Basic Information

Gene Symbol
onecut
Assembly
GCA_008044335.1
Location
VNJL01007770.1:31716-35363[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-38 4.8e-34 116.8 0.3 2 78 708 784 707 785 0.97

Sequence Information

Coding Sequence
ATGGAATCGATTGATCAAATAACTGATCCGCGGCCGACATTTAGCCAGGATTTAGTGGAAGATGCCACTGAGTTTATTACAGAACATCATTCTCAGTCAAATCAAGAGGGAAGAGGTCCTGGTCCTAGTTCTGATCTTGATGCCGATGAGGTTCTATCAATGCAAACAATAATTAGCGAAAAAAAACATCGTTCCAGGCCAGATTCGGCAGCTGTTGTCATGGTTATCGATGAAATGGATAGGCAGACGACAACAACATATCAAATTGTGCCTCATCAACAACTGCAGCAATTACAGCAGCCAAGAACTATGTCCTTCGGAATGGTCCAACAGGATCAGCACCATGATCATCGCATGATCGACAGCAGTCCCGTGGATTCTTTTGTGACCTCCGATATAAGCTTGGATGGACTGACAGTGGATGCCATGAGCCATGCGACAATTCTACCCCAAGTATTGACTACAGTGAAGCCTGAGACAATGAGCAAGTTGCTTATAGTTCAAACAAAGTCAGGGTTGGATCGAACCAACAGTAAGCGAATAAGGATGCATGTGGACGTATCGAGTGTAAATGTTGGACTTGGCGCTGATGATGATCTGGATGAGATATCATCAGACGGCGAAGGAGTAACATTGAATCAGCATCATCACCAGCAGGTGTACAGTCTGGCAAGCCAGCGTCATGGCCAAAATATTCTTGGTCAGTTGGACATGGGACATAATATGGCAGGAGGTGTTATTGTTAATTCCCAAGACAGTGAAAAAGAAGTGGATGAAGAAGATGGCAATGGAGATCCCGATGGAGATGTCGAGGAAGAAGATGAGATAGATCGAGGCCAGTTGATTAGTCAAAGTTCATATCAGACGCTGACATCGGTTAATGATCGTTTGTCGCCCCCGGGCTTTAGTCCAACATCATATGCGACATTGACGCCCATACAACCGCTTCCGCCCATATCAACCATGTCGGAGAAGTTCGCCTATTCGGGACACATTTCTGGAAGCGGCGATAGTGGCGACACAGATGTCaatggaggagaaggaggcagAGTAGTTGAGGCCACTACCAATGCCTCATCAGAGACTGTAGTTGGAGGAGGTAATGGTACATCCTCCGAATGCAACTCGTACTCGTCAGCCTTACCCCTGACCATGAGTGGCGGTCAGCATCTTGGGTTAGGAGTCTCACCGTATTCCTCATATGAAAAGCTAACGTCTATGATATCACCACCACCAAATAATTACCTGGTTTCATGTGACATGCATGCCGCCACCGTTGTCACGTCGTCGGGACGTTTGCCAAATCCTTCCCAGCTGGAGGAGTTGAGCCATAACGGAAACAAAAAGGATTCGGGGACACAGGAGAATATAGAAGAAAATCcaggaggaggaagtggagGAGAAAAATTCACTTACTCCGGCCACATCTCTGGTGGGGGAGATAGTGGCGATACAGACATCCATTGTGAAAAATTCTCCTACTCTGATCATATTTCTGGTGGAGATAACGTTACTGATGTCAACGGAGGAACaaCTTGGCTCCAAATGGCTTCAGAGCGGGAGTCACGACTGCACCTGCCCTCGGAACACGGTCTGGAGGACCGATTTCATTTGGCCCCCGACAGAAAACCGCGACTCAACTTAACGCCACATGAGCGGACGTCTACGCGCTTGCAGATGCCGCGTCACCTGCATCATCAGGTGACAGCAGAAGCTGTTCCGTCAATGTGTACCACAGATTGGAAGACAGATGAAGATTGGAAGCATGGATCTAATTCAATTCTACCCGTGGTTGGGTCCCTAACACcgacaccgccgccgccaccgtcCATAACAGATATTGATACGGCTTCGGCCGTGGGACTGAAGCTAAGTGGTCGGATGTCTCCAGGACAACAAAGATCGCAGCAATATTTCCTGAACaagagccagcagcaggagattgGAGGAGCAACAGATCACGTTACCCCGGACTCCTCCGGTTGTGGCATTCAACAGTCGAGTCTTTTGAATGGATTTCAAAACATACAACAGCAATGTTCAAAGATCGCCATCTCCGCCTCGCCCAAgaacggaggaggaggcggatcATCTAGCCGTACTAGTGGGAACTCCACTGACATGGAGGAAATCAATACCAAGGATCTGGCTCAGCGTATTTCAGCGGAGCTAAAGCGATACAGTATTCCACAGGCAATTTTTGCTCAACGTGTGCTGTGCCGATCGCAAGGCACCCTTTCCGATCTCCTGCGCAACCCAAAGCCATGGTCGAAGCTCAAATCGGGGCGAGAGACCTTCCGGCGAATGTACAAATGGCTGCAAGAGCCGGAGTTCCAACGGATGTCGGCATTGCGTATGGCAGCGGCTCAAATTCCACAACGTATGACGCCTTTGAGCAGTGGTAATACTGCTGCGACTGGTCCACTAGGATCAACTGGAACGGGATCAGGAACTAATGATAACAGAGACGTTATGACGGCGGATACGGAGACTCATGGCGGTCCGTCAACTATGTCACCAAGAGCCGGGCTTATTGAACCCTTGTCTACAGTAGGCTCTGTAGCTGGACCTAATCTCTCCGTTACCTCCAACGTCGTCGTAAATTGCCGACGAAAGGAGGAGCCGCAGATCGAGCAAATGCCACAGCCAAAGAAGCCAAGACTGGTTTTCACCGATCTACAGCGACGAACGTTACAagctatttttaaaGAAACCAAGCGACCTTCAAAGGAAATGCAAGTGACTATAGCCAGACAGTTGGGCTTAGAGCCCACAACGGTGGGAAATTTCTTTATGAACGCAAGGAGGCGATCAATGGACAAGTGGCGTGATGATGATtccaaaaataacacaaatatgCAGCATGTCATGCAAAATCGTCAGCAGCCACCGCAAGATGAGCAAGATGAAGATCGTAATTATGTTCCCAATCAAAATCATAATCCTCGTCAGAACCTATCGCACGATAACTACTCAGCCCTCCACACGACAGCCATGTCTCCGCTGGGTGCTTTTGACGAAGATGCCGATATGGATTTGGAGTTGGAAAGTCATGATTTCGATTTGGTTGATCCCGATCATCAAGGTGATATGTTGTGA
Protein Sequence
MESIDQITDPRPTFSQDLVEDATEFITEHHSQSNQEGRGPGPSSDLDADEVLSMQTIISEKKHRSRPDSAAVVMVIDEMDRQTTTTYQIVPHQQLQQLQQPRTMSFGMVQQDQHHDHRMIDSSPVDSFVTSDISLDGLTVDAMSHATILPQVLTTVKPETMSKLLIVQTKSGLDRTNSKRIRMHVDVSSVNVGLGADDDLDEISSDGEGVTLNQHHHQQVYSLASQRHGQNILGQLDMGHNMAGGVIVNSQDSEKEVDEEDGNGDPDGDVEEEDEIDRGQLISQSSYQTLTSVNDRLSPPGFSPTSYATLTPIQPLPPISTMSEKFAYSGHISGSGDSGDTDVNGGEGGRVVEATTNASSETVVGGGNGTSSECNSYSSALPLTMSGGQHLGLGVSPYSSYEKLTSMISPPPNNYLVSCDMHAATVVTSSGRLPNPSQLEELSHNGNKKDSGTQENIEENPGGGSGGEKFTYSGHISGGGDSGDTDIHCEKFSYSDHISGGDNVTDVNGGTTWLQMASERESRLHLPSEHGLEDRFHLAPDRKPRLNLTPHERTSTRLQMPRHLHHQVTAEAVPSMCTTDWKTDEDWKHGSNSILPVVGSLTPTPPPPPSITDIDTASAVGLKLSGRMSPGQQRSQQYFLNKSQQQEIGGATDHVTPDSSGCGIQQSSLLNGFQNIQQQCSKIAISASPKNGGGGGSSSRTSGNSTDMEEINTKDLAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWLQEPEFQRMSALRMAAAQIPQRMTPLSSGNTAATGPLGSTGTGSGTNDNRDVMTADTETHGGPSTMSPRAGLIEPLSTVGSVAGPNLSVTSNVVVNCRRKEEPQIEQMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDSKNNTNMQHVMQNRQQPPQDEQDEDRNYVPNQNHNPRQNLSHDNYSALHTTAMSPLGAFDEDADMDLELESHDFDLVDPDHQGDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00593744;
80% Identity
iTF_00485036;