Basic Information

Insect: Drosophila vallismaia
Gene Symbol: pita
Assembly: GCA_035047325.1
Location: JAWNPU010000066.1:17163588-17165572[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00062 0.054 14.1 0.1 1 23 234 256 234 256 0.96

2 10 5e-06 0.00043 20.7 0.8 1 23 262 284 262 284 0.96

3 10 1.7e-06 0.00015 22.2 3.0 1 23 290 312 290 312 0.99

4 10 0.00073 0.063 13.9 0.3 1 23 318 340 318 340 0.97

5 10 3.3e-05 0.0029 18.1 0.1 1 23 346 368 346 368 0.94

6 10 0.0001 0.009 16.6 1.4 1 23 374 396 374 396 0.94

7 10 0.00048 0.041 14.5 5.0 1 23 402 424 402 424 0.99

8 10 4.1 3.5e+02 2.1 1.5 1 23 433 455 433 455 0.92

9 10 0.3 26 5.7 0.0 2 23 461 482 460 482 0.96

10 10 0.21 18 6.2 0.4 1 23 488 511 488 511 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00062	0.054	14.1	0.1	1	23	234	256	234	256	0.96
2	10	5e-06	0.00043	20.7	0.8	1	23	262	284	262	284	0.96
3	10	1.7e-06	0.00015	22.2	3.0	1	23	290	312	290	312	0.99
4	10	0.00073	0.063	13.9	0.3	1	23	318	340	318	340	0.97
5	10	3.3e-05	0.0029	18.1	0.1	1	23	346	368	346	368	0.94
6	10	0.0001	0.009	16.6	1.4	1	23	374	396	374	396	0.94
7	10	0.00048	0.041	14.5	5.0	1	23	402	424	402	424	0.99
8	10	4.1	3.5e+02	2.1	1.5	1	23	433	455	433	455	0.92
9	10	0.3	26	5.7	0.0	2	23	461	482	460	482	0.96
10	10	0.21	18	6.2	0.4	1	23	488	511	488	511	0.91

Sequence Information

Coding Sequence: ATGCCTGGATACATCTGCCTGGACTGCCGGCTCCTGTTCGAGCATTGCTACCGTTTCAAGCAAATGTGCAAGAGGGCGGACACTTTGCTCCGCCAGTTTCCCTTGACCGGAACTTGGCCTGCACCGCTTGAGAAACCGCGAGCTCCAATGGTTTCCGGCCAAGCTGTGGCCATAACGATCAATAAGAAGGAGCCGCCAGTGTCTATTTCCCCTGAATTGAAACCGAAAATATTACTCAATACCATGGCCAATACCAAGGCAAACAACAAGGTGGTCATCGAGAATGTCGAGATTTTGGAGACGAATTTGCTCAACAAAAATCTACCTTCCAAGGCGGTCTTAAGCACTACGATTCGTTCGCAGCCCTATCAGTTAAAGGTGGATAATAACCAGGAGCTGTCCATGGATGATGTGCAAAATATGCTGGAGGATATGGCCAATGAACTAGATGAGATACCTCCGCCACAGAAAGAGGTTTTCCCACAACAATCCCCGAACAAGCCCaaggttttaaataaatcttcGATCAGGATACTGAATAAGGGACCCGCGGCTCCGCTCGAACCGCGCATAGCCACGCCGCAAATAAAGCGGGACGAGAGCGGAAATGTGGCCATTGTTACGGAGATCCTGGACCCCAATACTCTGGTGGTTCAAGAGGATCTGGTTAAAAATGCAGAGCAAGTTCCAACCAATGTCTTTCCTTGCCCGGACTGTGAACGATCCTTTCCGCTGCAGCAGCTGCTCGACATTCATCGCTTAAACCATACACGAAAGCGAAGCTTCCAGTGTCCCGACTGCGACAAGAGCTTCTTTTCAAAGTACGATATGGCCAAGCACGCCTTTATCCACACAGGCGAGCGGCCGTTCAAGTGCAGTGTTTGTGAGAAGGGTTTCACCCGAAAGGCATTGCTCCACCGGCACGAGCGCACTCACACGGACATTCCCAAGTTTATCTGCGTGTACTGTGAACGTCCATTTATTTCGCGCCAGGAGATGGAGAAGCACGCTCAACGACATACCAAAAAACGGCCCTTCCCTTGCGGTGTCTGCGGCAAGTCATTTGCTTTCAAACAGGGTCTGGAGCGTCATGAGGTAATCCACCAATCAAACCTTCCCTTCCCTTGCCAGCACTGCCCCAGATCCTTCCCTACGGCTTGTAAACTGGCACGTCATTTGGTGGCTCACGCCGGCAAGAGGGTCTATCCCTGCAAATATTGTCCCAAGTCGTATTTGTTGTCTCACCATCTGTCCCGGCACTTGCGAACCCACAAGCAGGCCACCGACGATTCCTCATTCACGTGCAGTGAGTGCAGGGACACGCATACTAGCTATGACAGCTTGATTGAGCACTCTCAGATCCATGCATCTATGTCGCTCAAGTGTCCACTCTGCCGCGAGGAGATCGGGGACGCCGATGGCGTTGAAACCCATATGCAGCTGCACAGGGAAAGCGAGAGATTTGCTTGCGAGTTCTGCGACCACATCTTCTTGAGCCAGGCACAGGCGCAGAAGCACATTGAGGACGACCATGTGGTGGAAATGGTTCCTTACAACAATGAAGATGAGGGTGAAGGCGATAACGAAGGTGAAGGTGAAGGCGAAGTCGATAGCGAGAGCGATGCCGAAAAGGATTTGAAGGAGGAGGCAACGGAAGACCCtaaagaaattgaaataaagGAAGAATTCTTGGAGGAATTCTTGGACGATAAAGACGATTCGGATTCTTCCTTTAGCCCGACTCCCGTGAAACGTCGTAAAACCAGTCCAGCTAAAGGAAAATCAATTGAAGCTCCCAAAGGAGAGAAGCGACAGACTCGGAGTCAGGACCGTGGCAAGGTAAACAAGGCTGCTCCAAAGAAAGATGTCGCGGTTGCAGCCAAGCAGGGTAGATTGTTGGGTAAACAGGGAAAATGGCATAAGATTTAA
Protein Sequence: MPGYICLDCRLLFEHCYRFKQMCKRADTLLRQFPLTGTWPAPLEKPRAPMVSGQAVAITINKKEPPVSISPELKPKILLNTMANTKANNKVVIENVEILETNLLNKNLPSKAVLSTTIRSQPYQLKVDNNQELSMDDVQNMLEDMANELDEIPPPQKEVFPQQSPNKPKVLNKSSIRILNKGPAAPLEPRIATPQIKRDESGNVAIVTEILDPNTLVVQEDLVKNAEQVPTNVFPCPDCERSFPLQQLLDIHRLNHTRKRSFQCPDCDKSFFSKYDMAKHAFIHTGERPFKCSVCEKGFTRKALLHRHERTHTDIPKFICVYCERPFISRQEMEKHAQRHTKKRPFPCGVCGKSFAFKQGLERHEVIHQSNLPFPCQHCPRSFPTACKLARHLVAHAGKRVYPCKYCPKSYLLSHHLSRHLRTHKQATDDSSFTCSECRDTHTSYDSLIEHSQIHASMSLKCPLCREEIGDADGVETHMQLHRESERFACEFCDHIFLSQAQAQKHIEDDHVVEMVPYNNEDEGEGDNEGEGEGEVDSESDAEKDLKEEATEDPKEIEIKEEFLEEFLDDKDDSDSSFSPTPVKRRKTSPAKGKSIEAPKGEKRQTRSQDRGKVNKAAPKKDVAVAAKQGRLLGKQGKWHKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00477528;
90% Identity: iTF_00504174;
80% Identity: -