Dtri006000.1
Basic Information
- Insect
- Drosophila triauraria
- Gene Symbol
- -
- Assembly
- GCA_014170255.2
- Location
- CM024335.1:15133131-15138847[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7e-12 1.8e-08 34.0 0.0 1 40 658 698 658 701 0.90 2 4 3.9e-14 9.7e-11 41.2 0.1 2 39 713 750 712 753 0.94 3 4 9e-18 2.3e-14 52.8 0.0 1 45 767 812 767 812 0.98 4 4 9.2e-20 2.3e-16 59.2 0.0 1 43 819 862 819 863 0.97
Sequence Information
- Coding Sequence
- ATGGCCGAGGAGGAGATGGTGGAGATGGAGCCGGAGATGGAGATGTGGGTGGGCCTCTTGCGCACCGCCGAACAATTAAAGATCAAGGGCCTCTGCGAGACCGCCGAGAATGCGGATGACTTGAACGACGCGGCCACAGCAACGATCACAGTTTCGGAGAACATTCAGCAGGCGGTTGTTGGTAACATTGTGAATGCCACCATAGTTCCTGGAGCACCATCGCCCTCCTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGCTGACGCAACACGGAGGAGTGCCCAGCAGTGGTGTTCCCCTAACCGGACAGTTGTTGAGCTCCGCAGCGAGCGGCAGTAGCGGTAGCTCCGGCTCCGGCGGACAGCAGACTTCACTGACGTCATCCGGTCTACAGTCGACGCCACGCAAGTCCCGGTTAAAGCGATCCAAGTCACCGGATTTGCCTACAGGCTCTGGAAGCTCTGGTGGCTCGAGCAGCTCACAGTCACAGCAGCAACAGCAGCAGCAGCAACCGCAGCCAGCACACCACCATCCCCACCAGACCATTCTCATCCAGGGCCAGAATCCCACCTCGATTGTTAGCCTGCAGCAGACGGCCGACGGCAACTATATACCGGTCGGAGCAGGAACTGGCGACGAATCGGACACCGAGAACGATCACGATCACGAGCACGAACACGAGCATATCCACGGGCACGGACACGGACACGGACACGGGCATCCGCACGGACACGGCCACAGTCACAGTCACGACCACGACCACGATCACGATCACGAGCTCGAGAATAAACCGAATAAGATCTGCAAGACGGAACAGTCGGTGGCATCGCCGGCGTCCAATTCATCGAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATACAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATCCATCGGCTCGATCAGTCCCCCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGGACACGTGACGCACGCCGATATTGGCGGTGCCACAGTCATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGACCAGCAGCACGGTCTGGGCGGCGGCAGCGTTTGTGGCCCGGGTGGGCCAGGTGGTGCTGGTGGTGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGGCGGGAGGGCATCCGCCTAGCGGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCAAGCGCTGAGTTTGGCATACCAACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGTTCGAATCCGACGCCTTGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCTGTGCGCGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTATGGCCGCTTCAAGCGTGGCAAATACGATGTCGTGGCCAACACGAGCGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGGTACGTACATGGCCTATGGGATAG
- Protein Sequence
- MAEEEMVEMEPEMEMWVGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLTQHGGVPSSGVPLTGQLLSSAASGSSGSSGSGGQQTSLTSSGLQSTPRKSRLKRSKSPDLPTGSGSSGGSSSSQSQQQQQQQQPQPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHDHEHEHEHIHGHGHGHGHGHPHGHGHSHSHDHDHDHDHELENKPNKICKTEQSVASPASNSSSANSNNAAGVSGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSVRTWPMG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00489997; iTF_00524336; iTF_00613425;
- 90% Identity
- iTF_00524336; iTF_00613425;
- 80% Identity
- -