Dtri009106.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila tripunctata
Gene Symbol
-
Assembly
GCA_035047385.1
Location
JAWNPS010000225.1:145306-154276[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.0012 0.082 13.5 3.7 1 21 311 331 311 333 0.94
2 20 9.4e-06 0.00064 20.1 0.4 1 23 339 361 339 361 0.97
3 20 0.0014 0.094 13.3 0.9 1 23 367 389 367 389 0.95
4 20 2e-05 0.0013 19.1 3.1 1 23 395 417 395 417 0.97
5 20 4.5e-05 0.0031 18.0 4.7 1 23 423 445 423 445 0.99
6 20 8.3e-05 0.0056 17.1 5.7 1 23 451 473 451 473 0.97
7 20 4.1e-07 2.7e-05 24.4 4.3 1 23 479 501 479 501 0.98
8 20 1.5e-07 9.8e-06 25.8 2.4 1 23 507 529 507 529 0.97
9 20 1.4e-05 0.00097 19.5 4.5 1 23 536 558 536 558 0.97
10 20 0.00057 0.039 14.5 5.0 1 23 564 586 564 586 0.97
11 20 8.5e-05 0.0057 17.1 6.7 1 23 592 614 592 614 0.97
12 20 0.00015 0.01 16.3 6.5 1 23 620 642 620 642 0.98
13 20 1.3e-05 0.00089 19.6 4.5 1 23 648 670 648 670 0.98
14 20 9.5e-06 0.00064 20.1 8.1 1 23 676 698 676 698 0.98
15 20 7.4e-06 0.0005 20.4 7.8 1 23 704 726 704 726 0.97
16 20 8.7e-07 5.9e-05 23.4 7.7 1 23 732 754 732 754 0.98
17 20 0.00027 0.018 15.5 9.5 1 23 760 783 760 783 0.95
18 20 9.6e-05 0.0065 16.9 0.9 1 23 789 811 789 811 0.98
19 20 0.0011 0.071 13.7 3.4 1 23 821 843 821 843 0.97
20 20 1.2e-05 0.00081 19.8 1.6 1 23 849 872 849 872 0.96

Sequence Information

Coding Sequence
ATGCAGCACGTGAACGCTGTAAGTTCTACACCTGCGGTGGTATCAACGCCATCCTCGGTGGTGACCACTGGCCCTGGtggcaccaccaccatcacatTGGGCAGTGGACCTCCCCCAATATCTTTGACAAACAAACTAATtgaacatcatcatcatcagcagcagcagcagcatcaacagcagcagcagcatcattcacatcaccatcatcatcaactgcagcaacaacagcagcaacaacaacaacaacaacataatcaCAACAGCAAGGAGGACGGAGCTGTTAAGCCACACGGCTTGGAAATGTATAAAGTGAACATTGAGGATATATCGCAGCTATTTACGTATCACGAAGTATTTGGTAAAATCCATGGCGATGTGGTGAATCATGTGGCAGCGGTGCACGGTGGCGGCGGAGGAGGTGGTGGCAGTGGTCaattgccaccgccaccgcaattgccgccaccaccgcccTTGCCACCGCAGACGACGCATGCAACGGCAagcgcagcagctgcagcagcagcggcggcgtcCACAAATAATGCAGCCGTTGCTGCCGTCATGGCCTCTGCCAatgcagcagcggcggcagcagcagccgcttcggcggcggcaacagcacagcagcaacaacagcagcagcaacaacaacagcagcaacagcaacaacaacaacagcagcagcagcaacaacaacaacagcaagcagtGACAAATGCGGGAAGCCAGCAGGGCAGCGCCACGGTGACCACGACTAGCTCagcaacaacaggtggcggcggcggtgttGGTGTCGGTGGCGTTGGCGGTGGTGAACAACTGCTAATGCCCAAAATGGAGGGCGGCATTCACAATAATGTGGATGGCTCAACATCCGCATCGAGCATAGCGTTGGCGCCGGATGGCACACCGATTGCGACTGGTACGCATGTATGCGATATTTGTggcaaaatgtttcaatttcgTTATCAATTGATTGTGCACCGTCGCTGCCACAGCGAGCGTAAGCCATTTATGTGTCAGGTATGCGGTCAGGGCTTTACCACATCCCAGGATTTAACCCGTCATGGTAAAATCCATATTGGCGGTCCCATGTTCACCTGCATCGTCTGCTTCAATGTCTTTGCGAACAACACCAGCTTGGAGCGACACATGAAACGGCATTCGACGGACAAACCATTTGCCTGCACCATTTGCCAAAAGACCTTCGCACGCAAAGAGCATTTGGATAATCATTTTCGATCGCATACTGGCGAAACGCCGTTCCGTTGCCAGTATTGTGCCAAGACGTTTACACGCAAGGAGCATATGGTTAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCATTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGTGGCAAGAAATACACCCGAAAGGAGCATCTAGCCAACCATATGCGATCCCACACTAACGAGACGCCGTTCCGTTGCGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGATTTCTGCTCTAAGACGTTCACACGCAAGgagaatttattaaatcatGTGCGACAGCACACGGGAGAGTCACCGCATCGCTGCTCCTACTGCATTAAGACGTTCACACGCAAGGAGCATCTGGTGAATCATATACTCCAGCACACGGGCGAGACGCCGCATCGTTGCGATTTCTGCTCCAAGACGTTTACACGCAAGGAACATTTGTTAAATCACGTGCGACAGCATACGGGAGAGTCACCGCATCGCTGCTCCTACTGCATGAAGACGTTCACACGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACACGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACGTACTGCACGAAGACGTTCACACGCAAGGAGCATTTGACGAATCATGTGCGCCAGCACACGGGCGATTCGCCGCATCGTTGCACCTATTGCAAGAAGACGTTCACACGGAAGGAGCATCTGACGAATCATGTACGATTGCACACTGGAGATTCGCCGCACAAGTGCGAATATTGCCAGAAGACGTTCACACGCAAGGAGCATCTCAATAATCATATGCGTCAGCATTCAAGCGACAATCCCCATTGCTGCAATGTGTGCAACAAGCCCTTCACCCGCAAGGAGCATCTGATCAATCATATGTCACGCTGTCACACCGGCGATCGCCCCTTCACCTGTGAGACATGCGGCAAATCCTTCCCCCTCAAGGGCAATCTACTTTTCCATCAACGCAGCCACACCAAGGGACAGGAGTGTGAACGTCCGTTTGCTTGCGAAAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTGTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCATTCGTTGAGCGGGGCAATTTGAAGCGCCACATGAAGATGAATCATCCGGATGCTATGATGCCGCCACCACCCATACATCCGCATCCCCAGATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCGCATCACTCGACGACGACCACAATGCACACCATACAGCAGATAACGGCTGGTGCTGCGGCAGCCGGGGCCGGTGCTTTGCAGGTGACACCCGGCTTGGTGCCACTGGTGCCACTCATCGCCTCCCACAATGCCCAGCAAAcgcagaagcaacagcaggcggcggcagcagcagttgctgcccAACAacaagcggcagcagcagcagcggcccAACAGCAAgcggccgcagcagcagcggcacagCAACAGGCGGCGGCAGTGGCCcatcaacagcatcagcaacaggttgcggcacagcagcaacaacagcaacagcaggccGCTGTGGCTgcacatcagcagcagcaacagcaattgcagcagcaacaattgctacAATTGTCCATACAACAGGcagctcatcatcatcagcaacatcagcagcagcagcagcaacaacagcagcagcagcaacaccatcagcagcaacaacaacaggcacaCCCACAGGCAccgccacagcaacaacaacagcagcaacagccaccGCCTCAAGTGCCCATCGCCCTGATAAGTGATCCAAGCGCCTTGGCTCGGGCAgcaatgcaactgcaacatctGCCCACCAATGTGGAGCAACATCCGGTGGTTTACTAA
Protein Sequence
MQHVNAVSSTPAVVSTPSSVVTTGPGGTTTITLGSGPPPISLTNKLIEHHHHQQQQQHQQQQQHHSHHHHHQLQQQQQQQQQQQHNHNSKEDGAVKPHGLEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGGGGGGGGSGQLPPPPQLPPPPPLPPQTTHATASAAAAAAAAASTNNAAVAAVMASANAAAAAAAAASAAATAQQQQQQQQQQQQQQQQQQQQQQQQQQQQAVTNAGSQQGSATVTTTSSATTGGGGGVGVGGVGGGEQLLMPKMEGGIHNNVDGSTSASSIALAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRCHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKENLLNHVRQHTGESPHRCSYCIKTFTRKEHLVNHILQHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPIHPHPQIPAGVLTQVKQEVKPIIIPHHSTTTTMHTIQQITAGAAAAGAGALQVTPGLVPLVPLIASHNAQQTQKQQQAAAAAVAAQQQAAAAAAAQQQAAAAAAAQQQAAAVAHQQHQQQVAAQQQQQQQQAAVAAHQQQQQQLQQQQLLQLSIQQAAHHHQQHQQQQQQQQQQQQHHQQQQQQAHPQAPPQQQQQQQQPPPQVPIALISDPSALARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00560429;
90% Identity
-
80% Identity
-