGTGGCTACAATGCGGCGGGTCGCAAGACGCGAGTTCGAGAGTCACGCACCGAACAGATGCAGAGGGAAGGCGACTTTCCCGACGACGGAGATCGCATTGAGGTACGCAACGAGCTGCTGGAACCGGATGCGGATGAGACAAATGTGATGGAGCATTCAGCGCACTCAATTGTAGCAGAAGAAGCCCGTCCCATGGTTAAGAAAAAGCATTCTGAGGGGGAAAACGATGACGCTCTGGCTTCGGAGCTGTGCGAGGACTACATACACTTTATGTGCCCCGATTGTGGCACCGAATGCGACACCTTGAGGCAGTGGCGCCAGCACATCGAGTTTGTTCACGACTATGTCAGCCGGCGGGGACTCAACTTCCGCAGCAGTGACATGCAGATGCAGTGTCTCGAGTGTAAGAAGATTGTAACCCCAAACACCATAAAAACGTTGCGAGCCCACAAGTTTAGTCATTTATCGAATCCGGAATGGATGCACTGCAAGCTCTGCTACAAGGGCTTCACAGACCACGTCAAGGTGGTGAAACATCTGATGAAGGAGCACCACCTGGACACCCTAATGCCAGAGCGCACAGAGAATGTTTCAATAAATAGTCCCGGCGATGACGATTTCGATGAGGGGGGAAGTAAAGAAGAAGGtgctggagatggagatgcACTGGACGATGAGTCTCCATATTTTGCGGATGCACCGAGGCGCGGTGGTCGCATCAGCAGTGACGATATTTATGAGCCCTTTATAGACTATCTCTGCCCGCAGTGCGGCAAGGAGTTCCGCGAAAAGAAGCACTGGCGCACCCACGTGGTCATGATGCACGGCATGAATGATCTGTCAAAGCTGAACTTCAATGTGATAGACGAAAGGAAGCTAAAGTGCCTCGAATGCGACAAAATCATCACGAATGCCTATGGCATCCAGAATGCGCAGCAGCACAGGATTACTCATCTGCCCTTCAAGGCCTATGCCAGGTGCACAAAGTGCCAGAAGTCCTACACGGACAGAAAGGGTCTGGTGAAGCATCTGGCCACCTACCATCGCATTAATGATGTGCCACGACGATCGGGGGGAGAATCTGGCGCAGCGAGGGAACCCGTTCCGAAGCAACCTCGAAAGCAGATTGTCACCGTAGCTAATGAGACTTATGAGATAATCTACCTGGACGACCATGAGCCAGCCGTTGAAGAGGACAACGACTTTGGTGAGCAGATGCAAGGGGAAGAAGAGGATTACCTCCCGGCAACGATTGCGCCTCCCTCACCACCCATGCAGCCGCCGTCGTCGGGTCACGTCGGACAAAAGGATACACATCGCTACAAATGCGTTCATTGCGGGGATGTCTTCACCAGCCAGGTGGCCGTTAAGCAGCACATCAAAGAGAAGCACTATAAGATTCGAAAGAGATTGCGCAGTCACCAGCACACTCCGACCTCGGAGAGCTTTGCACCCTTGCCCACGGTGGAGCAGAACTACATCTTCCTGTGCCCCTCCTGCGGCATGGAGTATAAAACCCAGTTCGAGTGGCGGCGCCACATTAACGACGTCCACAATTTCGACAAGCGCCAGTATCTGAACATGCGGCAGCTGGACAAGTACCGCTATCAGTGCACCCAGTGCAAGGACATTGTGAGCAACTCGAAGCTCAAGGGCCTGCAGGACCATCACTTCCGTCACTTGCCATATCGATTGTACTTGAAGTGCCTGATCTGCGGCACTTGCTACAATCACAAGCCGAATATTGCCGCCCATTTGAGGGCCCGTCACAACATCTTTGAGAGAGGGGCGCCTGTGATGGTTACCAAACCGAGCAAGCAAATGAGCCAGCGCTATCGGGAGAATGACAGAGAAAAGACCAGAGCTCCGTCTCCAATTCCGCTGCCCGAATCTCCACCCAGTTGTTCGTCTTCTACTTCTGGAGCTGCTCTCAGTCGCACCCTGAAACCACAGCCAGGAGCGTTACCCGTTAGACCCGCCGGCTTAAACACCCTCGAGGATAGCATCTCCTATCACAATGCCGTCGACTTGGATTTCATTACCTATTTCTGCCCCAAGTGCAACCAGAACTTTGACTCGCACGCCTTTTGGCGTAAACACATTGTGGAAAAGCACAACTTTAATAGTCGCGAAGGATTGAACTTCCGGCAGCTGGATAATCATCACTACTTATGCCTGGAGTGCTACAAACGGGTGACAGTAACCCACACGAAGGGCGCCATCGGGCAGCTGCAGTCGCACAAGTTCCGCCATCTGCCTCATCGCTCCTTTAAGTGCTTGACCTGCGGCGGGGAGTTTGTGCGCAAACAAATGTTCTTTAAACATCTTAATCGGGACACCAATCGCTGTGACAATCATCCGCAGCGGGAGTTGGACGATGAAGAGCCAGAACCAGATCAAGAACGCGAAACAAAGGTGCCAATACGCTCTATGTATCAGCTATCCTGTCCGCAGTGCGGCGAAGGTTTCACCACGGTGAAGAGAGCTGGGTGGAAGGAGCACATTAATGTTTACCACAGTCTTGCCAAGCTAGATTTGCTGCACATGACCAAGATTGACGTGGATCTCTACCGCTGCAATGATTGCAACAAAGACATTCGGACCCATCGCCTCCAAGAGCTGCAGCATCACCGATTCCAGCACCTGCCCCACCCTGCCTATGTGCGCTGCAGGTTGTGTGATGACAATGAGGAATCTTCGCAATCCGGAGGCGGCCGGCTGCACAGTTTGCAACAGCTAAAGCAGCATATCCTTGATAGGCATCAAGGAGCAAAAGAAAAGGAAGCCCTGCTCGTCAAGATCCGCGACCATATGCGCAAGGATGAGCAGGAGGATGTAGTGCCAACTGGAGATGATGATTCAGGTCCATATATGCCATTGCCCCCGCACTTGTTGGATGACGGAGACGATATGGACTTCGAGGACCAATATCTGCTGGGATAG
Protein Sequence: MEGMDLWTSMFSSDFDEGEGEAEADVGLDAEVEDGDGQYGNGNGNSDILDADMGDDDVLDGEEEDDDDDGEGENRGKLSGPDPDPDDDAIFDFELEPMTSLSEQPEQSSSSEGAGPTSRRQSLSRSQGSNPHPGSSQRPTTSQINATDENGVPINYELGVVYICPACGAEFRQQDHWKRHMNQMHKYNTLRGLNFLPVDKLYHRCQECHKRIAMHSRENLLKHKFTHLPYRCTKCYICKREYKYRQDLMVHLRLVHCEEVVAMMRGGYNAAGRKTRVRESRTEQMQREGDFPDDGDRIEVRNELLEPDADETNVMEHSAHSIVAEEARPMVKKKHSEGENDDALASELCEDYIHFMCPDCGTECDTLRQWRQHIEFVHDYVSRRGLNFRSSDMQMQCLECKKIVTPNTIKTLRAHKFSHLSNPEWMHCKLCYKGFTDHVKVVKHLMKEHHLDTLMPERTENVSINSPGDDDFDEGGSKEEGAGDGDALDDESPYFADAPRRGGRISSDDIYEPFIDYLCPQCGKEFREKKHWRTHVVMMHGMNDLSKLNFNVIDERKLKCLECDKIITNAYGIQNAQQHRITHLPFKAYARCTKCQKSYTDRKGLVKHLATYHRINDVPRRSGGESGAAREPVPKQPRKQIVTVANETYEIIYLDDHEPAVEEDNDFGEQMQGEEEDYLPATIAPPSPPMQPPSSGHVGQKDTHRYKCVHCGDVFTSQVAVKQHIKEKHYKIRKRLRSHQHTPTSESFAPLPTVEQNYIFLCPSCGMEYKTQFEWRRHINDVHNFDKRQYLNMRQLDKYRYQCTQCKDIVSNSKLKGLQDHHFRHLPYRLYLKCLICGTCYNHKPNIAAHLRARHNIFERGAPVMVTKPSKQMSQRYRENDREKTRAPSPIPLPESPPSCSSSTSGAALSRTLKPQPGALPVRPAGLNTLEDSISYHNAVDLDFITYFCPKCNQNFDSHAFWRKHIVEKHNFNSREGLNFRQLDNHHYLCLECYKRVTVTHTKGAIGQLQSHKFRHLPHRSFKCLTCGGEFVRKQMFFKHLNRDTNRCDNHPQRELDDEEPEPDQERETKVPIRSMYQLSCPQCGEGFTTVKRAGWKEHINVYHSLAKLDLLHMTKIDVDLYRCNDCNKDIRTHRLQELQHHRFQHLPHPAYVRCRLCDDNEESSQSGGGRLHSLQQLKQHILDRHQGAKEKEALLVKIRDHMRKDEQEDVVPTGDDDSGPYMPLPPHLLDDGDDMDFEDQYLLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00615746;
90% Identity: iTF_00504279;
80% Identity: -