Basic Information

Insect: Drosophila truncata
Gene Symbol: -
Assembly: GCA_008042515.1
Location: VNJQ01005002.1:62576-65938[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00018 0.016 15.7 0.7 3 23 184 205 183 205 0.96

2 16 0.0027 0.24 12.0 1.1 1 23 222 245 222 245 0.92

3 16 0.0023 0.2 12.3 4.1 1 23 316 339 316 339 0.96

4 16 0.014 1.2 9.8 1.8 2 23 395 416 394 416 0.95

5 16 0.85 74 4.2 0.6 1 20 531 550 531 552 0.85

6 16 0.006 0.52 10.9 0.7 1 23 561 583 561 583 0.95

7 16 0.00021 0.019 15.5 0.9 1 23 590 613 590 613 0.96

8 16 9e-05 0.0079 16.7 0.6 2 23 622 643 621 643 0.96

9 16 0.0011 0.094 13.3 0.0 2 20 670 688 669 690 0.94

10 16 0.00045 0.04 14.5 1.1 1 23 731 754 731 754 0.96

11 16 3.7 3.2e+02 2.2 1.2 1 21 761 781 761 782 0.91

12 16 0.02 1.7 9.3 0.1 1 23 791 814 791 814 0.95

13 16 2.3e-06 0.0002 21.7 0.5 1 23 835 858 835 858 0.97

14 16 0.081 7.1 7.4 0.1 1 23 868 890 868 890 0.92

15 16 7.8e-05 0.0068 16.9 2.0 1 23 896 918 896 918 0.99

16 16 3.1e-05 0.0027 18.1 0.9 1 23 924 946 924 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00018	0.016	15.7	0.7	3	23	184	205	183	205	0.96
2	16	0.0027	0.24	12.0	1.1	1	23	222	245	222	245	0.92
3	16	0.0023	0.2	12.3	4.1	1	23	316	339	316	339	0.96
4	16	0.014	1.2	9.8	1.8	2	23	395	416	394	416	0.95
5	16	0.85	74	4.2	0.6	1	20	531	550	531	552	0.85
6	16	0.006	0.52	10.9	0.7	1	23	561	583	561	583	0.95
7	16	0.00021	0.019	15.5	0.9	1	23	590	613	590	613	0.96
8	16	9e-05	0.0079	16.7	0.6	2	23	622	643	621	643	0.96
9	16	0.0011	0.094	13.3	0.0	2	20	670	688	669	690	0.94
10	16	0.00045	0.04	14.5	1.1	1	23	731	754	731	754	0.96
11	16	3.7	3.2e+02	2.2	1.2	1	21	761	781	761	782	0.91
12	16	0.02	1.7	9.3	0.1	1	23	791	814	791	814	0.95
13	16	2.3e-06	0.0002	21.7	0.5	1	23	835	858	835	858	0.97
14	16	0.081	7.1	7.4	0.1	1	23	868	890	868	890	0.92
15	16	7.8e-05	0.0068	16.9	2.0	1	23	896	918	896	918	0.99
16	16	3.1e-05	0.0027	18.1	0.9	1	23	924	946	924	946	0.97

Sequence Information

Coding Sequence: ATGACGCGGACGTGCAGAATCTGCGGCAGCGCTGACGGACGCTACTGGATTGAGACGCCCGTGGAAAAGTACGCCGAGAAGACATTCGGACAGCTGCTGGTCGAGCTAACGCGGATCGAGGTGGCTATGGCTCAGGCGGAGAAGTTCCCCCAGTGGCTGTGCTCTGCCTGCGCCCAGAAGCTGGAGACCACCTACGACTTTGTGCTGCAGGCGCGTCAAACGCACGAACTGTGGCTGCGCAAGCTGGACGACGACGATTCCGCGGACGAAATGCTGGGTTCAGAGGCCTTGGAGGCTCTCAGGGAGACGCCCATTCATTTGTTCGAAATCGAAGGGGTGACCATCAAATCAGAGGTGCTGGAGCCGCCTAAGAAAATGGGAAGAGGCGTGGCCGCCGCAGATCCTTTGGTACGCTCGCGCTTCGTCAAACGCACCATTGTGCACTTCAGTGACTCGGATGGAGGCGATCAGGACGATGTCCCGCTGCGCCAGCGCAAGGTTTCGGTATCCCCACAGCCCGTCGTCAGCGCCGAGGAGAAGCACAACATTTGCGAAGTGTGCAATAAGGCGTTTCGCTACGTTACCAACCTGTATCGCCACAAACAGCGGGATCATGGACTGCCCGCCAGGCCGGGCGAGGAGATAGACGATGATGACAACTACTACAAGTGCGACCAGTGCGACAAGGCTTACAAGTACGTGATGGCACTGGTGAAACACAAGCACGCAGAGCACGGAGCGAGTCTATTGCCCGCGAAGACTTCCAGGCGGAAGATGCCTGGCAGACCCTCGGTGATGCCCGGCGATGGGAGTCCGTCTAGTCCAGCTTCCACCTCGGGAACCTCCACGCAGCGCAGTCGAGGCAATACTGACGCCCTGGTGCACAGCATCATCAAGGCAGTAGAACTCTCGGACGAGGACGGCAACTGCAGCGCGGACAACTACTACAAGTGTAATCAGTGCAGCAAGTCCTACAAGTACATTGTCAGCCTGATAAAACACAAGCATAGGGAACACACGGATCAGGACAAAAAGCAGTCGGACTCTGAGGATGATCTACCGCTGGCATCCACATCCGCAGCCTTGGCATCGGCAGCCTCTGCTGCCAAGCCGTCGAGGATCAATCGACGCGTCGAGGACTTTGATCCACACAGCTGCGAGCCGAATGGAGCCAAGGAAATCAAGTGCATGATCTGTTTGCGTCGGTTTACCAAACTGCGCGAGCTGAGGGATCACCTGCACGCCCATCCCACTGACTTCGACTTCGAGGCCCATGGAGAACCCATCGAGCGCATAGCCGAGGGCTTTTTCAAGACTGCCGTCGAGTCCACGACGGAGGGCCTGAAGCGTCGCATTTTCCGGGATCTCAGGCTGGGCGTGTATGGCCGCTACTATTCCATAACGAACCAGGCGCGCTACGAGATGAATATGGACAGCTCGGACACGGATAGCGAGGGTGAGGGCGAGGAGGACGTTGTGCTGCGGCGCAGCTACGCCTGTGAGCTCTGTGACTCTTTGGAGGCCAGATGGCCGCGGAAGTACCTGTTGCACCAGCACCATCGACAAGAGCACTCCTGGCTGGACGCCCCCTATGTCTGCCAGCGCTGCGACTCCCGCTTCCTCAGTGCCCAGTTGCTGGAGCACCACACAAGCCGGTTGTGTCAGAACACGCTGAAGCGCTTCCAGTGCGACAAGTGTCCGCAGCGCTTCTTCTGGCGGCGGAACCTGCGCGCCCATCTCGTCGAGCACAAGAGCAAGCAAGAGTACTATTCGTGCGATCAGTGCTCCCGCAGCTTCCAGGATAAGAGCGCCGTTACCAAGCACAAGCTGATGGTGCACCGGGACGGCAATGCCCAGCTCATTCCCTGCCGCTGGTGCACCCGCACCTTCTATCGCCCAAGTCTGCTGTACAAGCACGTACAGCGGCACGGCTTCACAGGCCAGGATCTGCCGCTGGCCGAGACCCTGCTGGCGGACGCCTCCAAGCATACGGGTCAGAAGAGTATCCAGTGTAAAGTCTGTGATACTCAGTTCATCAGCGTGGCGGATCTGCGTCGCCACATTGTCATGCAGGGCGGTGATCACAGTGATCAACCATCGGCGTACATGATAAGCACTGAAGCTGGCTTTGAGCTCCTGCTGGAGGATACGGACGAGAGTGATGAGGAAAGTTACTCCGCCAGTAGAACTTACAGTTGTGATCTCTGCGATCTGAGTTTCCGGCGCCGAAGGGAAATGAGCGAGCATCAGTACTCCCTCCACAGCTTTGACAAGCTGCCACATTCCTGCGAGCATTGCATTTTCAAGACTGTGGATAAGTCCCTGCTGGATCAGCACTTGAGCAGACAGTGCAGAAACAGCGACAAGAAATTCATCTGCCCGCGTTGTGGCTACAAGTTCATGTGGGAGGAGAATCTCGCCCTGCACCTGGCCACCCAGCATTCTAAGCAAACCCCCACGCCGGAAAATCAGCCGCCGTCGCGAAGGAAACGACGCTTCCGCTACCAATGCCCCCACTGCTGGCGTTCCTTTGTCGTTCAGCCTAGCCTGGAGAAGCATATCCGGGACATGCACGTGGCCAAGAAGAACCCGGGCAAGAAGTACCTCTGCTCGCTCTGCGGCCTGGAAGCCCTGACGCCCAACAAACTGAACATCCACATGCGGCGCCACATGGGCGAGAAGCCGTTTAAATGTGATCTCTGCGAGATGCGATTTACAGTCTACTACGAGCTGAAGGTGCACCGCCGGAAGCATACGGGCGAAAGGCCCTATCAGTGCACCTTTTGTGCCAAGGAATTTGCGCGGCCGGACAAGCTGCGGCGTCATGTCTTCATGCACAACGCCAAGTCATAA
Protein Sequence: MTRTCRICGSADGRYWIETPVEKYAEKTFGQLLVELTRIEVAMAQAEKFPQWLCSACAQKLETTYDFVLQARQTHELWLRKLDDDDSADEMLGSEALEALRETPIHLFEIEGVTIKSEVLEPPKKMGRGVAAADPLVRSRFVKRTIVHFSDSDGGDQDDVPLRQRKVSVSPQPVVSAEEKHNICEVCNKAFRYVTNLYRHKQRDHGLPARPGEEIDDDDNYYKCDQCDKAYKYVMALVKHKHAEHGASLLPAKTSRRKMPGRPSVMPGDGSPSSPASTSGTSTQRSRGNTDALVHSIIKAVELSDEDGNCSADNYYKCNQCSKSYKYIVSLIKHKHREHTDQDKKQSDSEDDLPLASTSAALASAASAAKPSRINRRVEDFDPHSCEPNGAKEIKCMICLRRFTKLRELRDHLHAHPTDFDFEAHGEPIERIAEGFFKTAVESTTEGLKRRIFRDLRLGVYGRYYSITNQARYEMNMDSSDTDSEGEGEEDVVLRRSYACELCDSLEARWPRKYLLHQHHRQEHSWLDAPYVCQRCDSRFLSAQLLEHHTSRLCQNTLKRFQCDKCPQRFFWRRNLRAHLVEHKSKQEYYSCDQCSRSFQDKSAVTKHKLMVHRDGNAQLIPCRWCTRTFYRPSLLYKHVQRHGFTGQDLPLAETLLADASKHTGQKSIQCKVCDTQFISVADLRRHIVMQGGDHSDQPSAYMISTEAGFELLLEDTDESDEESYSASRTYSCDLCDLSFRRRREMSEHQYSLHSFDKLPHSCEHCIFKTVDKSLLDQHLSRQCRNSDKKFICPRCGYKFMWEENLALHLATQHSKQTPTPENQPPSRRKRRFRYQCPHCWRSFVVQPSLEKHIRDMHVAKKNPGKKYLCSLCGLEALTPNKLNIHMRRHMGEKPFKCDLCEMRFTVYYELKVHRRKHTGERPYQCTFCAKEFARPDKLRRHVFMHNAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00548234;
90% Identity: iTF_00524559;
80% Identity: -