Basic Information

Insect: Drosophila truncata
Gene Symbol: stc
Assembly: GCA_008042515.1
Location: VNJQ01004079.1:19990-23559[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 1.9e+04 -4.1 1.6 15 19 412 416 411 416 0.81

2 14 0.048 4.5e+02 1.1 2.2 4 11 445 452 444 453 0.91

3 14 6e-07 0.0056 16.7 15.1 1 19 457 474 457 474 0.93

4 14 2.8e-05 0.26 11.4 9.0 1 18 510 527 510 528 0.95

5 14 2 1.9e+04 -6.3 3.9 7 13 532 538 532 539 0.74

6 14 3.5e-09 3.3e-05 23.9 13.6 1 19 568 586 568 586 0.98

7 14 3.5e-05 0.32 11.1 16.3 4 19 634 649 627 649 0.87

8 14 0.068 6.3e+02 0.6 11.8 1 11 689 699 689 711 0.79

9 14 4.9e-10 4.6e-06 26.6 15.5 1 18 716 733 716 734 0.97

10 14 1.7 1.6e+04 -3.9 0.9 6 10 763 767 763 768 0.81

11 14 2 1.9e+04 -9.1 11.6 10 18 781 790 770 791 0.71

12 14 2 1.9e+04 -4.4 1.5 9 13 797 801 796 802 0.79

13 14 1.1e-08 0.0001 22.3 10.9 1 17 827 843 827 849 0.89

14 14 5.3e-07 0.005 16.9 13.1 1 19 859 878 859 878 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	1.9e+04	-4.1	1.6	15	19	412	416	411	416	0.81
2	14	0.048	4.5e+02	1.1	2.2	4	11	445	452	444	453	0.91
3	14	6e-07	0.0056	16.7	15.1	1	19	457	474	457	474	0.93
4	14	2.8e-05	0.26	11.4	9.0	1	18	510	527	510	528	0.95
5	14	2	1.9e+04	-6.3	3.9	7	13	532	538	532	539	0.74
6	14	3.5e-09	3.3e-05	23.9	13.6	1	19	568	586	568	586	0.98
7	14	3.5e-05	0.32	11.1	16.3	4	19	634	649	627	649	0.87
8	14	0.068	6.3e+02	0.6	11.8	1	11	689	699	689	711	0.79
9	14	4.9e-10	4.6e-06	26.6	15.5	1	18	716	733	716	734	0.97
10	14	1.7	1.6e+04	-3.9	0.9	6	10	763	767	763	768	0.81
11	14	2	1.9e+04	-9.1	11.6	10	18	781	790	770	791	0.71
12	14	2	1.9e+04	-4.4	1.5	9	13	797	801	796	802	0.79
13	14	1.1e-08	0.0001	22.3	10.9	1	17	827	843	827	849	0.89
14	14	5.3e-07	0.005	16.9	13.1	1	19	859	878	859	878	0.96

Sequence Information

Coding Sequence: ATGGACGAGTATTGGCAGCAGCTGACCAACGGTGGTGTTCGTGGAGGAGCCGCCACCAACGGCCATGGTCACGATGCAGGGTCGCAAGCGTcgagcaacagcggcagcggagcaactaccagcagcaacagcaacaacaattatgtGAACTTTAATCAGTTCATTCAACAGCACAACCTGGGCGGCGGATCATCGCCCACTGCCAGCGCCGGAACAATGCAGCATCCACTGAGCACCGGCAATAATACAAGCTACAATatcggcggcggtggaggagcCTTCGGCCTGAACCCGTCAGTGGCTTCGCTCGGGAATTCCAACAGCTTTGGGCATCTATATTCACAGCCCATGTTTCCATCGTACCACAATGGCGATGGTGGTGCCGCCTCCTTCGGCAACAACTATGATGATACCTTTTCTAATCTGTACACACCGTTCGGCAACAATCCCTTTGACTTCAGCTCTTCCAAGCTGCAGGCCTCAGCCCCCGAATTTGTGCCCAATCTGGCCAAGCTGAGTCTGAACGAGGTGCCAGCGccggaggcggcggcggcaacgacGCCCAACGGAAACAGGAACATCACTGCCAGCCAAGAAACTGCCATTAGTGTGACGGGAACAAGAGCCCAACAATCAGGGGGAAGCGGTGtatcaggaggaggaggaggaggaggaggagagcctCAACACATTCGTTTATCCGCCAACAATTACGAAAGAGATCGCGGCGACAGAGACTCGCGACCGGGAAGCACCCGGCAGCAGCGTCGCTCCGACTACCGCGATGACCGCGAGGATCGATACGAGCGAAACGATCGCAAGAAGccccagaagcagcagcgctACGACAATCATAGAAGCAACAAACGAAGGGACGACTGGAATCGTAACAGGGACCGCATCAACGGCTTTCCCCGGGCCGCTGACGAGCTGGACACGAGCAACGAGAGTGCTCAGCCGTCGCCCGAAAAGCAGCAAacgacgcagcagcagcagcagcaaatctCCCCGCGGAGAGCTGTGCCGCCTCCACCGGCGGCGGATAATGAGAAGCTATCGCAGCGAGAGAAACTCATACGCGATATCGAGCAGCGGCGACTGGAGTGCCTGGTGTGCGTGGAGGCAATCAAGGCGCATCAGCCGACATGGTCCTGCCAGAACTGCTACCATGTCCTCCACCTCAAGTGCACTATTACCTGGGCGAGCAGCTCCAAGTCTGATGTCGGCTGGCGGTGTCCCGCCTGTCAGAATGTCCTCCAAGAGCTGCCGCGCGAGTATCTCTGCTTTTGCGGAAAACTCAAGAACCCGCCGGTGTCCCGTACGGAACTGGCACACAGCTGCGGCGAGGTCTGCTGCCGGATCGAGGGATGCAGCCATGCTTGCACTCTTCTATGCCATCCGGGACCCTGTCCGCCGTGCCAGGCCAATGTGGTGCGCAGCTGTGGTTGCGGCCGCAGCTCCAAGACCATGCAGTGCGCCATGAAGGAAGATCTCCTCTGCGGCGAGATCTGTGACAAGGTGCTTAACTGTGCCGAGCATCGGTGTCGCGCCGAGTGTCATGCGGGCAAGTGTACAGCTTGTGCGGAGCAGGTGGAGCAGCACTGTCACTGCGGCAAGCAGGAGCGCCAAGTGCTGTGCACACGCGAGAACCAGGACAAGCGGAGCTACTCGTGCAAAGAGAGTTGCGGGAAGCCTCTGCCCTGCGGTAATCACAAGTGCAAGGACTCGTGCCACGCTGGAAGCTGTAGACCTTGTAAGCTGAGTCCCGAACAGATAACCAGCTGTCCCTGCGGTAAGATGCCGGTTCCGGCTGCCCAACGCACGAGCTGCCTAGATCCCATACCCACTTGCGAGGGTATCTGCTCGAGGACGCTGCGCTGCGGCAAGCCAGCTCATCCCCATCAATGCGCCAGCAAGTGCCACCTGGGTCAGTGTCCGCCGTGTCAAAAGCAAACGGCCGTTAAGTGTCGCTGCGGTCACATGGATCAGATGATCAAGTGCCGGCAGCTGTCCACGCGGGCGGATGATGCCCGCTGTAAGCGACGCTGCACGAAAAAGCGCAGCTGCGGCAAGCACAAATGCAACGCGGAATGCTGCATCGACATTGACCACGCCTGCCCGCTGCCCTGCAACCGGACGTTGAGCTGCGGCAAGCACAAGTGCGATCAGCCCTGCCATCGAGGCAACTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTCTACTGCGAGTGCGGGGCCGAAGTGATTTATCCGCCGGTGCCGTGCGGCACCAAGAAGCCGCTTTGCAAGCGACCCTGCTCGCGATCGCATCCTTGCGAGCATCCGCCGCAGCACAACTGCCACTCGGCGGCCACCTGCCCGCCCTGCATGATGTTCACCACCAAGTTCTGCCACGGGGGCCACGAGCAGCGCAAGACTATTCCCTGCTCGCAGCCCAACTTCAGCTGTGGCCTGGCGTGTGGCAAGCCTTTGCCGTGCGGCCGTCATAAATGCATCAAGCCGTGTCACGAGGGAGCCTGTCAGAGTGCCGGCGAGGTGTGCCGTCAGAGCTGCACTAAGCCGCGGACGCTCTGCGGCCATAAGTGTGCCGCCGCCTGTCATGAAGGCGCCTGTCCTGAGACGCCGTGCAAGGAGCTTGTGGAAGTTCAATGTGAATGCGGCCACCGGAAGCAGAGTCGCAGCTGTCAGGAGCTGGCCAGGGAGCATAGTCGGATTGCCACCGCCCAGCTGGCCTCCTCCATGGCGGAGATGTCGCGTGGCAACTACATGGAGCTAAGCGAAATTCTGGCCCCAGCCAAGACCAGCAAATCGAACCGAACTTTGGACTGCAACGATGAGTGCCGTCTGCTGGAGCGTAACCGTCGGTTAGCATCTGCCCTGTCATCGGGCAACCCGGACACAAAGCAAAAGTCGCTGACTAAATACTCAGAGTTTGTTCGAGGCTTTGCCAAGAGGAATCCGGCTCTGACCAAGAGCGTGTACGAGACGCTAAGCGATTTGGTGAAGCTGGCCAAGGAGAGCAAGCAGCGGTCTCGGAGTCACTCCTTCCCCACGATGAACCGCGAGAAGAGGCAATTGGTGCACGAGCTGTGCGAGATATTTGGCATTGAATCAGTGTCCTACGATAAGGAGCCCAATCGAAATGTTGTGGCCACGGCCCACAAGGAGAGGtgctggctgcctgccacGAGCATCATGGAGGTGCTGGCTCGTGAGTCTGGACAACGTCGAGTCCCTGTGCCCAGCAACAATGCATGGAGCTTAAAGAAATAG
Protein Sequence: MDEYWQQLTNGGVRGGAATNGHGHDAGSQASSNSGSGATTSSNSNNNYVNFNQFIQQHNLGGGSSPTASAGTMQHPLSTGNNTSYNIGGGGGAFGLNPSVASLGNSNSFGHLYSQPMFPSYHNGDGGAASFGNNYDDTFSNLYTPFGNNPFDFSSSKLQASAPEFVPNLAKLSLNEVPAPEAAAATTPNGNRNITASQETAISVTGTRAQQSGGSGVSGGGGGGGGEPQHIRLSANNYERDRGDRDSRPGSTRQQRRSDYRDDREDRYERNDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFPRAADELDTSNESAQPSPEKQQTTQQQQQQISPRRAVPPPPAADNEKLSQREKLIRDIEQRRLECLVCVEAIKAHQPTWSCQNCYHVLHLKCTITWASSSKSDVGWRCPACQNVLQELPREYLCFCGKLKNPPVSRTELAHSCGEVCCRIEGCSHACTLLCHPGPCPPCQANVVRSCGCGRSSKTMQCAMKEDLLCGEICDKVLNCAEHRCRAECHAGKCTACAEQVEQHCHCGKQERQVLCTRENQDKRSYSCKESCGKPLPCGNHKCKDSCHAGSCRPCKLSPEQITSCPCGKMPVPAAQRTSCLDPIPTCEGICSRTLRCGKPAHPHQCASKCHLGQCPPCQKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCSRSHPCEHPPQHNCHSAATCPPCMMFTTKFCHGGHEQRKTIPCSQPNFSCGLACGKPLPCGRHKCIKPCHEGACQSAGEVCRQSCTKPRTLCGHKCAAACHEGACPETPCKELVEVQCECGHRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPAKTSKSNRTLDCNDECRLLERNRRLASALSSGNPDTKQKSLTKYSEFVRGFAKRNPALTKSVYETLSDLVKLAKESKQRSRSHSFPTMNREKRQLVHELCEIFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00489062;
90% Identity: iTF_00489062;
80% Identity: -