Dtrs014094.1
Basic Information
- Insect
- Drosophila tristis
- Gene Symbol
- -
- Assembly
- GCA_018150885.1
- Location
- JAECWT010000117.1:1531838-1536343[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.5e-12 1.2e-08 34.3 0.0 1 40 451 491 451 494 0.90 2 4 3e-14 6.5e-11 41.5 0.1 2 39 506 543 505 546 0.94 3 4 7e-18 1.5e-14 53.2 0.0 1 45 560 605 560 605 0.98 4 4 7.1e-20 1.5e-16 59.5 0.0 1 43 612 655 612 656 0.97
Sequence Information
- Coding Sequence
- ATGGCGAAAGTGTTGTTGGAACTGGGCTGTGCTTTGGATGGACACCACTGCGGACTGTGGACACTGGGCCTCTTGCGCACCGCCGAACAACTGAAGATCAAAGGCCTCTGCGAGACAGCGGAAAACGCGGATGATTTGAACGACGCGGCCACAGCGACAATAACCGTGTCGGAGAACATCCAGCAGGCGGTCGTGGGGAGCATTCTGCTTAGCACGACAGCGAGTGGGAGCAGCGGCAGTGGAGCAGGCAGTCTCCAGTCGCATTCCGGGCTCCAGCCGACGACGCGCAAGTCGCGACTAAAGCGGTCCAAGTCTCCGGATCTGCAGTTGAGCGGAGGCAACGGTAACGGCAGCGGCAGCAGCGTATCCCAGCAGCCACAGCCGGCCCATCACCACTCGCAGACGCTGCTCATTCAGGGCCAGAACCAGACCTCCATTGTGAGCCTACAGCAGACGGCCGAGGGCAATTATATACCCGTGCCGGGCACCGGTGACGAGTCGGACGTGGATCACGATCAGGATCACGATCACGATCACGACCACTCCCACGACCACTCCCACGATCTATCACACTCCCACGACCACGAGCACGAGCACGAGCACGAGAGCAAGCCGAGCAAGATCTGCAAGACAGAGCAATCGCTCGCCTCGCCGTCGTCAAACTCGTCCAGCCACTCGAACAATGCAACGGGCGTGAGCGGCGGAGTGACCTCAGCGGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTTACGGAGCACGTCGACCTCTCGTGCAACCCCAGTACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCACCTGGCGCAACAGATCCATCGACTCGATCAATCTCCCATGCATTCGATAGCCCATCATCACACCGGGGACGAGAGCAACTCGAACCTGGTGCAGCACATCAAGAGCGAGCATGGTGGGCATGTGTCGCACGCGGAGATCAGCGGGGCAACTGTCATGGAGATTGATCCGAGCCAAATCAAGCACGAGCCTGGGATGATTATAACGCCGGAGATTGTCAATATGATGTCCTCAGGGCATATGGATATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAATGGCTCGCCGCACGATCAGAAGGAGCCGCACTACACGAACTTGGATCAGCAGCATGGAGGCGGGCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATCCCATCGACCACCCTCTGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAACGCCTTGGAGGCGTTGCGCTCGGGCCAGATATCCGCCAATAAGGCATCGAAAGCCTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGTGAGGGCATCCGCCTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATCCGGGCGGGTAATACCTCTGTACAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCCACTCCATGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCAGTGCGGGTTGGCCAAATGTCCATCAACCAGGCGGCCATCCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGGGGCAAGTACGATGTTGTGGCCAACACTAGCGGCGTGTCGCTGATGAACACCTCGGGCAACACCACGGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCATCGCCGCATCCGCCAACGCCCCAGCATCATAGCACACCGCAGCATCACAGCTCGTCCCAGGGGCCGCCAACGCCGCAGCATATGCAACAGCATGTGCGTAGTTGA
- Protein Sequence
- MAKVLLELGCALDGHHCGLWTLGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGSILLSTTASGSSGSGAGSLQSHSGLQPTTRKSRLKRSKSPDLQLSGGNGNGSGSSVSQQPQPAHHHSQTLLIQGQNQTSIVSLQQTAEGNYIPVPGTGDESDVDHDQDHDHDHDHSHDHSHDLSHSHDHEHEHEHESKPSKICKTEQSLASPSSNSSSHSNNATGVSGGVTSAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEHGGHVSHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSSQGPPTPQHMQQHVRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00474424;
- 90% Identity
- iTF_00484364;
- 80% Identity
- -