Basic Information

Gene Symbol
Trerf1
Assembly
GCA_018151085.1
Location
JAECWH010000829.1:1316745-1328144[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.2e-10 1e-06 28.8 0.1 2 45 1450 1493 1449 1494 0.94

Sequence Information

Coding Sequence
ATGCCCACCGAGAATGATATTTGCTGCAAAATCTTTGGAAATGCTTCGGCGTTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATTTGCGCGCTCTGCTCTAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACTCATAGGAATAAGAAACCTTACGAATGTAAGGCAGATGGCTGTGGAAAATCCTACTGTGATGCTCGCTCATTGAGACGTCATTCGGAGAATCATCATACTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTACACTTAGCCTGTCACCGGCCACAGCCAGCGGAGATGCCAGCTCTCCAGATGGTGCCACCTGTATACGCACTTACATTTCCACCGGCAGCTCTGTGGTCGATGCAGCTACAGGCATCGCCCTTTCCGAGGAGCAAATCAAGGCCATGAACTTGCCGATTAAGACCGGAGTGACGCTTCTCTCGCCCACCACATCGACATCCTCGATTGCCTCGTCCAGCGCTTCATCATCAACGTCGTCGTCGTCATTGGCATTAGTGTCGGCATCCTCGACAACAGCCATGTCTCCATCCTCGGGACCGGGCACACTAATTGCCAGTTCGCCAACCATTACCCTTGCTGATGGCAGTAGTCTAGAGGGAGAGGGTCTGACACGCGAACAACTGGATCTCATTAGCAAGATAATGCAACAGACAAAGCAAACGAGTGCCCAGGTGACTGTGTCCTCGCCCACCAGCATTAGCTCCTACAAAATCAATACAAACTCAGCGCCAACACAATCCAGGCCACGCACTTGGAACATGCAATTGCTCAACAATTCGCAGAATGTCACTGTCACCGTTGAGGATGGTACAGATTTGGTTCCTTCATCATCATCCTCCTCCAGTTCGCCCGTTGAGGTTAAAGAGGAGGAACTCAGTCCGCAGCTGGTGGCGGCCATCAATCCGCATCTGTTGAATATTGTCAAGCTGGACAAGCCAGTCGAGTGCAATTTGTGTCACCGAAAGTTCAAAAACATACCTGCCCTCAATGGGCATATGCGTTTGCATGGCGGCTACTTTAAAAAGGATGCCGAAAGCAAACGCAACGAGAAAAAGGATTCTAATGGACCGCCACTGCAGACAGCCAGTATTGGGGTACGAGCCCTGATCGAGGAGAAGATTATAAGCAAGCGCAAGGATATAAATAAGGGTTCGTTTGTGGTCCCCGCCCCGCCAAATAGTAATTGCGCTACAACTACATTGAGACGTTCGATCAGTGATCTGGAGAGTTTTCTCAATCCCAAGAGTAATGCGAACAGTATAAATAATGCCACGCCCACCACTACAACCGTTTTGCCAGCTGCCACCACAATTAAGAGCAGCAATGGTCTGAGTATACAACAAATTGGACTGCCGCAGAGTATTGAGATCTTCAGCGGTGGCCAGAAGCAATCGAAAACGTTAAATCTAGGCGGTGGTAGCAATACGATAACCATAACCACCAACAATGTGCCCACCACAACCACAATGAGTGCGTTGACAGCTCTGAAAGCTGGCGGCACATTCAGCGGAGTATCAGCGTCGACATCCACCAATACGGATCCGAAGGATTCCACTTTGATTGAGCTACTTAAGAGAGGGACACGCATTGCGGTGACTTCAAAGAAATCATCCCAAACATCCCACACACAAATGCAGGCCCAGATGCAGACACAAACTGTTGGCGGCCCTTTAGGCGGTGTGGGGACTGTTACCGAACTGACAGGAATCGGTTCAAATAGTCGCCAGATTATCACCAACAATAATCGCACTGTGATCATACCATCCGACGTCCAAGTTGTATCCACCAAGAGCAAACTGAACACCCTTTCGAGTCTTGTGAGGGCCAGCAGCAACATTGGGGGCGGAAACACTATAGGCAATGGCACCAACAACATTTCATGTCCAACTAATAGCATTTCCCTACCGGATGGTACACCATTGTCTTTGACAATTGCTCCCAACCAAGAGGGCACAAGCACTTTGACAGGAGCCCCAACTGGCGGTGTTATTACCAGCGGAGGTAATGGTGTCTACACTGTGACTTATACCAGCGATGGAACCGATCTCTTCGATGATGCCGAAGTCTATAATGTTACCGACACAGAGATGCTCCTGCAGACAGTTGATACCATGGAGTTGCTCAATAACGATGAGGATGAGGACGAAGATGCCCAGATGAAGAGCGAACATTCCGAAGAGTTTGCCCTACTCAGCGAGGCCGGCGATAGTGCGCATACGCAGCTGGTCAAGCTGGAGGCAGACAATACAAATAATGGGACAACAACCACAACAACAACAACGGCGCTGCCCACCTTCCAGCAATTCCATTCCAAGGAGCTAATCATGCAGAATAGCTCACAGATCCAAGCCATAGCCAGCATGCGTGTTGGCAGTGTTCTGACATCGCCGATACACTCACCATTGGCCTATCCCACACCACCGTCTAGCCATGAGAATATGGCCCAATCTTCGCCGTTCATAGAGGATGCAGCTGCCCAGTTTGTGGATGCTACACACACTTTCTTTGGCGATAAAACGGACTTTTCGCACATCTATTTCAAGACCGACGATGGCCAAGAGACCCATGAGCAACTGAGTGCCAACGACAATGAAAAGATTCTCAAGTTGAAATCTGTGCTGGAGGAGAGCAGTTTTGATCCATCGATTAAAGTAGAAGATCTACTGAATGGCACCGAAGATGATACCGAGTGTGATTTGCGTGAATTCGCCGAGACGAATCTCTCGTTTCTTGACGAGGATCAAGAGTTTCTCAATGATTCGCGTAATGCCACCTCGCCCCTCTCTGAGTCGTTTTTCACCAGCGGCATTGGTTCAGCAGAGGATGTAAAGCAAGTGTTGCGTGAGGTGTTGCCCGATGAGAATATGCAATTGCAATTGTCAAGCGAGCAACAGGGTGAGAATATTATCGATCTCTACTATTTGCCTGGCTTGGCTCTTCAATCGCAGATGATGCCCAATTCCGAGGATCCATTGTTGTCGTCGTCACCGCGTGAATTTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGATTTCATTATGCCCTTGGTTAGTGGTCAAAATTTTGCTCCTGTTGCCAATCAACCGCAATTTTTGGATACCAATCAACAGTCAATGACCCTGAATAGTATCCTGCAACCATTGCTCTATTGCGGTAATTCCGTCAATGGCAATGGCAATGATTCCATGCTAGTAACAGACTGCCAAACGAATGCATCACAGCCACAAAACGGCCTGGAGGCAAGTCTGCTCTTCACCTGCGGCTCCACAACTATTGTCAACAACAACATTAACACCAACAATAACACCAGCAACAGTATGAGCAACTGTAATTCCACTCTGGGCAGAACTCTATTGGGCACACTGCCACCCACATTAATGCCAGCACCACTTCCACCAGGCGTATCAAACTTACAGCCCTTGTCGAACCAAACGAATTCCATACTAAAACGTCGCCTACGCTCGAACGTATCGCAGGAAACACACAAATTCTCCAAATTCCATACCCTTTCACCGCATCGTTCCAAGTTGCGGAAACCATCGCGTACCCATTATACACCGGCACCCATGCTCAATCCGGACCGTAAGGGAACCGGACTCTATTGCAATGTTCGCAAGCAAATGGGTCAGAATTCGATGTTTGATGGATTCGACGATGATTTCGGTGATCCGGTGGGCTTAGTTGATTTCTCTGACGAGTCAAAGGTGAATTTGGGCTCAACATATCAGGCTCAGATACCCGCCTGTAAGCCATTCGAGGAGGCGGCCCACGATACACTTGGTGCTGAAATGATGTGGGATCCCGATATACAGGAAGACGAGAAAATACTAATGCGCTATATAGATCTGAGTAAATCATCAGCCGTTCCCATGGGCAGTCATTCCGAGGAGGTTGCTCTGCAAACTTTACTCAAATCGAAGGGAAATTCGGCAGCGGCTGTCCTCATTCTGCTTCAGACGCAGTCCAATGCATTCCAAATGAAATGGACAGCCATCGAGTTGGAGCGTTTTCTGCGTGGTCTGGAAAAGCATGGCAAGAATTTTGGCAAAATTGCCAATGAGCTTGTCACCAAAACATCTGGCGATTGTGTGCAAATGTATTATTTCTGGAAGAAACTCTGCGTCGATTATAAAGTGTCACATTTGAAAATGGAACCGGTTGCCCATAGCACACCAGCCATAGAGAAGCCCTATGTATGCGAAATAGCTGATTGTTCGGCGAGCTTTACTTCGAAAGCGGCGCTGCACGGTCATGTACGCATACACGCTTATGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACGGTGAATTCCCCTGCAAGGTGTGCGGCAAAGTCTTCAATAAGGTCAAGAGTCGTAGTGCTCATATGAAAACGCATCGTGTACAGGAGCAGGATAATCAATCAGCCAATACTAAACAGCAACAGTTGAATCCAATTCCAGTAGCAGCCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCATAGCGATTATCACAACATCGTCGTCATAG
Protein Sequence
MPTENDICCKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKADGCGKSYCDARSLRRHSENHHTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLSLSPATASGDASSPDGATCIRTYISTGSSVVDAATGIALSEEQIKAMNLPIKTGVTLLSPTTSTSSIASSSASSSTSSSSLALVSASSTTAMSPSSGPGTLIASSPTITLADGSSLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSISSYKINTNSAPTQSRPRTWNMQLLNNSQNVTVTVEDGTDLVPSSSSSSSSPVEVKEEELSPQLVAAINPHLLNIVKLDKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAESKRNEKKDSNGPPLQTASIGVRALIEEKIISKRKDINKGSFVVPAPPNSNCATTTLRRSISDLESFLNPKSNANSINNATPTTTTVLPAATTIKSSNGLSIQQIGLPQSIEIFSGGQKQSKTLNLGGGSNTITITTNNVPTTTTMSALTALKAGGTFSGVSASTSTNTDPKDSTLIELLKRGTRIAVTSKKSSQTSHTQMQAQMQTQTVGGPLGGVGTVTELTGIGSNSRQIITNNNRTVIIPSDVQVVSTKSKLNTLSSLVRASSNIGGGNTIGNGTNNISCPTNSISLPDGTPLSLTIAPNQEGTSTLTGAPTGGVITSGGNGVYTVTYTSDGTDLFDDAEVYNVTDTEMLLQTVDTMELLNNDEDEDEDAQMKSEHSEEFALLSEAGDSAHTQLVKLEADNTNNGTTTTTTTTALPTFQQFHSKELIMQNSSQIQAIASMRVGSVLTSPIHSPLAYPTPPSSHENMAQSSPFIEDAAAQFVDATHTFFGDKTDFSHIYFKTDDGQETHEQLSANDNEKILKLKSVLEESSFDPSIKVEDLLNGTEDDTECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEDVKQVLREVLPDENMQLQLSSEQQGENIIDLYYLPGLALQSQMMPNSEDPLLSSSPREFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDFIMPLVSGQNFAPVANQPQFLDTNQQSMTLNSILQPLLYCGNSVNGNGNDSMLVTDCQTNASQPQNGLEASLLFTCGSTTIVNNNINTNNNTSNSMSNCNSTLGRTLLGTLPPTLMPAPLPPGVSNLQPLSNQTNSILKRRLRSNVSQETHKFSKFHTLSPHRSKLRKPSRTHYTPAPMLNPDRKGTGLYCNVRKQMGQNSMFDGFDDDFGDPVGLVDFSDESKVNLGSTYQAQIPACKPFEEAAHDTLGAEMMWDPDIQEDEKILMRYIDLSKSSAVPMGSHSEEVALQTLLKSKGNSAAAVLILLQTQSNAFQMKWTAIELERFLRGLEKHGKNFGKIANELVTKTSGDCVQMYYFWKKLCVDYKVSHLKMEPVAHSTPAIEKPYVCEIADCSASFTSKAALHGHVRIHAYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGEFPCKVCGKVFNKVKSRSAHMKTHRVQEQDNQSANTKQQQLNPIPVAATXXXXXXXXXXXXXXXXXXXTIAIITTSSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2