Basic Information

Insect: Drosophila teissieri
Gene Symbol: -
Assembly: GCA_016746235.1
Location: CM028593.1:15803057-15804992[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.27 23 5.5 1.9 2 23 209 232 208 233 0.93

2 10 2.1 1.8e+02 2.8 1.4 6 23 242 259 242 259 0.98

3 10 0.0054 0.47 10.9 1.0 1 23 265 288 265 288 0.97

4 10 4.7e-05 0.0041 17.4 1.5 1 23 296 318 296 318 0.97

5 10 5.6e-07 4.9e-05 23.4 3.3 2 23 325 347 325 347 0.98

6 10 9.1e-06 0.00079 19.6 0.7 1 23 354 377 354 377 0.97

7 10 0.047 4 7.9 0.2 2 23 387 408 386 408 0.95

8 10 0.071 6.2 7.4 0.3 2 23 418 439 417 440 0.93

9 10 0.00017 0.014 15.6 4.5 1 23 445 467 445 467 0.98

10 10 8.4e-05 0.0073 16.6 3.7 1 23 473 496 473 496 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.27	23	5.5	1.9	2	23	209	232	208	233	0.93
2	10	2.1	1.8e+02	2.8	1.4	6	23	242	259	242	259	0.98
3	10	0.0054	0.47	10.9	1.0	1	23	265	288	265	288	0.97
4	10	4.7e-05	0.0041	17.4	1.5	1	23	296	318	296	318	0.97
5	10	5.6e-07	4.9e-05	23.4	3.3	2	23	325	347	325	347	0.98
6	10	9.1e-06	0.00079	19.6	0.7	1	23	354	377	354	377	0.97
7	10	0.047	4	7.9	0.2	2	23	387	408	386	408	0.95
8	10	0.071	6.2	7.4	0.3	2	23	418	439	417	440	0.93
9	10	0.00017	0.014	15.6	4.5	1	23	445	467	445	467	0.98
10	10	8.4e-05	0.0073	16.6	3.7	1	23	473	496	473	496	0.97

Sequence Information

Coding Sequence: ATGATATGCCGCCTGTGCCTGGACGATGCGGAGCACAGTGTGCCAATCTTCGACCAGGAAGACTCCGGCGATCAGCCGGTGCCCTCCAATCTGGCGGAGCTAATTGAGAAGCACCTGCAGTTGGTGCTCCTGCCCAACGATGGTGTGTCCAAGAGCCTCTGCACCCAGTGCTGGCAGCAGTTGGCCGACTTCGAGCAGTTCTGCGCCATGGTGATGAAGAAACAGTTGGGCCTACAGCAACTGAAGATGGAGCCGTTCTCTGAGGACGAGGATGCGGACACAAAGGCGCAGATCCTGTGCGAACCGGAGATAGATGTGAGTCCTGCGGCCGCGGACAACGAGGAGTGCAACGAAATCGACGGGGACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCGACGGGGAATGCGCCTGCCCTCGCCCATTAGACGCAGTATGCGTCTACCCCGGGCAGTCACAGCACCCAAAACTCAGGCGGTCAAGGCCAAGGCCAGGACGAAGCCACACAAGGAGGAGGCCGACGACGATGAGGATGCTGAGGGCGATGCGGAGAGCCGCAGCACCAATAGCCGGGAAATGGACAGCTACATCGCTCTGCACGGCCGTTTGGAGTGCTGCATTTGCGGCGGCGACGAGCAGTTTCCCAATTTTGCCGAGATGAAGCGGCACTTCCGGAATCATCACCAGTCTCTCGGATATGTGGTCTGCTGCCAGCGGCGCTACAAGAAGCGTGCGCTCTACGTGGACCATCTACACATGCACAACGATCCGAATTACTTTAGGTGCAAGATCTGCTCCAAGCAACTGGTCAGCCGAATTAGCTACGATGTACACATGCTGCGCTTCCACCCCAACAAGGACGACCTGAGCTTCGCGTGCGATCAGTGCTCCAAGCGGTTTTCCAAGCAGTTCCTTCTCACCATTCACTCCAGGGTGCACCAGCAGGAGCGCAATGAGCAGTGCAAGCACTGCGACAGATCCTTCCGCACCGCCGTTGACCTGCGACTGCACATGCGACGCACCCATGACCCCGCCTTCGTGCCCTTCATCTGCGATTCGTGCGGCGCCAAGTTCAAGACGAAGCAGAACCTGCTAGTGCACAAGCGGACCGTGCATCGCGAGGGCTCCCAGCTGCCGGAGGTACAGTGCCAGGAGTGCCAGGTGTGGCTGTCCGACGAGAACAGTTTGCGCAAGCACATGTACATGCATCTGGATGCCGCCTCGCTGCGGCAGTGGAAGTGCGAGCAGTGCGGCTTGGAAAAGGGATCGCGGGCTAAGCTTGCGGCCCACATACGCTACCATCATCCAAAGGAGTACCATAAGTGCACGCACTGCGCCAAGGAGTTCAAGAGCAGTCGCAGCCTGGAGGAGCACACGGCCACGCACACCGGCCAGGACCTGTATGAGTGCGCCTTCTGTGAGCGCACCTTCAAGAACTCGGGAAACATGCACAAGCACCGCCGCCAGATGCACGCCGCCCAGGTGGCCGCCCTGCAGCAGCAGAAGAAGGTGCCACCCAGTAAGCGCAAGGAGAAAGGTGACCTGCTACTCGACGTCCTGGCCGCCGGAGGAAAGGAAGTGAACCGAGTCATGGGTGTGGGCGACATGAATGACTGA
Protein Sequence: MICRLCLDDAEHSVPIFDQEDSGDQPVPSNLAELIEKHLQLVLLPNDGVSKSLCTQCWQQLADFEQFCAMVMKKQLGLQQLKMEPFSEDEDADTKAQILCEPEIDVSPAAADNEECNEIDGDAXXXXXXXXXXXXXSRRGMRLPSPIRRSMRLPRAVTAPKTQAVKAKARTKPHKEEADDDEDAEGDAESRSTNSREMDSYIALHGRLECCICGGDEQFPNFAEMKRHFRNHHQSLGYVVCCQRRYKKRALYVDHLHMHNDPNYFRCKICSKQLVSRISYDVHMLRFHPNKDDLSFACDQCSKRFSKQFLLTIHSRVHQQERNEQCKHCDRSFRTAVDLRLHMRRTHDPAFVPFICDSCGAKFKTKQNLLVHKRTVHREGSQLPEVQCQECQVWLSDENSLRKHMYMHLDAASLRQWKCEQCGLEKGSRAKLAAHIRYHHPKEYHKCTHCAKEFKSSRSLEEHTATHTGQDLYECAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVPPSKRKEKGDLLLDVLAAGGKEVNRVMGVGDMND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00609377;
90% Identity: iTF_00591937;
80% Identity: -