Basic Information

Insect: Drosophila testacea
Gene Symbol: stc_1
Assembly: GCA_035043265.1
Location: JAWNND010000361.1:23225-26976[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1.4 1.5e+04 -3.6 0.5 15 18 335 338 334 339 0.79

2 17 1.9 2e+04 -4.1 1.6 15 19 362 366 361 366 0.81

3 17 0.055 5.8e+02 0.9 2.0 4 11 395 402 394 403 0.90

4 17 5.7e-07 0.006 16.8 15.1 1 19 407 424 407 424 0.93

5 17 1.7 1.8e+04 -3.9 0.9 6 10 450 454 449 454 0.88

6 17 6.5e-08 0.00068 19.8 13.8 1 18 460 477 460 478 0.98

7 17 1.7 1.7e+04 -3.9 1.5 7 13 482 488 482 489 0.75

8 17 2e-09 2.1e-05 24.7 12.9 1 19 518 536 518 536 0.98

9 17 1.1 1.2e+04 -3.3 0.5 5 10 566 571 566 571 0.90

10 17 0.00014 1.5 9.2 16.6 4 19 584 599 577 599 0.86

11 17 0.0077 81 3.6 8.0 1 11 639 649 639 650 0.96

12 17 0.86 9.1e+03 -2.9 0.5 4 10 654 660 653 660 0.86

13 17 2.7e-10 2.9e-06 27.4 15.1 1 18 666 683 666 684 0.97

14 17 1.6 1.7e+04 -3.8 0.9 6 10 713 717 713 718 0.81

15 17 2 2.1e+04 -9.0 11.1 10 18 731 740 720 741 0.72

16 17 2e-07 0.0021 18.3 13.3 1 16 777 792 777 802 0.94

17 17 2.4e-05 0.25 11.6 13.7 1 19 809 828 809 828 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1.4	1.5e+04	-3.6	0.5	15	18	335	338	334	339	0.79
2	17	1.9	2e+04	-4.1	1.6	15	19	362	366	361	366	0.81
3	17	0.055	5.8e+02	0.9	2.0	4	11	395	402	394	403	0.90
4	17	5.7e-07	0.006	16.8	15.1	1	19	407	424	407	424	0.93
5	17	1.7	1.8e+04	-3.9	0.9	6	10	450	454	449	454	0.88
6	17	6.5e-08	0.00068	19.8	13.8	1	18	460	477	460	478	0.98
7	17	1.7	1.7e+04	-3.9	1.5	7	13	482	488	482	489	0.75
8	17	2e-09	2.1e-05	24.7	12.9	1	19	518	536	518	536	0.98
9	17	1.1	1.2e+04	-3.3	0.5	5	10	566	571	566	571	0.90
10	17	0.00014	1.5	9.2	16.6	4	19	584	599	577	599	0.86
11	17	0.0077	81	3.6	8.0	1	11	639	649	639	650	0.96
12	17	0.86	9.1e+03	-2.9	0.5	4	10	654	660	653	660	0.86
13	17	2.7e-10	2.9e-06	27.4	15.1	1	18	666	683	666	684	0.97
14	17	1.6	1.7e+04	-3.8	0.9	6	10	713	717	713	718	0.81
15	17	2	2.1e+04	-9.0	11.1	10	18	731	740	720	741	0.72
16	17	2e-07	0.0021	18.3	13.3	1	16	777	792	777	802	0.94
17	17	2.4e-05	0.25	11.6	13.7	1	19	809	828	809	828	0.96

Sequence Information

Coding Sequence: ATGGCCGAAtattggcagcaacaacaagagcagcgacaacaacaacagctaataACTAACGGATCAGGCGGCGTTCCAGCCAATCGGGATGAGTCAGCATCATCTGGctctggcaacaacaataacaactatgtaaattttaatcaGTTTATTTCGCAACATAATCTGGCCACCTCCAATGTGCCTTACAATATTGGAGGCGGCGGTGGTGCCTTTGGACTGACGTCCTCGTCCTCtggcagcaacaccaacaactttTCTGGCCCTTTATTTGGTTATCCGAATGGCGAAGGGGGAGGATCGAGCAACAACTATGCAGCATCAACTGCTTATCCCAATCTATACTCACCTTTTGGAAATAATCCCTTTGCCTCCGCAAGTGGCTTTGATTTCAGCACTTCCAAGCTGCAGGCATCGGCACCTGAATTTGTGCCCAACTTTGCCAAGCTCAGTctcgaaacaacaacagacacatccaacaaaaataataacaacagcagcaacactgcCATTCAGTCAAACAGTGAACAAGTCAACGAGGCGTCAACAACTaacaatcatcatcatcaacagcaacaacaacagcaacagcaacatcaaagGTTACCCAAACCTCATGGCACTAATAGTCGTCAGCAGCGAAGAAATGATTACAGAGAGGATCGAATTGAACGTAATGAGGATCGTTATGATCGCAAGAAGCCACAGAAGCAACAGCGCTACGACAATCATCGGAGCAATAAAAGACGCGATGACTGGAATCGCAATCGGGATCGAATTAATGGTTATCCACGTGCCACCGAGGAACTggacaccagcaacagcaacgataGTGCACATCCCTCACCTGAGaagcaaaaacagcagcaaatctCTCCGAGACGTGCTCCAGATAATGAAAAGTTGTCGCAACGTGAGAAACTCATGCGAGATATTGAACAAAGGCGATTGGAGTGTTTGGTGTGTGTGGAACAGATCAAGGCTCATCATGGCACTTGGTCGTGTCAAAACTGTTATCATGTCCTGCATCTCAAGTGCACCATCACTTGGGCAAGCAGCTCCAAGTCAGCAGAGGGCTGGAGATGTCCAGCCTGTCAAAATGTGCTGCAGGAGCTACCACGTGAATATCTCTGCTTCTGTGGCAAGCTTAAGAACCCTCCATTGACTCGCACCGAGTTGGCCCATAGCTGTGGAGAACTTTGCTGTCGGGTCGAGGGTTGCAGTCATGCTTGCACCTTACTCTGTCATCCGGGTCCGTGTCCGCCGTGCCAGGCAAACGTGAGTCGCAGTTGCGGCTGTGGACGCACCAATAAGCTGATGCAGTGTGCCATGAAGCAGACACTGCAGTGCGAGGCCATTTGCGATAAGCTGCTCAACTGCAGCGAGCATCGTTGCCAGCAGATTTGTCATGCCGGCAAGTGCGAACCTTGCGGAGAGCAAGTGCAGCAGAATTGCCACTGTGGCAAGCAGCAGCGAGAGGTGCTATGTACTAGGGAGAGTCAGGACAAGCGCAGCTATTCGTGCAAGGAATGCTGTGGCAAACCGTTGCCTTGTGGCAACCACAAGTGCAAGGATTCATGCCACGCTGGCGCCTGTCGTCCATGCAAATTGAGTCCCTCACAAATCACCAGCTGTCCGTGTGGAAAGCTTCCTGTGGCACCCGAGCAGCGCAGTAGTTGCCTTAATCCTGTGCCCACGTGTGAAGGCGTCTGTGGCAAGACATTGCGCTGTGGCAAACCGGCGCATCCTCATCAATGCACCACCAAGTGCCACTTGGGTCAATGTCCACCCTGCACGAAGCAAACTGCCGTCAAGTGCCGTTGTGGACACATGGATCAGATGATCAAGTGTCGGCAGCTTTCAACCCGAGCGGACGATGCCCGCTGCAAGCGACGTTGCACCAAAAAACGAAGTTGTGGCAAGCACAAGTGCAACGCTGAGTGTTGCATTGACATCGACCATGCCTGTCGTTTACCCTGTAATCGCACTTTGAGCTGTGGACGCCACAAATGCGATCAGCCGTGTCATCGTGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAACTCTATTGTGAGTGCGGTGCGGAAGTCATCTATCCACCTGTGCCTTGTGGCACCAAGAAACCCATTTGCAAGCGTCCCTGCTCTCGCACCCATCCCTGTGAGCATGTGCCCCAGCATAACTGCCATGCGGCAACCACTTGTCCACCCTGTATGATGTTCACCACGAAATGGTGTCATGGCAATCACGAGCAGCGCAAAACCATTCCCTGCTCCCAGGCCAGCTTCAGCTGTGGCCTCGCTTGTGGCAAGCCGCTTGCTTGTGGACGCCACAAGTGCATCAAGTCCTGTCACGAAGGCGACTGTCAGCAGGCAGGTGAATTGTGCCGCCAAAGCTGCACCAAACCTCGCCTGCTCTGTGGTCACAAGTGTGCTGCCCCGTGTCATGAGAGCGATTGTCCAGAGACGCCGTGCAAGGAGCTTGTCGAGGTCCAATGCGAGTGTGGCAATCGCAAACAGAATCGCAGTTGTCAGGAACTGGCCAGGGAGCACAGTCGCATTGCCACCGCCCAGCTGGCTTCCTCCATGGCCGAGATGTCTCGAGGCAACTACATGGAACTCAGCGAGATTCTGGCGCCCACCAAAACtatcaaatcaaacaaaacGCTAGACTGCAATGACGAATGTCGTCTGCTGGAACGCAATCGTCGTTTGGCCATCGGTTTGCAATCGCGTAATCCGGACACACAATTAAAATCACTTACCAAGTACTCGGAATTCACACGCGGTTTTGCCAAGCGCAATCCGGCTTTAACCAAGAGCGTCTATGAAACATTAAGCGATTTGGTTAAGTTGGCCAAGGAGAGCAAGCAAAAGTCGAGGAGTCATTCATTTCCCACTATGAATCGTGAGAAGCGTCAATTGGTGCACGAACTGTGTGAAGTGTTTGGCGTGGAGTCCGTGTCCTACGATAAGGAGCCCAACCGGAATGTGGTTGCCACGGCACATAAGGAACGCTGTTGGTTGCCTGCCACAAGCATCATGGAGGTGCTGGCACGCGAATCCGGACAACGTCGCGTTCCAGTTCCCAATAACAATGCCTGGAGTCTCAAAAAGTAG
Protein Sequence: MAEYWQQQQEQRQQQQLITNGSGGVPANRDESASSGSGNNNNNYVNFNQFISQHNLATSNVPYNIGGGGGAFGLTSSSSGSNTNNFSGPLFGYPNGEGGGSSNNYAASTAYPNLYSPFGNNPFASASGFDFSTSKLQASAPEFVPNFAKLSLETTTDTSNKNNNNSSNTAIQSNSEQVNEASTTNNHHHQQQQQQQQQHQRLPKPHGTNSRQQRRNDYREDRIERNEDRYDRKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYPRATEELDTSNSNDSAHPSPEKQKQQQISPRRAPDNEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSAEGWRCPACQNVLQELPREYLCFCGKLKNPPLTRTELAHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKQTLQCEAICDKLLNCSEHRCQQICHAGKCEPCGEQVQQNCHCGKQQREVLCTRESQDKRSYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPSQITSCPCGKLPVAPEQRSSCLNPVPTCEGVCGKTLRCGKPAHPHQCTTKCHLGQCPPCTKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACRLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPICKRPCSRTHPCEHVPQHNCHAATTCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKSCHEGDCQQAGELCRQSCTKPRLLCGHKCAAPCHESDCPETPCKELVEVQCECGNRKQNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPTKTIKSNKTLDCNDECRLLERNRRLAIGLQSRNPDTQLKSLTKYSEFTRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPNNNAWSLKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00472738;
90% Identity: iTF_00584110;
80% Identity: -