Basic Information

Gene Symbol
Arid2
Assembly
GCA_035047325.1
Location
JAWNPU010000066.1:3245526-3251116[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-25 1.2e-21 77.0 0.1 2 89 69 155 68 155 0.93

Sequence Information

Coding Sequence
ATGAGCGCCTCAACCATAGACAGCGTGCGGGTGCTGCTGCAGTCGCTTCCCGCAGCTGCCATCAACAACGCTGGCGCCCAGCCGGCAGAAATGCAGATGCCGGGCAAGGGCATATCGATGATGGCGTCAGTCGGTACTCCACTGCGCGCCAGAAATCAGCTGCCTGCTATGCCGGAGAAGATCGAGGAAACGCCGGTCTCGGCACCCGAGGAGTTCTGGCGGGACCTGCACCAGTTCCACGAGCGACGCGGCACGCCCATGACCCAGACGGCCAAGATTAGTGGAAAGCAGGTGGACTTGTACAAGCTGTACCAAGAGGTGACCGAGCGCGGCGGTTTCAACAAGGTGAACCTGCGGGACGAGTGGGATGAAGTGTACAGTGCGCTGGAGACGTTGCGGGAGCGCTGTGTGAACGGGACCGCCGGCATCAAGCACATCTACCGGCGCTACCTAGACAAGTACGAGCGCCTCAACTTCTTTGGGGAGGACCCGGACAAGATGGAGGCCCTGGAGGCGGCCATTGAGAATGCTGAGCTGGGCGGAGGGCGCGCTCGTTCACGGGCTCTGGCCGGAGGAAGTGGAGTCGGTGGCTTGAGCAGCATGTTTGGTCTGGCGCACTCCACGCTTCCGGCAGTGCCAATGTCGTACAATCAGCGGCAGCATTCGGTGAATACGGAGCGACGGCGGCAGTACAAGCTATCCACCCAGCTGCACCGGCACAGCAGCTACGAGAAGCTCCTGCTCTCGCTGCTTTCGCCGCTGCCCAACGAACAGGACTTCGCCATCAACGTCTGCACCCTGATGGCCAACGAGGTGCGGCACACCTTGCAGCTCTCCGAGTGCCCCAAGCTGCTGGACGTGCTCCTGGCCCACCTGGGCGTGTACGCAGACTTTACCATACGACAGCTCTTCCAGCACAGCTATGCGGAGGTGCGGCAGCATTCACAGTTGAGTTTCTGGCGAGATCTCCTGCACGACAGGCCCCAGATTCTGGAGCTGTACACTGACGAACAGGCCTGGCTGGACAACGGTCTCATCACCAAGGAGGACAGCGAGAACTCTGCCGCTCGCAGTGAGCTGTTGGCGGCCTGTGACGAACTGGACTTCCTCAATCTGCGGCGTAGCAACGGCACTGACGAGCGGATGGGCCAGCGCGTGCTGCAGATTGTCCAGCTCATTCGAACGCTTAGTTTCCACCAGGAAAACCACGCCATCCTGTCACACAACCGTACCCTGTGGCGGTACCTGGTCATGGGTGCCAATGTTCGGTGGAGTAATATTCACATCCAGGCTTTGGAAACTGCTGGTAATCTGGCACACCAGTTTGAGCTGCAGGACCCGGCCACAGACGAGCTTTCGCGGAATCTTCTGGCTACGCTCTGCGAGGGCGTTGACTCGAACGACCGTGCTGTGGTCATCTGTTGCCTTGAGATCCTTTACAAGCTGTGTGGCCGGGAGGGCAACTCGCAGCACATCAACCGGTGCCTAGGTCTGGACTTTTACCAACGTGCCATGCTCCTGCTCTCGCTGACGGATGTGATGCTGCTGATCTTTACCCTCGAGGCGGTTTACGCTCTCAGCTCGCTGGGAGCCCGCCCCTGTTCGATGCTGATGCAGGTGCGCGGTCTGGTAGACCAATTGGTGGCGCTCATAACTGTGGAAGCGCAGACATACGGAGCCGATGGATGCATTCTCATGCGCGTGGTAGAGGTGGTGCCGGGCAACATGATCGCTTCGATGTCTCAAAACGCCCCTCCGCTGCAGACACCCGCTGCGGGggccgctgctgttgctctCACGTCGCTTCCCTCTTCTCTGCAGGTTGCTGTTAAGCCGCCCGTGGCTCTTCCTACTCCCACGCCCGCCCAGACTCAGGTACTTCTGCCCTTCGGGGAGCAGCAGACCATCTCCAGCACGGCGCCTGCTCTGACTGTCGCTGTGGTCCCGTCTCTTCCGACTGTACCAGTGCCCAGCCTGCCGCAGGTGCCTCTACCAGTTCCCAGCCTGCCACAGGTGCAACTGCCTCCCATTACCACGACTGTAGCGCTCCCAATTCCGCCCTCCGCCCCTCAGAGCTTCACCCATGAAGACGAACAGTACGCCCTGGCCTGGCTGGGAGCCACCTACGAGAGAGCAGGTGTTGGCAACGAGTTGCGCGTCGAGCAGTCGGAGCTCTACCGGATCTATCTGTCCCACTGCCAGAAGTCTGGGAAACAGTCTGTCGTCAACCACAAACAGTTCCCGCGCCTTGTCCGGTTGCTGTTCAACCAAACGGTGGGTCCGGTTATTGTGCGTCAGTTGGATGGAACGGAGCTGCCGGGAACCTACTACGTGGGAATTCGGATGCGCGCCCAGCCACTGACTGTACAACAAAAACCTCTCCCCAACATGGTGCCTGTCAAGAAGGAGACTCCGATTCTGCCGAAACCAGCATCCAACGAACACACAGACGTTGCGTCCGAGGAAACTCCTGCTAATCCCACTGCCTCCACGCCGCCACCGAGCTCCTCGCTGATAAAAAGTCTGCTGGCCAACAAGGTTACCGAAAGGCAACAGGCCCAAGCGAAGCAGAAGGCCCAGGGCCAACAGCCGCCTGCTTTGGTGGCCACTACGGCCTCGGTCACGGCTGGGACTCAACCCATTAAGGTCACCTCCACGGCCATCAGCGCCTTTGTGAACAATCCGCTGATGCAGCACACGCCGGTGAAGGTGGGGCAGACAACCATTAAGCCGTTGCACCCGCAGCTGACCATTGAGAAGAAGCCGATCACCGACTCTGCGCCACCGCCCCTTGCACCACTGAGTGGGGCCAATGTCGTGACCAAGGACACCACCGGGCGCAACCTGATAATAGCTGCAGCCGCAGCCAAACGGAAGCTTACCATAGACGAGGAGCAAAGCAAGCGAATTGCTCTGGATGCATCCTCTGCAGGCTCAAAGGAGGAACCCCACGTAACGCCCTCAAAGAATGCGGCCAATCTCTATGCGGACCTGGCAGCTTCCATACTGGAGGACGAGGACTTGGATGACGTGCCGCCGTTGGCAAAGACCAGCCAGGACCATCCGCCgcagcagtcgcagcagcaacaacagctccAGCTCATTCCAGCCAAAGTGCAGTCGACCCAGCGGCAGTTGTTGTTCCCCGCCAGCAGCGTGGCCTCCCCAGCTCCGCCCCCGCAACTCAAGCTGGCCACCACGGCCACAATTAAAACGGACCAAGGCCTCCAAACAGTGCCTGTTATCATACAGTCCAAGACATCATTGGACTCTGCTCCGGCGCCCCAGACCCAGTATGTACTGGCCACCAACCAGCAGGGCCAGACCTACTTGGTGGCGCAACAAACTCAGCCGGCGATCCCGCCACCCAATCAGGGAAACACTCCAACCTTGCTGGTGACCCAGGCACCGCAGCAACAAACCAAGACCATTATTATTCTCCAGCAGCCGAGTGGAGCGGCTGGAGCCAACGTGGCGGGCACGCAGAAGATGTTCATGACCACGCCGCAGGGCCAGCAGGTTCTGGTCACCACTACGACAGGCCCACCGTCGGCACAGACGCGCGTTGGAGCTCCTCAGCAGCAAATATTCATAGCCCCCCAGCGTCCCGTTCCACCATTGGGAGCTGGCCAAATGTCACCCTCTTTGTTATCCCAACTAAATCAGATACCGGCCACCATCAAGCTTCACCAGCCGCAACCACAGCCGCAGTTGGTGGCGTCGCAGGGGTTGCCGCAACAACGCCTTGTGGCCGCCAAACCCGGTGCATCCCTTCCCATTCCTCAGTTGCAGCAACACCAGTCCATAATCCAACAGCACATAATCTCAGGACCTGCCACGGCAACgcccactgctgctgctggtggggCGGCCGTGGCGGAGAAACGCCAGATGCTTCTCGGGGGCATCAAGGAGACGACGCTCATCACCCAGACCACGGCCATAGCGGCACCGCTGCAGCAGAGCCAGCTTAATTCCCAGACGATCATAACTTCTCAGCCGGCTGCCACCACCGCCGGCACTGTAGCTcttcagcaacagcagcagcagcacatcCGCACCGTTCtggagcaacagcagcatcatCCCTCCATTATCCAGCAGAAGATTACAATTCCAGCTATCTCGGAACCTCAGAAACCTAAGCTGGCGACTGTATCAATTCCTGCGACTCCACCAGGAACCTCAATAGTGGCAAAGAAACCCTTGCCGCCTCAGGCGACCCCGCAAAAGGTTGCCACCACCCAGGGCGTTGTTGTCTCGCAAGCAGCCGCCGCCGAAGCCACTCTAGGAGTCGGGACGAGAGTGATTGCGGCAGCCACAAGCGAAACCAAGCCCACGGATCAACTTGCGCCAGTAACTGCAACGGTGGTTaccagcagcagtagcagcgcCGTGGTGGTCAGCCAGAGCGTGTACGCCACACCTCCCACCAGTAACAGTCCCACGCCAGCTCCCTCCGCTGTGCCAGTGGATGCCAACTGGCTGTATATCTGCGACTGGCGCAACTGCCCGCGCAAGAAGTTCAAGTCGCTCAACGACCTCAAGTACCACGTCTGCAACGTGCACTGCCCCGACCACCTGGACTCGGACGCAGACATATACTGTCAGTGGGGCAGTGGACCCACCTTTTGCGACAACAGGGCGCGCAAACGCTACTCGCTGATGACCCACCTGATTGACCGCCACTTGACGACGGAGAATCTCCGAGCGGCTATGCAGCGCCGCCTGGCCACTGGCATACACAATGTGGCGCCCACACAGCCTCCAGTGACCATAGTCCGCAATGAAGGACCCGGCCCAAAGCAGACGGGTAGTGGGTCCGGCCCATCGTCGGTATCCTCACCAGCTCCGACAGCGGCCACCGTTGGCAGCGCCGCCATGCAGGCTATGAACAGACACACCACGGACTACACAAACTCCAAGGAGCTGATGGACGAAAACGAGGGGCCGGTCACTAAGAGTATACGTCTCACGGCGGCGCTCATCCTTCGGAACCTGGTCACCTACTCGTCGACGGCCAAGCGCTGCTTAAAGCGGTACGAGCCCCACCTGGCCAACGTGGCCTTAAGTAATGTGGAAGCCAGCGGAGTACTCTCCCACATCATGTACGAGCTAAGCCAGTAG
Protein Sequence
MSASTIDSVRVLLQSLPAAAINNAGAQPAEMQMPGKGISMMASVGTPLRARNQLPAMPEKIEETPVSAPEEFWRDLHQFHERRGTPMTQTAKISGKQVDLYKLYQEVTERGGFNKVNLRDEWDEVYSALETLRERCVNGTAGIKHIYRRYLDKYERLNFFGEDPDKMEALEAAIENAELGGGRARSRALAGGSGVGGLSSMFGLAHSTLPAVPMSYNQRQHSVNTERRRQYKLSTQLHRHSSYEKLLLSLLSPLPNEQDFAINVCTLMANEVRHTLQLSECPKLLDVLLAHLGVYADFTIRQLFQHSYAEVRQHSQLSFWRDLLHDRPQILELYTDEQAWLDNGLITKEDSENSAARSELLAACDELDFLNLRRSNGTDERMGQRVLQIVQLIRTLSFHQENHAILSHNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELQDPATDELSRNLLATLCEGVDSNDRAVVICCLEILYKLCGREGNSQHINRCLGLDFYQRAMLLLSLTDVMLLIFTLEAVYALSSLGARPCSMLMQVRGLVDQLVALITVEAQTYGADGCILMRVVEVVPGNMIASMSQNAPPLQTPAAGAAAVALTSLPSSLQVAVKPPVALPTPTPAQTQVLLPFGEQQTISSTAPALTVAVVPSLPTVPVPSLPQVPLPVPSLPQVQLPPITTTVALPIPPSAPQSFTHEDEQYALAWLGATYERAGVGNELRVEQSELYRIYLSHCQKSGKQSVVNHKQFPRLVRLLFNQTVGPVIVRQLDGTELPGTYYVGIRMRAQPLTVQQKPLPNMVPVKKETPILPKPASNEHTDVASEETPANPTASTPPPSSSLIKSLLANKVTERQQAQAKQKAQGQQPPALVATTASVTAGTQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLTIEKKPITDSAPPPLAPLSGANVVTKDTTGRNLIIAAAAAKRKLTIDEEQSKRIALDASSAGSKEEPHVTPSKNAANLYADLAASILEDEDLDDVPPLAKTSQDHPPQQSQQQQQLQLIPAKVQSTQRQLLFPASSVASPAPPPQLKLATTATIKTDQGLQTVPVIIQSKTSLDSAPAPQTQYVLATNQQGQTYLVAQQTQPAIPPPNQGNTPTLLVTQAPQQQTKTIIILQQPSGAAGANVAGTQKMFMTTPQGQQVLVTTTTGPPSAQTRVGAPQQQIFIAPQRPVPPLGAGQMSPSLLSQLNQIPATIKLHQPQPQPQLVASQGLPQQRLVAAKPGASLPIPQLQQHQSIIQQHIISGPATATPTAAAGGAAVAEKRQMLLGGIKETTLITQTTAIAAPLQQSQLNSQTIITSQPAATTAGTVALQQQQQQHIRTVLEQQQHHPSIIQQKITIPAISEPQKPKLATVSIPATPPGTSIVAKKPLPPQATPQKVATTQGVVVSQAAAAEATLGVGTRVIAAATSETKPTDQLAPVTATVVTSSSSSAVVVSQSVYATPPTSNSPTPAPSAVPVDANWLYICDWRNCPRKKFKSLNDLKYHVCNVHCPDHLDSDADIYCQWGSGPTFCDNRARKRYSLMTHLIDRHLTTENLRAAMQRRLATGIHNVAPTQPPVTIVRNEGPGPKQTGSGSGPSSVSSPAPTAATVGSAAMQAMNRHTTDYTNSKELMDENEGPVTKSIRLTAALILRNLVTYSSTAKRCLKRYEPHLANVALSNVEASGVLSHIMYELSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00482767;
90% Identity
iTF_00503781;
80% Identity
-