Basic Information

Gene Symbol
ARID2
Assembly
GCA_008042615.1
Location
VNJW01009680.1:4394-10974[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-25 1.6e-21 76.7 0.0 2 89 77 163 76 163 0.93

Sequence Information

Coding Sequence
ATGAGCGCCTCCACCATCGACAGCGTGCGGGTGTTGCTGCAGTCGCTGCCCGCTGCCTCAAATAACAATACTGTCGTCGGTCTTACAGGCGAACAGCAGACGCCGGCCAAGGGCCTGGCAATGGTTTTGCCCGCAACTACACCACTGCGCGCCAGAAACCTAAGCCAGCAGTTCCAGCCACAAGTGCCGTTTACTCCGGAAAAGGCTGAAGAGAAGCCTACGTCGGCTCCCGAGGAGTTCTGGCGAGATCTGCAGCAGTTTCACGAACGACGCGGCACCCCACTGACCCAGGCGGCCAAGATCAGTGGAAAGATTGTGGACCTGTACAAGCTGTACAATGAGGTCACCGAGCGCGGTGGCTTCAACAAAGTGAACATGCGAGACGAGTGGGACGAGGTCTACAGTGCCCTGGAGACTCTGCGGGAGCGCTGCGTCAATGGCACGGCGGGCATCAAACACATATATAGACGCTATCTGGATAAGTACGAGCGCCTGAATTTCTTTGGAGAAGATCCAGACAAGATGGAAGCCTTGGAGGCGGCCATTGAGAACGCGGAAATGGGGGGTGGTCGCTCCCGATCACGGGCCTTGGGTGGCgggggcggaggcggcggcagcggtggtCTTGGCAGCATCTTTGGTTCGATGCACTCGACGCTGCCGGCGGTGCCCATGGCCTATAACCAGCGGCAGCATTCAGTAAGCGTGGACCGTCGTCGGCAATACAAGATGTCCACACAGCTTCACCGGCACAGCAGCTACGAGAAGCTGCTTTTATCCCTGCTGTCGCCGCTGCCCAACGAACAGGACTTTGCCATAAACGTGTGCACCCTTATGGCCAACGAGGTGCGCCACACGCTCCAGTTGTCCGAGTGTCCCAAGCTGCTGGATGTGCTGTTGGCCCACCTGGGCGTCTATGCCGATTTCACCATGCGCCAGCTGTTCCAGCACAGCTATGCCGAGGTGCGACACCACTCTCAGCTTAGCTTTTGGCGCGACCTGCTTCACGACAGACCCCAGATCCTCGAGCTATACACGGACGAGCAGGCCTGGCTGGACAACGGTCTGATCAGCAAGGAGGACGGGGAAAACACGGCCGCTCGCAGTGAGCTGCTGGCGGCCTGCGATGAGTTAGATTTCCTTAATCTACGTCGAAGCAACGGCACCGATGAGCGGATGGGCCAGCGCGTCCTTCAGATTGTCCAGCTTGTGCGGGCCCTCAGCTTCCATCAGGAGAATCACACACTTCTCGCATCAAATCGCACATTGTGGCGATATTTGGTCATGGGCGCCAACGTGCGATGGAGCAACATTCACATTCAAGCTCTGGAGACGGCCGGCAACCTTGCTCACCAGTTTGAGCTGCAGGATCCCACGACGGACGAGCTGTCACGCAATCTCCTGGCTACTCTTTGCGAGGGCGTCGACTCCAACGATCGGGCGGTGATTATCAGCTGCCTGGAGATACTGTACAAGCTGTGTGGTCGCGAGGGAAACTCGCAGCACATTAATCGCTGCCTTGGCCTGGACTTCTACCAGCGCGCCATGCTGCTGCTCTCCCTGACGGACGTGATGCTCCTCATCTTTACTCTGGAGGCAGTGTACGCGCTCAGTTCCCTTGGAGCGCGGCCGTGTTCGATGCTAATGCAGGTGCGAGGTCTGCTAGATCAGCTGGTGGCCCTGATCACTGTGGAGGCGCAGACCTACGGCGCGGACGGTTGCATTCTCATGCGGGTGGTGGAGGTGGTGCCGGGCAATATGATAGCCTCACTGGCCCAGAACAATATGCCGGCCATGCAGGCTAATACCGTGACTTCTGCTGCATCCCTCACGACGCTGCCACCATCGCTGCAGGTGGCCATTAAGCCGCCAGTTGCCTTACCCACACCAACAGCCGCCCAGACTCAGGTACTCTTGCCCCAGGGAGGGGAGCAAACAGTGCCTGCTCCGACGTTGCCATCGCTTCCATCGATCCCCAGTCTTCCGATGCCTAGTCTGCCCCAGGTTCAGCTGCCAGTGCCCAGCCTTCCGCAGGTCCAATTGCCTCCAATTCCGGCCACCGTGGCCTTGCCCACTCTGCCATCGGCAGGCCCGAGCTTCACCCACGAGGACGAACAGTACGCCTTGGCCTGGCTAGGAGCAACCTACGAGCGGGGAGCAGGCATGGGTCACGAGCTGCGCGTGGAGCAGGCAGAGCTGTACAGAATCTACCTGTCGCACTGCCAAAAGGTGGGCAAGCTCTCAGTGGTGAATCACATGCAGTTTCCCCGTCTGGTGCGGCTCATCTTCAATCAGACTGTTGGACCGGTGATCGTGCGGCAGCTGGACGGTACTGAGCTGCCCGGTACCTACTACGTTGGCATCCGTATGAGGGCTCAGCCGCTGATCATGCAGCAGAAGCCGCCTGTTCCCAAGAAGGAGACCCCGATCCTGCCCAAGCCGCCATCAAGTGATCCCACTGCGGCGGAGGTGTCGTCTGAGGAAACATCAACCACGGGTCAACTTCCTCCTTCAGCTAGCACGCCAGCTCCGAGTTCCTCGCTGATCAAGAGTCTCCTGGCCAACAAGGTCACCGAGCGCCAGCAGAAGCAAAAGGCGCAGGCTCAGTCGCCGCAGCCGCCAGCCCTAGTGGCCACCACGGCACCTTCGCCAACAAATTCCAGCAGCCAACCCATCAAGGTCACCTCGACGGCCATTAGTGCCTTTGTGAACAACCCACTCATGCAGCACACTCCAGTAAAAGTGGGACAGACTACAATTAAGCCGTTGCATCCCCAGATGACGATGGAACAAAAGAAGCCTATTACGGACTCGGCTCCGCCGCCCCTAGCTCCACTGAGTGGAGCGAACGTGGTGAGCAAGGATGCCAGCGGGCGCACCCTAATTATTGCggcagctgcggcggctgccaAACGCAAGTTAACCATCGACGAGGAGCAGAACAAGCGTCTGGCTTTGGACGCcggcgccagcagcagctgtagcTCCAGTTCTTCCGCCAGCAAGGATGAGCCGCAGGTTACACCCTCGAAGAATGCGGCCAATCTGTATGCGGATTTGGCGGCCTCCATACTCGAAGACGAGGACTTGGACGACGTGCCACCGCTGACAAAGCCCAGTCAGGAGCAATCCCAGCAATCGtcgcaccagcaacagcaacagctccAGCTGATTCCGGCGAAAGTGCAGCCGACCCAGCGTCAGCTGGTATTCCCCTCCGGCAGCAGTGTTGCTTCTCCTGCCCCACCGCCGCAACTGAAACTGGCCACTACGGCCACCATCAAGACGGATCAGGGCCTTCAGACCGTTCCAGTGATCCTGCAGCCAAAGAGCACGATGGAGCATGTCACTCCAGCGCCGCAGACGCAATACGTTCTCGCCACCAATCAGCAGGGCCAAACCTATTTGGTGGCCCAGCAAACTCAGCCGGCAATTCAGCCGCCCAACCAGTCAGCTCCTCCCACGCTGCTGGTTACGCAAACCCCGCAGCAGCAGACCAAAACGATTATTATCCTTCAGCAGCCAGGAGGAGGCGTGTCTGCTGCCAATGTAGCGGGCACGCAAAAGATGATTATGACAACGGCGCAGGGGCAGCAGGTCCTggtcaccaccaccaccgctcCGCAGTCGGCTCCACGTAACGTgacgccgcagcagcagcagatcttTATAGCACCCCAGCGTCCCGTTCCCGCCTTGGGTGCTGCCGGGCAAATGTCGCCCTCACTTCTGTCGCAGCTCAATCAAATCCCGGCCACCATAAAGCTGCACCAGCCGCAACCACAGCCGCCGCAGCGTTTGGTGGCCACTAAAACGGGCGCTGCTATGCCTATTCCCCAGCTGCAGCAACACCAGTCCATTATCCAGCAACACATCATCTCCGGCCCCTCCACACCGGcctcggcctcctcctcagcTGTCGAAAAGAGGCAGCTTCTTCTGGGCGGTGGCCTGAAGGAGACCACTCTCATCACCCAGACCCCAGCCACAGCGGCTCCACTACAACAGAGCCAGCTAAACTCGCAGACGATCATCACCACACAGCCGCCGGCGCCCATCACCACCACAGCAGCTACTGTTGGAGGCCTGGCCCttcaacagcaacagcagcagcacattcGATCCGTTTTGttggagcaacagcagcagcagcaccatccATCTATCATTCAGCAAAAGATCACAATGCCGACCATCTCAGAGGCGACGAAACCAAAGGCTGCTACCACCGTTACAGCGCCGGGTACGCTGCCAGGCACCTCCCCTCTCTTGGCCAAGAAGGCATTGCAAACGCCAATGAAGCCAACCCAGACTGTTGTGGTAACAACGGCGACTACCAGCGGCGAATCGATGTCGGTGGCAGGCGGCAAATCAGTtgtgacaacaacaacaacctgcGAGGCCAGAATAGCAGACCAGCCGCCAGTTACTTCGAGTGGCGCGGTCTCAACCGCTCCgactagcagcagcagcgctgtggTTGTCAGTCAGAGCGTCTACGCTGCGTCACCTACTTCGAGTGGCAGTCCCACCACGCCTGCCGCAGTGCCCGTGGACGTCAACTGGTTGTACATCTGCGATTGGCGCAACTGTCCGCGCAAGAAGTTCAAGTCCTTGAACGAGCTCAAGTACCACGTGTGCAACGTACACTGTCCGGACCATCTGGACTCAGATGCCGACATCTATTGCCAGTGGGGTAGTGGGCCCACATTCTGCGACAATAGAGCCCGGAAGCGGTATTCCCTGATGACGCACTTGATTGACCGGCACTTGACGACGGAGAATCTGCGTGCCGGAGTGCAACGACGTCTTACCACCGGAATTCATAATGTGGCACCCACTCAGCCGCCCGTGACCATAGTGCGGAACGAGGGCCATGTCCAGCGAGCGCCGCCGGGAAGCGGCTTAGGTGCGCCAGCAACGGTCCCCGCAACCTCCACTGCGGCTCCAGTTGTGGGCAGCGCCGCGATGCAGGCCATGAACCGACACACCACCGATTATACGAACTCCAAGGAGCTGATGGATGAGAACGAGGGGCCCGTCACCAAGAGCATCCGACTGACAGCGGCACTAATTCTGCGCAATTTGGTCACTTACTCGTCAACGGCCAAGCGGAGCCTAAAGCGCTATGAGCCCCACTTGGCCAATATAGCACTGAGCAACGTGGAGGCCAGCGGAGTGCTCTCACACATTATGTACGAGTTGAGTCAGTAg
Protein Sequence
MSASTIDSVRVLLQSLPAASNNNTVVGLTGEQQTPAKGLAMVLPATTPLRARNLSQQFQPQVPFTPEKAEEKPTSAPEEFWRDLQQFHERRGTPLTQAAKISGKIVDLYKLYNEVTERGGFNKVNMRDEWDEVYSALETLRERCVNGTAGIKHIYRRYLDKYERLNFFGEDPDKMEALEAAIENAEMGGGRSRSRALGGGGGGGGSGGLGSIFGSMHSTLPAVPMAYNQRQHSVSVDRRRQYKMSTQLHRHSSYEKLLLSLLSPLPNEQDFAINVCTLMANEVRHTLQLSECPKLLDVLLAHLGVYADFTMRQLFQHSYAEVRHHSQLSFWRDLLHDRPQILELYTDEQAWLDNGLISKEDGENTAARSELLAACDELDFLNLRRSNGTDERMGQRVLQIVQLVRALSFHQENHTLLASNRTLWRYLVMGANVRWSNIHIQALETAGNLAHQFELQDPTTDELSRNLLATLCEGVDSNDRAVIISCLEILYKLCGREGNSQHINRCLGLDFYQRAMLLLSLTDVMLLIFTLEAVYALSSLGARPCSMLMQVRGLLDQLVALITVEAQTYGADGCILMRVVEVVPGNMIASLAQNNMPAMQANTVTSAASLTTLPPSLQVAIKPPVALPTPTAAQTQVLLPQGGEQTVPAPTLPSLPSIPSLPMPSLPQVQLPVPSLPQVQLPPIPATVALPTLPSAGPSFTHEDEQYALAWLGATYERGAGMGHELRVEQAELYRIYLSHCQKVGKLSVVNHMQFPRLVRLIFNQTVGPVIVRQLDGTELPGTYYVGIRMRAQPLIMQQKPPVPKKETPILPKPPSSDPTAAEVSSEETSTTGQLPPSASTPAPSSSLIKSLLANKVTERQQKQKAQAQSPQPPALVATTAPSPTNSSSQPIKVTSTAISAFVNNPLMQHTPVKVGQTTIKPLHPQMTMEQKKPITDSAPPPLAPLSGANVVSKDASGRTLIIAAAAAAAKRKLTIDEEQNKRLALDAGASSSCSSSSSASKDEPQVTPSKNAANLYADLAASILEDEDLDDVPPLTKPSQEQSQQSSHQQQQQLQLIPAKVQPTQRQLVFPSGSSVASPAPPPQLKLATTATIKTDQGLQTVPVILQPKSTMEHVTPAPQTQYVLATNQQGQTYLVAQQTQPAIQPPNQSAPPTLLVTQTPQQQTKTIIILQQPGGGVSAANVAGTQKMIMTTAQGQQVLVTTTTAPQSAPRNVTPQQQQIFIAPQRPVPALGAAGQMSPSLLSQLNQIPATIKLHQPQPQPPQRLVATKTGAAMPIPQLQQHQSIIQQHIISGPSTPASASSSAVEKRQLLLGGGLKETTLITQTPATAAPLQQSQLNSQTIITTQPPAPITTTAATVGGLALQQQQQQHIRSVLLEQQQQQHHPSIIQQKITMPTISEATKPKAATTVTAPGTLPGTSPLLAKKALQTPMKPTQTVVVTTATTSGESMSVAGGKSVVTTTTTCEARIADQPPVTSSGAVSTAPTSSSSAVVVSQSVYAASPTSSGSPTTPAAVPVDVNWLYICDWRNCPRKKFKSLNELKYHVCNVHCPDHLDSDADIYCQWGSGPTFCDNRARKRYSLMTHLIDRHLTTENLRAGVQRRLTTGIHNVAPTQPPVTIVRNEGHVQRAPPGSGLGAPATVPATSTAAPVVGSAAMQAMNRHTTDYTNSKELMDENEGPVTKSIRLTAALILRNLVTYSSTAKRSLKRYEPHLANIALSNVEASGVLSHIMYELSQ