Dtrs006643.1
Basic Information
- Insect
- Drosophila tristis
- Gene Symbol
- bab1
- Assembly
- GCA_018150885.1
- Location
- JAECWT010000001.1:13177886-13179592[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.9e-18 1.3e-14 53.4 0.0 1 43 56 99 56 101 0.95 2 3 2.3 5e+03 -2.9 0.3 6 13 231 238 225 240 0.76 3 3 3.5 7.4e+03 -3.5 0.1 4 11 246 253 246 253 0.84
Sequence Information
- Coding Sequence
- ATGATGGAGAATTCGCATGCCTGGATGGGCGCCACCGCTGGCTCCACACTGGCAGCAGACAGCTACCAGTACCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACACCAATCAGAATCTGATGCATCACATGCGCTTCCGGGAGCGTGGACCCCTCAAGTCGTGGCGACCCGAAACGATGGCCGAGGCCATTTTCAGTGTGCTGAAGGAGGGGCTCTCCCTGTCGCAGGCGGCACGCAAGTACGACATACCCTATCCGACATTCGTGCTGTATGCGAATCGGGTGCACAATATGCTGGGACCCTCCATCGATGGCGGACCCGATCTGCGGCCCAAGGGACGTGGCCGGCCGCAGCGCATCCTTCTGGGCATTTGGCCGGACGAGCACATCAAGGGGGTGATCAAGACGGTGGTTTTTCGCGATGCCAAGGACATGAAAGACGACAGCCTAGGCGGCCACATGCCGCCCTACGGTCGTCACTCGGTACTTTTTTCACACTTTTCCGCATGGAACTATCCAGGCGCTAGTGGCGGCATTCCAGGGCCAGGAGCTGCTAGCCTCAGCGCTCTGGCCTGTCCCAATGGCATGGGCAGCGGTGGAGGCGGAGTCCCAGGACCCGGAGGAGGAGTCGGGGTCGGTATCGGAGGCGGCGTGGGTCCAGGCGTCGAGCAGCACATGTCGCAGGAAACAGCAGCCGCCGTTGCCGCCGTGGCGCACAACATACGACAGCAGATGCAGATGGCCGCCGCCGTGCAGCATCAGCACGGGGAGGCGGGGCCGCCGGTGGTGCCACCACCCGGACTGTTTAACCTGCCGCCACATCTGGCCAGCGGGCCACCCGGCAGCAGGGGCAGCATTTCCCCGGCGTTAAGCAGCGGTTCTGGGCCGCGACACGCTCCCTCGCCGTGCGGCCCCGCCGGCCTGCTGCCGAATCTGCCGCCCAGCATGGCCCATTCGCATTCGCACTCGCATCCGCATTCCCATTCACATTCGCATGGGGAGAAGCTGCTCCAAAAGAAGGGCAGTCCTCACCGCAGCGAAACGCCGCGCCTGCACTCGCCTCTGGGCGATTTGGGGCTCGAGATGTCCAGCTACAAGCGGGAGTTCTCGCCCAGCCGCCTCTTTGCCGACGATCTGGCGGAGCTGGTGGGCGCCAGCGTGTCCTCCACATCATCGGTGACGCAAGGCGCCGCAGGAGGAGGAAGTTCCGCGGCCATTGGAGAGGCTCCCAGCTCCAGTTCAAGCGGTGGCATCAAAGTGGAACCCATTACCACTAATAGCGAGTAG
- Protein Sequence
- MMENSHAWMGATAGSTLAADSYQYQLQSMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGPDLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKDMKDDSLGGHMPPYGRHSVLFSHFSAWNYPGASGGIPGPGAASLSALACPNGMGSGGGGVPGPGGGVGVGIGGGVGPGVEQHMSQETAAAVAAVAHNIRQQMQMAAAVQHQHGEAGPPVVPPPGLFNLPPHLASGPPGSRGSISPALSSGSGPRHAPSPCGPAGLLPNLPPSMAHSHSHSHPHSHSHSHGEKLLQKKGSPHRSETPRLHSPLGDLGLEMSSYKREFSPSRLFADDLAELVGASVSSTSSVTQGAAGGGSSAAIGEAPSSSSSGGIKVEPITTNSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580639;
- 90% Identity
- -
- 80% Identity
- -