Basic Information

Gene Symbol
hang
Assembly
GCA_016746235.1
Location
CM028593.1:11993903-12008806[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.18 16 6.1 1.0 3 23 69 90 68 90 0.93
2 19 0.23 20 5.7 3.2 3 22 198 217 196 217 0.89
3 19 0.00039 0.034 14.5 3.3 1 22 330 351 330 353 0.90
4 19 0.045 3.9 8.0 0.1 2 21 365 384 364 385 0.93
5 19 0.00045 0.039 14.3 0.2 2 23 522 544 521 544 0.95
6 19 0.0013 0.11 12.8 0.1 1 23 552 575 552 575 0.96
7 19 1.1e-05 0.00092 19.4 0.1 2 23 656 677 655 677 0.97
8 19 0.00019 0.016 15.5 2.9 2 23 759 781 758 781 0.97
9 19 0.015 1.3 9.5 0.2 2 23 790 812 789 812 0.95
10 19 0.00024 0.021 15.1 0.2 1 23 825 848 825 848 0.97
11 19 8.2e-05 0.0071 16.6 1.1 1 23 897 919 897 919 0.99
12 19 0.0013 0.11 12.9 0.9 1 23 927 950 927 950 0.96
13 19 5.5 4.8e+02 1.4 0.2 2 13 958 969 958 971 0.85
14 19 2.1e-05 0.0018 18.5 1.4 3 23 1066 1086 1065 1086 0.98
15 19 0.0033 0.29 11.6 0.1 1 23 1121 1143 1121 1143 0.97
16 19 0.00039 0.034 14.5 0.6 2 23 1222 1244 1221 1244 0.93
17 19 0.55 47 4.6 0.1 2 20 1264 1282 1263 1284 0.91
18 19 0.0043 0.37 11.2 0.4 3 23 1299 1319 1299 1319 0.98
19 19 6.6e-05 0.0058 16.9 2.1 1 23 1614 1636 1614 1636 0.98

Sequence Information

Coding Sequence
ATGAAGTCCATAGACGAATCCGATGACATGGTCGATCCCACAATGTTCCTAGAGCGCTCCGAGCACGAGGGCGATGTCCCGCTGACGGCCTCGGACTACGACTACACTGCGCAGCATGGCGTTAATGCCTCGTCGGTGGCTGCCTCGCTGCCGCCGAATGCGGTGGCCAATGTGGCAGCCGCCGGGGACTCCAAGGTGGCCAGCTGCAGGGCCTGCAGCCTGCAGTTCTCCACCCGGGCCAACGCCCGTCGCCACGAAAGGAATCTGCACCCAAACCTGTTCCAGTTGTCCACAGACTCCCCCCACAACACACCCATCACGAAGCCAACGCCCGCCCTGGCTGCCGCCTTGGAAATCCAACGGGCAGCGGCGGCGGCGGCCACCGCGGAGGCAAATCGGGCAGCGGGCGCTGCTGGCGGGAATATCTCCACACAAAAGTACCGCCAGGTGGTGATGAACGCGTTTATTAAGTGCGAGGGCGGCGGCTACGACTACGATAATCCCGAACAGTACCGACCACTGCTCACCCGCGACAAAGTGGAGTTCATTGAGCAGAACGACGAGTTCCTTGAGCAATACCAGACGATGACCTGCCGATGTTGCAACAAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCAGCTGCCGCGCAACCTTTGCTTCAATTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTGAAGAAGCGAAATTGCATAAATCTCTTTAGAGTGTTGAATGCGCTGCGTGGTAAAACAACGACAGTGATGGTGCCCACTGCCGAGGATATGACAGACGATGGAGCAACAGGAGTTGTGGCGGTTGCCGATGCCGGAGCTGGAGCGGTGGCCATGAATAGTCCCACAGTTACAGCGAGCGGAGAAGTGGTTACTCCCGGCGGTGGCTCCGAGCGCCCAGAGAAACTGCGCGCCAAGGAACTTCTGGTCAACAAGCTGTACGAGTGCAAGCTCTGTCCCAAGGGATTCCGCACCAAGCACGAGTTCCGAACGCATGTCTACGACAAGCACGCGGATGTCCAGCGCAAGGATAACAACTCGATACAGTGCAGCTTCTGTGGGCTGGATTTTGCTGATCCCGTGGACAGACGGCGGCACTACAACAACATGGACTGCATTGTCCGGCTGCGCTGCATGACGTGCGATGCCAAGCTGGAAACGCACCAGCGATTCCTCGATCACGTCTATCAGGATCACTTGGGCGGCGTGGGTGGCGGGGCGGTCAGCGACAATGCCTCCACCACTGGCAGCGGCATGGCCAGGAGCAACAGCATGGAACATTCGCCGGGCAAGAGGAGCCTGCTCGGCGCCTTAGGCATTGGTGTTGGATCCTCGGCGGAGGAGTCGCGGAGCAGCAGTGCGGCTCCGCCACTGACCTCCACACCAAAGCCGGCGGGGGGTACTCAGGTGGGTGGCGGTGGATCCACCAGCGCCTCTGCCGCCGCAGCCGCTCAGAACTCAGCGAATCGGGATGCATCCGCACCCAAATCCCAGTACTTCTCCCGTATGCCGCAGGTATGCCCCATTTGCGGCCAGCAGTACAACAACTACAACAATGTGCTGCGCCACATGGAATCAAAGCATCCGAACAAACTGCCAGAGACATACAAGTGCGTGCGATGCGGACTTGGTTATCCTCGGATCTCCTACCTACGGGAGCATATGATCAATGTGCACGGAGTGGACAAGAACCGACACTCTGGCGGCTTCGAATACATCGTGAACGCGGATGCAGTGAAGTTGGCGGACGGAAGCACGCCGAACGTCTACACGGGTCGCTACGACTACGTGATGAAGGACCTGATGTCGATAACAAATGATGATGAAGAGGAGGAGCCTGGCAGCGTGGCCAAGAAGATGCGCCTGGATGACAGCAGCAACAACAGCAGCCTGGTGGGCGTGGCTAGCCAGCAGAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAACATTGGCCTGTCCAATCATATGCGTTCCCACTACACGGCATCGAATGCAGTGAATGCAGCTTTGGCGGCTGCCAATCGGATGACACCCAAATCGCTAACGATTACCGCAACACCAGCAGCGGATTCGGAGGTGGGATTTGGAGGAACAGTATCAGAGTCGGCTCCAGCAACACCTGCCAATGTGCCACCGGCAATGGCCAACCAAACGCCCCAGGAGCAGGCAGTTTTTCGACGGAGCCTTGACCAGGCAGCCGATCGCCGCTTTCGGCGAATGCGCTGCCGCATCTGCCAGCGTCGTTTCAGTTCGAAGAAGTCCTATCGCTACCACATGCTCACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAATGCAAGCTGTGCAACGCAGAGTTTGCCTACGAGAAGGGCCTGAAGGTGCATCTGTTCAAGGTGCACGGAAGGGCCATCAAGGATGAAATGATTATCAAGCAGTTCGAATGTGAGGTTTGCTCGATCGTCTATAGTTCAGAGACGGAGCTACAGCAGCACAAACGCAGCGTTCACAAGCTTACTTCCACTTCGGCGTCCACGTCCTCTAAGATTGACGATGACTCTCTAATGGACGAGGTCAAGCCTACAGCAGCGGATCTAGCTGATCTCTCCACCCTCGCGGCCGGTGCATCCACTGCATCTGCTCCACTGTACTGGTACCAGTGCAAGTACTGTCCATCAAACTTTAACACCAACAAGAAGCTGGCCATCCACATCAACTCGCACGACGAGTTTGACTCAAACGATTATTCCTGCAAAGATTGCGGAAACGTCTACAGCGGACGCAAGAGTCTATGGGTTCATCGCTATAAGAAGCACCCGCAAGTGCCCAACCCAGCTGAGTGCTCGCTGTGCCGCAAGGTCTTCTTCGACCGCCAGATGCATGACAACCACACGCCCACCTGCAACCGCAAGCCGATCACCTCGACAGGTGCCCACCAGCAGCAGGATGCACAGCTGCAGCAACAGCAGGCGCTCCAGCCGGCCAGAAGAACAGTTTTCCGGCATAAGACCGGCGATGACGATGACGAGGATGAGGACGATGAGCAGCAGCAACTGGAGGAGAGGGGAAACAGCGATGGCAATGGCACAACTGCCGGAGTGGCGTCGGGCAGTACTGTAACTGCGGGCACGTCACTGAAGATCCGCATTCCGGAGGTGGCGTGCACCATTTGCGGGGCTCGATTCACCGACCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAGCAAGAGCTGTACGTGGACAACCCACTGGCGGCGATGTTCGACGATGGGCCGGCGGATGCCGGTCAGTTCCAGGTGGAACGACAAAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATCGCACTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACACAACCAACAACAACAACAACTCGATGCTGCACCTCCGCGAGCTGCATGCGGTGGGCCTGATGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCAATGAAGCGGAAACGTGAACTGAAATGCGAATACTGCGCCTCCACCTTCATCAGCAATAACAATCTGCGTCGCCACATGTACGAGCTGCACAAACACGAGGTAAGCAATCTGCCCGAGCCGCCGGTGATTGTGGTGGACGATCACCTCACCTGCCGTCGCTGTCAGCTGACGTTCGACACAAAGGAGCTGTGGATCGAGCACAAGCTGGCCGATGCTAAGGTGGTGCGACCCTTCTGCCCTTTCCAGTGGGGCTGCGATCTGTGCGGCGAGTATCTGTCGCGCAAGGAGAAGCTGATGAACCACATTAACAACCATTTAAAGGAGGAGGTCATAGTGCCAGTGGCCACTAAGGCGGCCATAGAGAGAACAGCGGCCATGGAAGCAGCGGCAGCAGATGCAAACACATCGGCGCCACTATCAACATTAGGCGAAGGAGCAGAATCCGATGATAATTTTGTAGAGAAAGGTGAGGCTGCAGGAGCAACAGCATCAGAAAAGATGGCGAGTCCCGACGAGGAAGATAGCGATGATTTGGACGAGGATAGCTCCGGCGACGAGGATGAGAGTTCAGGCACCGGAGATGATGACGATGACGACACGGACGATGAGGATGGCGAGGGTGAAGATGAGGACGAGGAGGGAGATGGTGGCGAGGGCGAGGACGAAGAGGGTGTGCAGCCTCCCGCTCAACTCTTGACACAGAAGCAACACAAAGCGAATCTAAACCAGGACGACGATGATCTTGTCGAGGAGGTCATCAGCTCCGATGACGACGAGGACGATGATGGAGAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAGCCGGAGCCAGTGGCATTGCCGGTGCGCCCGCTAATGAATGGCAAATCAAAGATGCCGCCGCTGATAGTGGCCAGTTCGGAGGATGAGGACGATGGTGTGATGCCCATAGAGGACATCATCGAAGAGGAGTTCGATGAGGACGCCGATCCAGATCCCGATCCGGAGGATGCCATTGAGGAGGTAGACGACGATGATTTAGATGAGGGGGATGTGGAGGACGAGCCGAATGTGGTGTCGACGGCCTCCTTTTCGGAGAGCGAGTCTACCACAACGACCACGTCCAATTCGCATTCGCATTCAACGGGTGAGCGGCGTAAGAAGGCCGACGATCAGTTGAATGATCCCGGCTTTACCTGTGATCTATGTCAACTTTGTTTCGATTCTCAGGAGCTTCTCCAGAGCCACATCAAAAGTCATATCCTCAATGGGCCAAAGCTCTCAACAGCGCCAGCAGCAGCCACACAGCCAGCAGCGGCAACAACAGCAAGCAGCACGGCAACCGCATTAGTAACGGCAGCCAAGACGAAGCCTGACTCCAAGTCAGCGGTGCTGGCCAACAATAACAATAGCAAGACAAGCAGTAAGACTGTTGCTGCCACGGCGGCAGCTGCAGCAACTGCGACAAATTGA
Protein Sequence
MKSIDESDDMVDPTMFLERSEHEGDVPLTASDYDYTAQHGVNASSVAASLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPHNTPITKPTPALAAALEIQRAAAAAATAEANRAAGAAGGNISTQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTRDKVEFIEQNDEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPQLPRNLCFNCLKMNDSKALFISHLKKRNCINLFRVLNALRGKTTTVMVPTAEDMTDDGATGVVAVADAGAGAVAMNSPTVTASGEVVTPGGGSERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGAVSDNASTTGSGMARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSAAPPLTSTPKPAGGTQVGGGGSTSASAAAAAQNSANRDASAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNDDEEEEPGSVAKKMRLDDSSNNSSLVGVASQQKECPICNAVFSNNIGLSNHMRSHYTASNAVNAALAAANRMTPKSLTITATPAADSEVGFGGTVSESAPATPANVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSETELQQHKRSVHKLTSTSASTSSKIDDDSLMDEVKPTAADLADLSTLAAGASTASAPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPNPAECSLCRKVFFDRQMHDNHTPTCNRKPITSTGAHQQQDAQLQQQQALQPARRTVFRHKTGDDDDEDEDDEQQQLEERGNSDGNGTTAGVASGSTVTAGTSLKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTNNNNNSMLHLRELHAVGLMPXXXXXXXXXXXXXXXXXXXXXXXXXXSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIVVDDHLTCRRCQLTFDTKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIERTAAMEAAAADANTSAPLSTLGEGAESDDNFVEKGEAAGATASEKMASPDEEDSDDLDEDSSGDEDESSGTGDDDDDDTDDEDGEGEDEDEEGDGGEGEDEEGVQPPAQLLTQKQHKANLNQDDDDLVEEVISSDDDEDDDGEVXXXXXXXXXXXXXXXXEEPEPVALPVRPLMNGKSKMPPLIVASSEDEDDGVMPIEDIIEEEFDEDADPDPDPEDAIEEVDDDDLDEGDVEDEPNVVSTASFSESESTTTTTSNSHSHSTGERRKKADDQLNDPGFTCDLCQLCFDSQELLQSHIKSHILNGPKLSTAPAAATQPAAATTASSTATALVTAAKTKPDSKSAVLANNNNSKTSSKTVAATAAAAATATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00486721;
90% Identity
-
80% Identity
-