Basic Information

Gene Symbol
ZNF526
Assembly
GCA_014170255.2
Location
CM024337.1:6611360-6613420[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.15 12 6.6 0.2 1 21 333 353 333 354 0.95
2 10 4.5e-06 0.00034 20.9 0.3 1 23 362 384 362 384 0.98
3 10 0.00063 0.048 14.1 1.4 1 23 387 410 387 410 0.92
4 10 1.2e-06 8.9e-05 22.7 0.8 2 23 417 438 416 438 0.98
5 10 3e-08 2.3e-06 27.7 1.0 1 23 444 466 444 466 0.98
6 10 3.8e-06 0.00029 21.1 0.6 1 23 472 494 472 494 0.99
7 10 0.00032 0.024 15.0 2.3 1 23 500 522 500 522 0.98
8 10 0.00092 0.071 13.6 0.3 1 23 528 550 528 550 0.98
9 10 8.5e-05 0.0066 16.8 3.7 1 23 556 578 556 578 0.99
10 10 0.00074 0.057 13.9 0.1 1 23 584 606 584 606 0.96

Sequence Information

Coding Sequence
ATGGACATCGATAAGATTTGCCTGACCTGCCTGAGCTCGACGGGTCCCTTTCTGTCCATCTATGACAACGGATCGGGTAGCTGCTTGGCCGATATGCTCAGGGAATTTACAAAAACCAAGCCGCGTCGCCACGATAATCTGCCGGAGAAGGTGTGTCTGGGCTGCTTGAGTGAAATAAACCACTGTTACACGTTCAAGATCATGTGTGAGAACTCCAGTCGAACCCTGCGCCAATTGCTGCCAAATGCCCTTCCCGAGGAAGAGGACCTGGAGAAGGCGTCCATCAAGCAGTCAGTGCCCACCAACGATCAGGCTATGCAAACTCCCAACTGGGAGTCCAGCCGGTCCACGGTGTCCACACAAACGGATTCAGTGGTCATAGATAACGGCAGTCTGGTTAAGCGCAGGATTTCATTGCACTTGGACGACGACGAAGATGACGGAGACGGTGATGGTGAGGGAGAAGTATTCGATTACGAGCTGACCGACGAGCCCGTGGAGAAGACAACCAGCATAATCCTGCAAGTACAGGAAAGCTTGAAAGTTGAAAAGGAGGTCGTCTACACTCAGGCAAATGTCATTTATGAGGGCGATGACAACGAGCTGGAACAGCAGATCCGGGAGTGCAATCTGGCCATATTTGACAGTGTCGAGAATGAGGTTCCAGGTGTCTCAATGCAAGCTCAACAGGTGACCACAAGGTCAGCTAAACTTCTGATGCAGCAGCAGCAGGAGGCTGTTGCTAAGCAAGAAGAGGAGGCTGCTCCTAAGCAGGAAGCTGAGCCGGCGAAGAGATCCTCTCGCCGAAGGGCAGCTGAAAAGCAGGAGGTGCATACCACGTCAGAGGCCTCCACATCCTCTCCCTCGAAGCAGCTGCGGATGGGAACCAGCCGCAGATCACTCAACTCAGTGGTAGTAGCTGGAGCCACCTCGTCCTCCGCGGCTGGAGAAACTAGCACAGGAGAAGCAGGTGCTTTTTTAGTAACTGAGCTAAAATACCATTGCGATCGCTGCAATGCTGGTTTTGCTCTGGAAAAATCCCTAATTATCCACAAAAGACAGAACAGTTGCACGAACCGGAATTTCAAATGCGATGAGTGCGAAAGGGTCTTTGTTTCGCCGGATCATCTTGCCGAGCACCGCGCCAGTCATGGCTCTCACAATTGTCCGGAGTGTGGAATGAAGTGCGAGTCCAAAGAGCAGCTGGGTAAGCACATGGTCCAGGGCCACAAGCGGAATCTGCGAAACCAGTGCAACGTTTGCCAAAAGGTTTTTACCATGCTGTCAACGCTGCGTGACCACATGCGCATCCACACAGGCGAGAAGCCATTTGTCTGCAATATCTGTGGCAAGAGCTTCACGCAGAACGCCAATCTGCGCCAGCACAAGTTACGCCACTCGGAGACGAAGAGCTTCAAGTGCGAGCTGTGCCCGCACTCGTTCGTAACCAAGGCGGAGTTGGCCTCGCACGCCCGCACCCACACGGGCGACAAGCCCTTCGAGTGCGAGGTGTGCGCGGCAAGGTTTACCACCAGCTGCTCGCTGGCCAAACACAAACGTAAGCACACCGGCGAGAGGCCTTACGCCTGCGATCTGTGTCCCATGAGGTTCACCGCCCTTAATGTGCTTAAGAACCACCGGCGGACGCACACAGGCGAGCGTCCATACGTGTGCCCATTCTGCTCAAAAACCTTCACGCAGCGTGGCGACTGTCAGATGCATCAGAGGACACATCAGGGCGATCGCATCTACATTTGTCCAGTGTGCAACGAGGAGTTCACGACAATGCCAGAGATGCGAACGCATTTGTCCGGACACGAGCAGCATGACAAGCGGCTGGTGCACTTTACCCTTATTAGCAACAAGGAGAACGGAAGCGGTCCACTCGAGGATGATATTAACGAGATGGCAGAGTCGGCGCTGATGATATAA
Protein Sequence
MDIDKICLTCLSSTGPFLSIYDNGSGSCLADMLREFTKTKPRRHDNLPEKVCLGCLSEINHCYTFKIMCENSSRTLRQLLPNALPEEEDLEKASIKQSVPTNDQAMQTPNWESSRSTVSTQTDSVVIDNGSLVKRRISLHLDDDEDDGDGDGEGEVFDYELTDEPVEKTTSIILQVQESLKVEKEVVYTQANVIYEGDDNELEQQIRECNLAIFDSVENEVPGVSMQAQQVTTRSAKLLMQQQQEAVAKQEEEAAPKQEAEPAKRSSRRRAAEKQEVHTTSEASTSSPSKQLRMGTSRRSLNSVVVAGATSSSAAGETSTGEAGAFLVTELKYHCDRCNAGFALEKSLIIHKRQNSCTNRNFKCDECERVFVSPDHLAEHRASHGSHNCPECGMKCESKEQLGKHMVQGHKRNLRNQCNVCQKVFTMLSTLRDHMRIHTGEKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELASHARTHTGDKPFECEVCAARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTHTGERPYVCPFCSKTFTQRGDCQMHQRTHQGDRIYICPVCNEEFTTMPEMRTHLSGHEQHDKRLVHFTLISNKENGSGPLEDDINEMAESALMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00491650;
80% Identity
-