Dtrs009831.1
Basic Information
- Insect
- Drosophila tristis
- Gene Symbol
- -
- Assembly
- GCA_018150885.1
- Location
- JAECWT010000215.1:3836682-3841974[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-10 6.1e-07 28.7 0.0 8 69 413 468 409 473 0.83
Sequence Information
- Coding Sequence
- ATGAGCTCTCCCGATGAACCTGGCCCTTCAAATGGACGTAAGTCCCGATCGAAGCGGCGGGATAAGTCCGTGTCCCGAAGCAGTAATTCCAGTAGTGGGTCAAACTTTGGACGACATAGTAGTAACGTCGTCAACGGGGGAAGCTTGAGAGACCGATTGCTGGTGGCTAACGCCATGGCCACTGATGAAACAAACAGCATGGTGAATGGCAACGATAAAAACCAGAGGAAGAAGAAAAAGAAGAAGTCAAGTCGACGCAAGTCACAAACAGGATTGAAGGGATATTCCGGAAGAAATCCTTCCCTTTCGTATTTACAGAACGAAATCTCTGATGACTCCGATGAAGATACTCGGTCGCCAGCTGAAATCAGGGCGCTTTGCACGAGTGGTCTGAGGGTATTCCCCCGTGAACAACAGACAGAATCAACGGCAGACTCAGCAGTACAGGCCGCAGCTCCTGATGCTCCGGCTGATCCGGCTAGCCCGGACACGGACACTCCGACTTCTTCACAGATGTCATCATCACCATCACCATTCTCCCGCACGGAGCAGACGAAGACAACTATACAACTCCCGACAGCAACAGAACCACCCCAACCTTCCATCCAACTAACAACGACAACTACCACTCCGACCACAGGAATTTCAACTAGCACCATCCCAGCAACGTCCTCCTGTACTAATTTAATGACTCCAGTATCGTCTGCATCACCAGTAACAACCCTTCAGTCTCCGACAACTCCTCCCAGCCCAACATTTTCACCGACGGCATCAGCCAACAACAACAACAGTAACCACTCCTCAGAGAACATCTCAAACCACTCTTCTGTGGCTTCAATCACAAGCGAAGCAGACCCAGAATCGCGAACAACAACCACAACAACAACAACTACAGCAACTGCAAGTCAGCAAACAGCAACAGATTTAGACAAGAAGGATGAGGTGATGATTCCTGTCACTGATTCCAGCCAATTGTCCCGAAAACGCCCAAAGTCGAGAATGGGAATTAAGACAAACGACGACAACGAGGAAAACAAGGAGAAGGTGTCAGCTGCATCGATTCCTTCTTCAAAGAAAAAGAAGAAGAATCAGACTCCTTGTGTTTTCATACCCAGAAAATTAATTTGTGGTGATGATCCGTTGCCCGATCCGTTGCCAGAGGTGTCCCATCGACGCAAAAGTACTTACTCTGATGCGGCCAAGAAGCCGAAGCCAAATTTGTCCGACGAGCTCTATCGTCTGCCGTTTAAATTTGGTTGGAAGCGTGAGGTGGTGACTCCCAGCCCACTGTCCAACACTTCGAATCACACAATCTACACATCGCCCTGCGGCAAGAAGTGCCGACAAATCAGTGATATTGTACCATTGCTGACGAATAAACTCACCGTCGAGCACTTTATCTTTGGGACGCATCTCCTGGGTGCCGGATCCGAGTTCGAGACGAGCCGTCAGGCCTTGAGCAGGGAGATGCACTATGCCGCTTTAAAGGAGCGCCGCCAAACGCTGGCGGCCGACAAATCGACAGCGTCGGTCACAATGAAGGTGGAGCGCAAACGTCGTCAAACGATGGGAGCCGAATCCTCTCCGAAGGAGGCACCTGCCTCTAAGGAATTCGGCAAACGTCGCAAATCCGTCAATCCAGCGGAGTCGGTCATCGAACCCAGTAAGCCGATGGCAGTCCAATCCACGAAACCTCTGGCAGGCGAAGTGGTGGCTCATGTAACAGGCAAACGCGTACCCAAGCCAAAGGTGCCAAAGGGCGCCAGCCCTCCCACTGTGGGTTGGACTTCCACTATGGCCGTCAAGGGAAATGCGCGCCTCCTGGCTGCCGCCAGCAATGGGAACGCCAGAGCTGCTGGATCTTCGAATGCAAGCGGCAGCTCAAATGTCGCCCCGATGAGCCATGCCAAGCGCGCCACCTGTGGATCCTGCCTAAAGCTCATCAAGGGTAGCGTTTGCCAGAGCTGCGTGCGGTCGTCGGCGAAGGAGGAGGGACCAAATGCTGGGCGCATGATGGACGAATATGAAGAACTGGAGGACGATGAAGATAGCGAAGAGAGCTACCAGGCGGGCACTGTGAGCAATGGGCTAAAAGTCACAAAAATGATCGAGCCGCCCGGCGAGATGCCCCCAGCGGAGCTATTCAGCACAGACAAATCCCCAGTGACAACGCCAACTGATTTATACATGCCCCAGGAGGTTGTGGTCATCGGTGGGCGTAAGGCGATTTCCATCGTTGGAGAACCAACGACCACAAGTCAACCCAAAGTCATTGTGCCAAATCCACCAGACTTGAGCAGCTACGAAGAATTCTACGGCAAACGCATTGCTGCACCCAAGAAATTGGCTTCACCCACTAGCCAGTGGGGAGCAGCGCTCGGAGAAGGCTTCAACTGTCATTTTTTGCTCAGCCTCATGAAGACACTCAATCAGCAAGATCGTGTCAATTGCTCGAATGTGTGCAAGTTGTGGCACTTGGGCTCCCGTGATGCTGATGTATGGAAATCAGTATCCCTGCGCGATACAAAGGTCAACAATTGGCCAGCTTTGGTGCGCGAGATGGCACGCAACTGCACACGTGATCTGGACATGATGGGTGCGATTATACCCAATACTGGGACCCTCATCGCCGGTGACATGAGTGTGCTAACAGATATGCGCACGGTGCGCACCAATGATACGAAAGCGGAATTTCTACACCAGATATTCAGTTGCTTGCCCCAACTTGAGAAGCTGATCGGCACATGCATCAGCTCGGGCATCATCATGACCAACATCGATAAGATGGAGAACCTGAATGAGCTGCGCATTCGAATGACCGATACCAAGGCATCGATCACCGGTCTGCCCCACGTGGGCAAGCTGACGCATCTGCGTGTCCTGAGTCTGCGCGGCGTCAAGAATTTGGGTAACTTGCTGTTCCTAAAGGAGTTGCCCAATCTGGAGACTCTCAACCTGGGCTACTGCCAGAGCATGCACCGTCTACAGCTGGCCAACGATGTGCTGCCGACACTCACAAAATTGCAGAGATTCCGCATAGAAACAGATCCGCGTAAGAAGACCTCGTTCCCAGTCGACGAGATCATGAAGGGACTCGCCCAAGCTGGTGGCGTGCGTCGCCTGGAGCTGGTCAACGTGGATGTAGACTCTAAATTTAGCCAATTGCTGTCCAACTGCAATACGGTGGAGGAGCTGCTGCTGATACCCAAATGCCAGAGCAACACGGCCATCATGATCCACTCCGTAATGGGAATCAGTCGTAATGGATCTCAGTTAAAGCAATTTAAGCTTGTGCTTATCACCCAGCTGCTTACCGCAACGGGCGCCATGTTGCGCAATCCCGATGTGCCCATGGTACCCGTAGTCCGTCCTATACCCGGTATACCGCTCGGCGATAGCTTGAACACCTGCTCCAAGGAATGTCGAGAGCTGAACCATGACACGTGTGTGGCCGGATTGCCCTTTGAGCGCCTACAGATTATAATGTCTGAGTTGATGCCGAATTCCTCACCGTCGGTGGTCACCATGGCCATGATGGAGACACCCACAATCCAACTTGGGCGTCTGCCACCTGATGCTAAGCCCCCAAACTTTTGA
- Protein Sequence
- MSSPDEPGPSNGRKSRSKRRDKSVSRSSNSSSGSNFGRHSSNVVNGGSLRDRLLVANAMATDETNSMVNGNDKNQRKKKKKKSSRRKSQTGLKGYSGRNPSLSYLQNEISDDSDEDTRSPAEIRALCTSGLRVFPREQQTESTADSAVQAAAPDAPADPASPDTDTPTSSQMSSSPSPFSRTEQTKTTIQLPTATEPPQPSIQLTTTTTTPTTGISTSTIPATSSCTNLMTPVSSASPVTTLQSPTTPPSPTFSPTASANNNNSNHSSENISNHSSVASITSEADPESRTTTTTTTTTATASQQTATDLDKKDEVMIPVTDSSQLSRKRPKSRMGIKTNDDNEENKEKVSAASIPSSKKKKKNQTPCVFIPRKLICGDDPLPDPLPEVSHRRKSTYSDAAKKPKPNLSDELYRLPFKFGWKREVVTPSPLSNTSNHTIYTSPCGKKCRQISDIVPLLTNKLTVEHFIFGTHLLGAGSEFETSRQALSREMHYAALKERRQTLAADKSTASVTMKVERKRRQTMGAESSPKEAPASKEFGKRRKSVNPAESVIEPSKPMAVQSTKPLAGEVVAHVTGKRVPKPKVPKGASPPTVGWTSTMAVKGNARLLAAASNGNARAAGSSNASGSSNVAPMSHAKRATCGSCLKLIKGSVCQSCVRSSAKEEGPNAGRMMDEYEELEDDEDSEESYQAGTVSNGLKVTKMIEPPGEMPPAELFSTDKSPVTTPTDLYMPQEVVVIGGRKAISIVGEPTTTSQPKVIVPNPPDLSSYEEFYGKRIAAPKKLASPTSQWGAALGEGFNCHFLLSLMKTLNQQDRVNCSNVCKLWHLGSRDADVWKSVSLRDTKVNNWPALVREMARNCTRDLDMMGAIIPNTGTLIAGDMSVLTDMRTVRTNDTKAEFLHQIFSCLPQLEKLIGTCISSGIIMTNIDKMENLNELRIRMTDTKASITGLPHVGKLTHLRVLSLRGVKNLGNLLFLKELPNLETLNLGYCQSMHRLQLANDVLPTLTKLQRFRIETDPRKKTSFPVDEIMKGLAQAGGVRRLELVNVDVDSKFSQLLSNCNTVEELLLIPKCQSNTAIMIHSVMGISRNGSQLKQFKLVLITQLLTATGAMLRNPDVPMVPVVRPIPGIPLGDSLNTCSKECRELNHDTCVAGLPFERLQIIMSELMPNSSPSVVTMAMMETPTIQLGRLPPDAKPPNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00563903; iTF_00603340; iTF_00474495;
- 90% Identity
- iTF_00474495; iTF_00563903;
- 80% Identity
- -