Basic Information

Gene Symbol
onecut
Assembly
GCA_018904565.1
Location
JAEIHY010019502.1:3843-7586[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.4e-38 4e-34 116.8 0.3 2 78 733 809 732 810 0.97

Sequence Information

Coding Sequence
ATGGAATCGATTGATCAAATAACTGATCCGCGGCCGACATTTAGCCAGGATTTAGTTGAAGATGCCACTGAGTTTATTACAGAACATCATTCTCAGTCAAATCAAGAGGGAAGAGGTCCTGGTCCTAGTTCTGATCTTGATGCCGATGAGGTTCTATCAATGCAAACAATAATTAGCGAAAAAAAACATCGTTCCAGGCCAGATTCGGCAGCTGTTGTCATGGTTATCGATGAAATGGATAGGCAGACGACAACAACATATCAAATTGTGCCTCATCAACAACTGCAGCAATTACAGCAGCCAAGAACTATGTCCTTCGGAATGGTCCAACAGGATCAGCACCATGATCATCGCATGATCGACAGCAGTCCCGTGGATTCTTTTGTGACCTCCGATATAAGCTTGGATGGACTGACAGTGGATGCCATGAGCCATGCGACAATTCTACCCCAAGTATTGACTACAGTGAAGCCTGAGACAATGAGCAAGTTGCTTATAGTTCAAACAAAGTCAGGGTTGGATCGAACCAACAGTAAGCGAATAAGGATGCATGTGGACGTATCGAGTGTAAATGTTGGACTTGGCGCTGATGATGATCTGGATGAGATATCATCAGATGGCGAAGGAGTAACATTGAATCAACATCATCACCAGCAGGTGTACAGTCTGGCAAGCCAGCATCATTCATCACATCAGCTCCAGGGTCATGGCCAAACTATTCTTGGTCAGTTGGACATGGGACATGGTATGGCAGGAGGTGTTATTGTTAATTCCCAAGACGTGGATGAAGAAGATGGCAATGGAGATCCCGATGGGGATGTCGAGGAAGAAGATGATGATGAGATAGATCGAGGCCAGTTGATTAGTCAAAGTTCATATCAGACGCTGACATCGGTTAATGATCGTTTGTCGCCCCCGGGCTTTAGTCCAACATCATATGCGACATTGACGCCCATCCAACCCCTTCCGCCCATATCAACCATGTCGGAGAAGTTCGCCTATTCGGGACACATTTCTGGAAGCGGCGATAGTGGCGACACAGATGTCAATGGAGGAGAAGGAAGCAGAGTTGAGGCCACTACCAATGCCTCATCAGAGACTGTAGTTGGAGGAGGTAATGGTACATCCTCCGAATGCAACTCGTACTCGTCAGCCTTACCCCTGACCATGAGTGGCGGTCAGCATCTTGGGTTAGGAGTCTCACCGTATTCCTCATATGAAAAGCTAACGTCTATGATATCACCACCACCTAATAATTACCTGGTTTCATGTGACATGCATGCCGCCACCGTTGTCACGTCGTCGGGACGTTTGCCAAATCCTTCCCAGCTGGAGGAGTTGAGCCATAATGGAAACAAAAAGGATTCGGCGACACAGGAGAATATAGAAGAAAATCCAGGAGGAGGAAGTGGAGGAGAAAAATTCACTTACTCCGGCCACATCTCTGGGGGAGATAGTGGCGATACAGACATCCATTGTGAAAAATTCTCCTACTCTGATCATATTTCTGGTGGAGATAGTGGCGACACTGATGTTCATGGGGAAAAGTTCTCTTACTCCGATCATATTTCTGGAGGCGATAACGTTACTGATGTCAACGGAGGAACAACTTGGCTCCAAATGGCTTCAGAGCGGGAGTCACGACTGCACCTGCCCTCGGAACACGGTCTGGAGGACCGATTTCATTTGGCCCCCGAAAGAAAACCGCGACTCAACTTAACGCCACATGAGCGGACGTCTACGCGCTTGCAGATGCCGCGTCACCTGCATCATCAGGTGACAGCAGAAGCTGTTCCGTCAATCTGTACCACAGATTGGAAGACAGATGAAGATTGGAAGCATGGATCTAATTCAATTCTACCCGTGGTTGTGTCCCTAACACCGACACCGCCGCCGCCACCGTCCATAACAGATATTGATACGGCTTCGGCCGTGGGACTGAAGCTAAGTGATCGGATGTCTCCAGGACAACAAAGATCGCAGCAATATTTCCTGAACAAGAGCCAGCAGCAGGAGATTGGAGGAGCAACAGATCACGTTACCCCGGACTCCTCCGGTTGTGGCATTCAACAGTCGAGTCTTTTGAATGGATTTCAAAACATACAACAGCAATGTTCAAAGATCGCCATCTCCGCCTCGCCCAAGAACGGAGGAGGAGGCGGATCATCTAGTCGTACTAGTGGGAACTCCACTGACATGGAGGAAATCAATACCAAGGATCTGGCTCAGCGTATTTCAGCGGAGCTAAAGCGATACAGTATTCCACAGGCAATTTTTGCTCAACGTGTGCTGTGCCGTTCGCAAGGCACCCTTTCCGATCTCCTGCGCAACCCAAAGCCATGGTCGAAGCTCAAATCAGGGCGAGAGACCTTCCGGCGAATGTACAAATGGCTGCAAGAGCCGGAGTTCCAACGGATGTCGGCATTGCGTATGGCAGCGGCTCAAATTCCACAACGTATGACGCCTTTGAGCAGTGGTAATACTGCTGCGACTGGTCCACTAGGATCAGCTGGAACGGGATCAGGAACTAATGATAACAGAGACGTTATGACGGCGGATACGGAGACTCATGGCGGTCCGTCAACTATGTCACCAAGAGCCGGACTTAATGAACCCTTGTCTACAGTAGGCTCTGTAGCTGGCCCTAATCTCTCCGTCACCTCCAACGTCGTCGTAAATTGCCGACGAAAGGAGGAGCCGCAGATCGAGCAAATGCCACAGCCAAAGAAGCCACGACTGGTTTTCACCGATCTACAGCGACGAACGTTACAAGCTATTTTTAAAGAAACCAAGCGACCTTCAAAGGAAATGCAAGTGACTATAGCCAGACAGTTGGGCTTAGAGCCCACAACGGTGGGAAATTTCTTTATGAACGCAAGGAGGCGATCAATGGACAAGTGGCGTGATGATGATTCCAAAAATAACACAAATATGCAGCATGTCATGCAAAATCGTCAGCAGCCACCGCAAGATGAGCAAGATGAAGATCGTAATCATGTTCCCAATCAAAATCATAATCCTCGTCAGAGCCTATCGCACGATAACTACTCAGCCCTGCACACGACAGCCATGTCTCCGCTGGGTGCTTTTGACGAAGATGCCGATATGGATTTGGAGTTGGAAAGTCATGATTTCGATTTGGTTGATCCCGATCATCAAGGTGATAATAATGACCGTCACGGTGATATGTTGTGA
Protein Sequence
MESIDQITDPRPTFSQDLVEDATEFITEHHSQSNQEGRGPGPSSDLDADEVLSMQTIISEKKHRSRPDSAAVVMVIDEMDRQTTTTYQIVPHQQLQQLQQPRTMSFGMVQQDQHHDHRMIDSSPVDSFVTSDISLDGLTVDAMSHATILPQVLTTVKPETMSKLLIVQTKSGLDRTNSKRIRMHVDVSSVNVGLGADDDLDEISSDGEGVTLNQHHHQQVYSLASQHHSSHQLQGHGQTILGQLDMGHGMAGGVIVNSQDVDEEDGNGDPDGDVEEEDDDEIDRGQLISQSSYQTLTSVNDRLSPPGFSPTSYATLTPIQPLPPISTMSEKFAYSGHISGSGDSGDTDVNGGEGSRVEATTNASSETVVGGGNGTSSECNSYSSALPLTMSGGQHLGLGVSPYSSYEKLTSMISPPPNNYLVSCDMHAATVVTSSGRLPNPSQLEELSHNGNKKDSATQENIEENPGGGSGGEKFTYSGHISGGDSGDTDIHCEKFSYSDHISGGDSGDTDVHGEKFSYSDHISGGDNVTDVNGGTTWLQMASERESRLHLPSEHGLEDRFHLAPERKPRLNLTPHERTSTRLQMPRHLHHQVTAEAVPSICTTDWKTDEDWKHGSNSILPVVVSLTPTPPPPPSITDIDTASAVGLKLSDRMSPGQQRSQQYFLNKSQQQEIGGATDHVTPDSSGCGIQQSSLLNGFQNIQQQCSKIAISASPKNGGGGGSSSRTSGNSTDMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWLQEPEFQRMSALRMAAAQIPQRMTPLSSGNTAATGPLGSAGTGSGTNDNRDVMTADTETHGGPSTMSPRAGLNEPLSTVGSVAGPNLSVTSNVVVNCRRKEEPQIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDSKNNTNMQHVMQNRQQPPQDEQDEDRNHVPNQNHNPRQSLSHDNYSALHTTAMSPLGAFDEDADMDLELESHDFDLVDPDHQGDNNDRHGDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00593744;
90% Identity
iTF_00484927;
80% Identity
iTF_00613413;