Dtri009107.1
Basic Information
- Insect
- Drosophila trichaetosa
- Gene Symbol
- -
- Assembly
- GCA_035043205.1
- Location
- JAWNNE010000315.1:3776973-3783421[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.051 3.4 8.3 0.2 1 23 1373 1396 1373 1396 0.94 2 13 4.7 3.1e+02 2.1 0.2 1 23 1566 1588 1566 1588 0.91 3 13 0.00019 0.012 16.0 2.7 2 23 1591 1612 1591 1612 0.97 4 13 7.2e-05 0.0048 17.3 0.2 3 23 1620 1640 1618 1640 0.98 5 13 6e-07 4e-05 23.8 4.1 2 23 1647 1668 1646 1668 0.97 6 13 5.7 3.8e+02 1.9 0.4 5 23 1681 1699 1679 1699 0.96 7 13 1.4 93 3.8 5.4 3 23 1706 1727 1704 1727 0.93 8 13 0.15 9.9 6.8 0.2 2 23 1738 1758 1737 1758 0.96 9 13 5.7e-05 0.0038 17.6 0.4 1 19 1764 1782 1764 1786 0.95 10 13 1.6e-05 0.0011 19.3 0.5 1 23 1794 1816 1794 1816 0.98 11 13 0.00011 0.0071 16.7 7.6 1 23 1822 1844 1822 1845 0.96 12 13 0.00021 0.014 15.8 5.9 1 23 1850 1872 1850 1872 0.98 13 13 0.03 2 9.1 8.2 1 23 1878 1900 1878 1901 0.95
Sequence Information
- Coding Sequence
- atggtgGACAGTGTGCAGTGCCCCGTATGCACCTTGTATCTGCATGCGGGAATGAATCTCTCCGATCACTTGGAGACACATCCCAAGGAGCAGGTCATCAAGGCACTGGTGAAAATGACCattgctggcaacaacaatggtggTCTGGACAGCGCCCTGGCGGCAGCTGTCATCtccagcagcagtcgcagcagcgtTGCCTCAACCGAAAGCGTTGCCTCAACGCCGCCCGCTGGTGATGTCAAGCCAGATGTGGCGTCAGTaccaacagcgacagcaacacaaCCACCACAGCCGCCACAACTACCccaaccaccacaaccaccccaaccaccaccaccaccagcaacaacaacagcagcagcatcaacaacaagcacatcGCAATCACCAGCATCCAAAGCTGTCGCATTGCTGgacaacgccagcagcagtagcaacatcaacagtagcaacagcaccagcggcagcaacaataataacaaattgagCAATCCACCGATTAAGGCAGTTAAGAGTGCGCCACCCACGACTGAGGCGCCAGCCACCacatccaacaacaacacacccACCATAAGCAGCGTGGCTGCTGTCTATCCGGCAACCCTGGCAACCGACTATCGCtacgaacagcagcaacagccacagcaacagcaacagctgcatgGCTTTCCACGTGGCACCACCACTACACTGGTGATACCACAAGCGCCGCCGCAACAGCACCACAATTTTCTGGGCAACCAACAGCCGCCTGCGCAGTTTgcccatcagcaacagcagccgcagtcgaCCATGAAGTTCACgtatgcaacagcagcgttgCCTCCGCCTCCCTTGCAGCTTTTTGCACAGCAGCCGACGGCAACGCAGCCGCATCAGAAGCCTCCACCCGCCTATGGCACCGCCATCAGTCAAATTCGATCTCAGCATAaccaaaacaagcaacaacaccaacaccaccaacaacaacagcaacaacaacacataaaCGTACAGCAgcacaatgcaaatgcagcaccACCGAGTggcaagcaacaacacaacagcaaaatccATGCGGATATCTTTCTGAATCCACCTCCACCGCCACAGCTCACAATTCCATCGTCGGCGTCGGtgtcatcgttgtcgttgtcgctgtccCTGTCGTCATCGACCTCCTCAAGACTGCAACATCcccaacaacaccaccaacaatcCCATGCtgctagcagcagcaactatgcAGCCACCAGCTGCGCTCCCAGCTCCTCGGTTGCACTAATGTCCGGGTCACCGTCGGCACGCACCAGCAGTCGCCAGTCAAGCAATTCGCCCTTTGGTGCCCTACTGAATGCGGCTGCGCACGCTGCCTGCTCCTCGCCCGCTTCGACTGGGGCGTCTGTGCTGCGCTTTGCCGAGTCGCCAGTGGCCCACTATCTGGAGCGGGAGAACGGTGATTTCATAGTGCAGGAGACGCCCAAGCATATCGTGGAGTGTGTCGAGAAGGACGACGGTGAGTTCTCCGTGATTGAGCGCATCTATCAGTCGCCACCCAGCGTTCTTCACATACACGACGATGacgaagaagaggaagaggaggaggaggacgacgATGATCAGCAGGGttGGGCAAACAGCGATGAGGAAGATCACGTCAAGGTGCCACACGAGCATGTCGAGGATGGCGATGATGAGCACGAGGATAGTCGCAGTCGAGTTGCATGCAAAACGACAACGAAAAAGTCACGCAAGACAAAAACGAGTGGCAGATTGCACAAGCGCACCTCCAAGCATCAGCTGGCCACGACGACGGAGGACGAGGACGACTTCATGAGCATAGGCAGCAGTTGTGCCGAAAGCGAGCATCATccagaggagcagcagcagcagcagcagcatgcgcAGCATGTATCGTCGGCTGGGGGGACAGCACAATTGGCGGCGAGTTCGTCGCCAGCTCAACTTTGCACTGCGCCCTCCACAAGcagtggtgctgctgttgctgttgctgctgccgccgccagtAGTGGCAAATTCATGGCCAGCGGCACCATCAAGTCCAAAAAGAATCGGGTAACGGTGCTTAGCGATGTGCCGCTCAACATGAACGAGTATCTGGATCTGGTGGGCAACATTGTCGCCTCGAGTCGCATTGGCGCAGCACGTCCGTTTGCCGCTGTGGCGCCCATACCGCTCGTCAAGGTTGAAAAGGAGGAACCCATGGATGAATATGATGCCGTTGAAGTCGAGATGCAGTTGGAGCAGAAGCCTAGCCTGGAGCatgccagcggcagcagtagtagcagcagcagtagcagcaacagtagcagcagcagcagcagtggacATGGCACCACCAGCGTGATACGCATGGCTAGCACCAGTGGCGCGAACGTTGCCGCCGAGGATCTCACACAGCCGCCGCCCATGAAGGTGGAGGTGGAGCCAACGGCGCTGCTGCCGCAACGCTTCTCGGCACCGGGGCAGCTGCGTGGACCCAAGAAATTAGTCATCAAACCAAAGGCcacagcgacggcgacgtcaACGACGAAAAAGACTGAGaacaacgctgctgctgttgctactggcagcaacagtagcagttGCGCCGCATCCCACAGCATATCAGTGACTACGCCCGCCGAGCTAGTACAGATCAAGAGCGAGAACGTGGAGGCGTCCACAtccagcagtggcagcataTTGGAAAAGCATCTGACTACCAGCTATGCGGCACAGCAAGCGGCACGCAAGCACTCCGCCGTCAACGATGACGATGCACGTGTCCTGCTCGAGTTTGCCAACTCGAAGCAGCTGCCGATGCCCGGCAATAGCAATCATACCACGTTTGTGGTGAACGCGGCCAGTTTTGCGTCAGCGGGTTCCGTATttgccagcggcagcagcggtgTCAATGTGCAAAAGTCAACCAAGCCGGGTTGTGGCGATGAGTACATTTTACCCGATGACACCAAACTGGAGGTGGATGAAATTGTGATATCCTCATCGTCTTCCTATGCCTCCAcctcgcagcaacagcagcagcatatgcaacagcaaacacaacagcagcagcaacaacaatctttGCAGCAGGCGCAACCATCCGCCTTCACTGAGTTTAGTTTTCTGTACcaccaaaacacaacaacaacagcagcagcagcaacaacggcggCGACACCTACTACTTCCAACTTTGCACCGTTTGgcattcagcagcagcaacagcaacaacagttgcagttgcaacatcaTCCGCAGCATGGGTCCAGCGAGGCAACCAATGCCGCAACGCTTGCGTCCTCGTCGAGCAATTCGTCTGCATTGGACCAGGAGTGCTCGATGAATGCCACGTTTCGCGTGGCAAAGCCACAATCAATGCTGGGCGCCTGGTATCAGCCACATCAGGCGCAGCATCAGGTGACATCTTCGCACAGCCCACAACATGTGGATCAGCCTAGCAATTTTATTGCGGCTCTGTCTGCCGTCGATTGCTGCAGTGCAGCCGTCGATAGCGATATAAGTGAGGCTAAATACTTGGATCTGGATGCCTGCAAGCGGGAACagctgagcaacagcagcagccatatGCCTTCCGCTTCGACATCGACCACATCGTCATCgtttgctgcagcagcaacggagAGCAGTCTTGTCGGTGGCCTGGGTCTGAATATACGCACCGATGAGAAGATGCCCGCCAAGGGTGAGATTTCCGAGCAGGAAAGCAACTGCGACATTGAGAACTCTTGGAGTCAATCGATGTATGGCGACATATCACAGCGTTACTTTAGGAATCAGTTCACGGATGGCTACAACCAGCAGCTGGCCGATTGGCGTCACGACTACTATCCGGCGCAAGATCTcagtggccagcagcagcagcagcgagagcaAAAACGATTTGACTTCAATGCGGTCGCCTCGGAGTACGCACAGCCGAGCGAACTGGAAACTTCCTCGAGCTCAACGAGGAACAATCATTTGTTGGATGCACAGCCCACCACTTCCTCGTCGTCATCGGCTTTGTTGGCTGGTCCACCAATAGCCTCGACTTCCCGTGCTGCCGCCGAAGCGGAGGCGGTTGCAGCAGCGCTGGCGCAACGGAAGCCAGCACGTCGCAAGATCTACAAGTGTCCACACTGTGTTGCCATCTTCGAGAAACTAAAGGAGCGCAATGCGCATATGATTGGCGAGCACAACTATGTTCGCCAGAATCGCCGTCTCATCTGCACGCAGGCGCTGGTCAACGCTGCGATGCTGGCCCAGCCGATGGGTCAGCAGCCAGAGCAGCagatggagctggagcagcagcaacagcatcagttGCTGCAGGTGGGCCACAGCACGGGCGGCGCGGTGCACGAGGATTCCAAGGATGGTATTGTGAAGATTAAGCAGGAGCACTGTCAGGATAAGCACGATCCGGCATCGGAACAATTGCTTGGCCACTTGGAGATGCCGGATGTGAAGGACGCTGGCCTGCTCGATGCCAGCGCGGAAAGCGGACGCGATGCAGACATGAAGCCACCAACCACTGTTGCTGAGTTGGACGAAAAACCGACCATAGCACCGCTGGCCATGACGACGCCCGCTGCCAAACTGGCTGCTCTTTATCGCATGCTGATTGCCTACAACGAATCAAAGCTGGGCCAGGAGCGCAACAATCTGAGCGAACTGGAGCAGAAGGCCATGGAGAAATCCATTTTCTTGTGCTACATTTGCCGCACCGATTTCCCCTCTGTGAAGCTGTACGATGCGCATCTAACAGAGCATCCCGCCGAGTGTTTCACCTGCGGCAAGAAATTCTACCGCTGGAAGAACTTCTCCCTGCACTTGAAACGCCATCTGGGTTGGAAGGAGTTCGGCTGCTATGTCTGCGACAAGAAGTTTGTGGTGCGCAGCGCTCTCGTCGAGCACATGCGGATGCACACTGGCCAGACGCCACTGAAGTGCAAGATATGCGGCAAAAAGTTCAAGCGATACTCGAACTTGACGCAGCATCGCAAGCGCCACACTAAGATGACGGTGCGCAAAAAGGAATATGTGTGCCACTGTGGCGAAGTGCTGCCCTCAAAGGCCCGCTTTCTGTGGCACAAGGAGACGCACGACTTGAAGCCCAAATGCTGTCCGTACTGCTGCGATCGTTTCGTGCATGCCAACTCGCTGCGTCGACACATCCGGCTGGCGCATTCGGACAAGTTCGACTATGCCGAGCCGATGGAGTGTCCCATGTGCAAGCAGATCTTTGCGAAGACATCGATTAAGGCGCACATGGCGACGCACTCGACAGATCCGCAGTACGATTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATACATTCGTGGGTGCATGCGAATCGCACGGCCAAACCGTTCAAGTGCGAATACTGCCCCAAGGCGTTCGTGCGCGAATTGGACTTCAAGAATCATATGAATGCGCACAAGCAGATCAAGCCGTACACCTGCGAATATTGCGGTTGCAAGTTCATACGCAAGTACAACTATATGCGGCATAGGCGGGAGCATCATGGCAACAAGAAGTTCACGTGCGATCAGTGCGACAAGTCTTTCCATCGCCACTACTATCTGATTGAGCATCGGCGCATTCACACTGGCGAGCGACCCTTCCACTGCACCATCTGTGGCAAGAGCTCCACCACAAAGACCAATCACAACAAGCATCTGAAGATACATCATTCGCGCGATCCCTTCACAGTGGAGGTCTAA
- Protein Sequence
- MVDSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVKMTIAGNNNGGLDSALAAAVISSSSRSSVASTESVASTPPAGDVKPDVASVPTATATQPPQPPQLPQPPQPPQPPPPPATTTAAASTTSTSQSPASKAVALLDNASSSSNINSSNSTSGSNNNNKLSNPPIKAVKSAPPTTEAPATTSNNNTPTISSVAAVYPATLATDYRYEQQQQPQQQQQLHGFPRGTTTTLVIPQAPPQQHHNFLGNQQPPAQFAHQQQQPQSTMKFTYATAALPPPPLQLFAQQPTATQPHQKPPPAYGTAISQIRSQHNQNKQQHQHHQQQQQQQHINVQQHNANAAPPSGKQQHNSKIHADIFLNPPPPPQLTIPSSASVSSLSLSLSLSSSTSSRLQHPQQHHQQSHAASSSNYAATSCAPSSSVALMSGSPSARTSSRQSSNSPFGALLNAAAHAACSSPASTGASVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKDDGEFSVIERIYQSPPSVLHIHDDDEEEEEEEEDDDDQQGWANSDEEDHVKVPHEHVEDGDDEHEDSRSRVACKTTTKKSRKTKTSGRLHKRTSKHQLATTTEDEDDFMSIGSSCAESEHHPEEQQQQQQHAQHVSSAGGTAQLAASSSPAQLCTAPSTSSGAAVAVAAAAASSGKFMASGTIKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLVKVEKEEPMDEYDAVEVEMQLEQKPSLEHASGSSSSSSSSSNSSSSSSSGHGTTSVIRMASTSGANVAAEDLTQPPPMKVEVEPTALLPQRFSAPGQLRGPKKLVIKPKATATATSTTKKTENNAAAVATGSNSSSCAASHSISVTTPAELVQIKSENVEASTSSSGSILEKHLTTSYAAQQAARKHSAVNDDDARVLLEFANSKQLPMPGNSNHTTFVVNAASFASAGSVFASGSSGVNVQKSTKPGCGDEYILPDDTKLEVDEIVISSSSSYASTSQQQQQHMQQQTQQQQQQQSLQQAQPSAFTEFSFLYHQNTTTTAAAATTAATPTTSNFAPFGIQQQQQQQQLQLQHHPQHGSSEATNAATLASSSSNSSALDQECSMNATFRVAKPQSMLGAWYQPHQAQHQVTSSHSPQHVDQPSNFIAALSAVDCCSAAVDSDISEAKYLDLDACKREQLSNSSSHMPSASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSMYGDISQRYFRNQFTDGYNQQLADWRHDYYPAQDLSGQQQQQREQKRFDFNAVASEYAQPSELETSSSSTRNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAVAAALAQRKPARRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQALVNAAMLAQPMGQQPEQQMELEQQQQHQLLQVGHSTGGAVHEDSKDGIVKIKQEHCQDKHDPASEQLLGHLEMPDVKDAGLLDASAESGRDADMKPPTTVAELDEKPTIAPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYICRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKMTVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00583141;
- 90% Identity
- iTF_00564835;
- 80% Identity
- -