Dust002936.1
Basic Information
- Insect
- Drosophila ustulata
- Gene Symbol
- -
- Assembly
- GCA_035047365.1
- Location
- JAWNPT010000057.1:16190561-16192186[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.7e-15 7.2e-12 44.8 0.0 2 45 372 415 371 415 0.95 2 3 0.075 1.1e+02 2.6 0.0 28 37 445 454 444 459 0.90 3 3 2e-20 3e-17 62.1 0.0 2 42 481 521 480 523 0.96
Sequence Information
- Coding Sequence
- ATGGGTCACTCGTCCACAATTATGGATATCCAGCGTGTTCTGCTCAACCAGCAGAGCAACAACCAGCAATGCGAAGTCCTCCTGGTGGCCAGAGACGGCATCAGCGTGCGCGCCCATCTTTTCGTGCTCAGCACCTGTAGCGATCTCATGCGCAACTTGCTCGTCGACTTGCCCGTCGGCCAAGAGGCCACCGTCATTCTGCCCGACATACGCGGCGAGCTGCTCGAGAGCATGTTGTCGTTCATTTACATGGGTGAGACAAGTTTGCCGTCGGCGTTGCTCACCGAGTTCCTGGAGGCCATTAATCTGTTGGGCATTAAGTCAGCCATCAGCTTTGAAACGAATCCCACAGCGATGAGCACAGCGGGTGTCGTGAGTGGGGCTATGGCTGTGGAGGCAGCTAAGTCCATCAGTGGATTGCACATTGCCAATACCACACTGCTGCcggaggaagaggaagaggaggaAGATGTCTCCAATGTAGTGGTTGGCAAGCTGGAGGTGGGCAACACGGTACTCGCTGATGCGCAGCATagtcaacagcagcatcagcaggaTGGCGGAAGATCTCTGGAGTTTCTCGATGTCTACAGTGATCAGCCGAAAATTACATATTCCATTGAGCACATGGGGGGCACATCGAGTGGCAATCAATACATCCTAACCGAGAACACGGGCACATTTACCATCACACAATCGGCATCGTCGGTGACCAAGTTGGGCGCAGCCACAACTGTGGTGGATGCCGTCACAGGCGATGAGTTGGCTGTCGAAGACGCCGAGGCAGATGTGGACGATGCTGATCACGATGAGTCCGAGTCGCATCTCATTGAGGAGCACTATGTGCCATCGGCTGGGCCTTTAATAGAAATGGGAGCCGATGCTGATGTGGAAATGAATGAGGATGCAATGCACGAGGAGGATGTAGGCGAtgaggatgacgatgacgaggaATTAATGGATATAAAGCCACGCAAATCGCAGTTAGACTTGAAGCTGGTTAAGACTCGCGTACAGCAACGTCAGCAGCCAGCTGCCAAGGCCTCCAAGAAGACAATGAccaaacaacatcaacagttTGCCGCTCTCAAAAAGGAAATCAAGGATGATATCAATGATGCACTGGAACTGGCAGCAGTTGCGGTGCTCCACGAAGGTCTCAGCCTGCAAAAGGCGGCGGATCGTTTCGACATATCGAAAACTGTCTTGTGGCGTCGCGTGCGCTCCAATCCTGCTTACATGCGAATCAAAAAGGAGAAGCCATCTCTCTCCGAGGCATATGAACGCTTGAAGAATGGCGATTCGCTGAAGAGTATTAGCCAAGATCTAAGAATTCCTATGTCGACGTTACATCGCCACAAGGTCCGACTGGCGGCCCAAGGTCGTCTGCCCGAATTTGTGTCCTGCCGAAGGCGTGACAGCACGCCGAAAGACGAACTGAGGGAGAAGCTGGCCAAGGCAGTGCATGCCTGCATCAATGGTGGCATGTCGCAGAATCATGCGGCGAATCTCTTCGAGATACCCAAGAGCACACTCTGGCGTCACTTGCAGCGCCGGGTCACAGAGGCTGAGCGTAAGGTCAAGGAGGAAcaggaggacgacgacgaggaagATATTCTAAGTTAa
- Protein Sequence
- MGHSSTIMDIQRVLLNQQSNNQQCEVLLVARDGISVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTAMSTAGVVSGAMAVEAAKSISGLHIANTTLLPEEEEEEEDVSNVVVGKLEVGNTVLADAQHSQQQHQQDGGRSLEFLDVYSDQPKITYSIEHMGGTSSGNQYILTENTGTFTITQSASSVTKLGAATTVVDAVTGDELAVEDAEADVDDADHDESESHLIEEHYVPSAGPLIEMGADADVEMNEDAMHEEDVGDEDDDDEELMDIKPRKSQLDLKLVKTRVQQRQQPAAKASKKTMTKQHQQFAALKKEIKDDINDALELAAVAVLHEGLSLQKAADRFDISKTVLWRRVRSNPAYMRIKKEKPSLSEAYERLKNGDSLKSISQDLRIPMSTLHRHKVRLAAQGRLPEFVSCRRRDSTPKDELREKLAKAVHACINGGMSQNHAANLFEIPKSTLWRHLQRRVTEAERKVKEEQEDDDEEDILS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_00589471;
- 80% Identity
- iTF_00614295;