Basic Information

Gene Symbol
Klhl26
Assembly
GCA_016746235.1
Location
CM028593.1:19902125-19906560[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-30 4.1e-28 97.6 0.5 1 106 41 145 41 149 0.97
2 3 4.8 1.7e+03 -1.0 0.0 80 108 151 179 146 181 0.80
3 3 5.4 1.9e+03 -1.1 0.0 53 77 187 211 173 229 0.71

Sequence Information

Coding Sequence
ATGGCAGCGACGCCAGCGCCAGCAGTGACGCCGGCAGCGACGGCGACGTCGACTGCGGCGAAAACTCCTGCGAATCCATCGAATCCCTTGTCCCCCGAGGAGGAGACCCTTCTGCGCGGCCTCAACAAACTGCGCAACGAGGAGAAACTCACGGACGTCACCCTGATCGTCGAGGAGCACCGATTCAAGGCTCACCGCGTCGTCCTGGCGGCCAGCAGCGACTACTTCTGCGCCATGTTCGCCGACTGTGCCATGATCGAGTCGCGCAAGGACGAGATCAATCTCTATGGGATCACAGCGAGGGCCATGGGCTCGATCATCGACTACATATACACATCGATGCTGGAGCTGAACTACGATAACATCGAGGAGATCCTGGCGGCAGCCACACACGTCCAGGTGCGCGAGGTGATTGAGCGATGCACGATCTTTCTGGGCGCAAAGATCGAGATGGAAAACTGCCTGGCCATCGCGGGAATGGCCGATATCTATGGGATCATGGACTTGTCCGAGCGGGCCCACCGCTATATGTGCGCTCACTTCGAGGAGTTCGCGACCACGTCGGATTTCAAGGAAATGAAGGTGGACCAGTTGCGCTTCATCCTCTCCAGCAACTATCCCATCGACGTGGCCGAGCAGGATCTGGTGCGTCTGGTGTGCAGCTTTGCAATCGAACAGCAGCTGGAGGAGAACGCTTTGGGGGATCTGCTGAGGCTGATCAACTGGCCGCACATTAGCTATAAGTCCCTGGACGAACTGAGGCACATGAACTGCTCGCTGGACGAGGGAAAGCAGCTGCAACTGCCCACCACCTATTACAATCGAATCAAACAGGAGTACATGGGGCGCCTGCTCAACGGAGTGGTCCCCCTAAAGGATCAATCACTGCCACAGGGACCAACTAACATGCGGGGCATGGAGCTGTGCCTGCTCAAGATCGGCGGCTTCGAGTGGAAGGGACTGACCAACGTGATAATGTGCTTCTCGCCAACGAAAATGAATTGGTTCGAGTTGACTGCCATTCCGCACATCGATCAGTGCAACTTTGGCACTGCCGTTCTGAACAACAAACTGTTCATCGTGGGTGGAGCCTACGATGTCTGTCTAAAGGAGTACATCCATCCCTTTGGCTTCTGCTACTGTCCGCTCAGGAATACCTGGATGACCATAGCACCCATTCAGCTGGATCGCTGCCGCTTCTCATTGAACGCTGTGGGCGATCAGCATCTCTATGCTGTGGGCGGCATTCTGGACGATGATAACTCCGAAGAAGCCCTGCGCATGATCTCCAACGTGGAGCGCTACGATATCGCCCAGAATGTATGGACCTATATGCCCAGTCTGCAGGAGAATCGCAGTCAGCATGCCGGCGTCGTTGTGGGCGATAAGCTGTACATCTCTGGTGGCGTCCACTTGGCCAACATATTGGCGAGCTTGTGGGTGTTCGACACGAAGACAGAAGTCTGGCAAGAGCTGGCCTCGATGCCCACGCCGTGCTGCGACCACGTTTTGGTGGCGGTGGATAACCGAATCTATGCCTGCGGCGGATGGCACGAGAGTTTGACGGAGTCGCGGGTTCTGGTGGAGCACATCTATGCCTACGATATTGAGAGCAACACGTGGAGCGTGGAGACGCAGATACCGGCCCCAAAGTTCTACTCCGGCGTGACTGCGATGGGCAGAACCATATTCTTTGTGGGCGGACTGGACTCTACGGAATCGATTGATCGCGCCAGTGCGGAGACAATGGCCTACGACTTGGATAGCAAGGAATGGTGGCGCGAGAAGGACTCGTGGGACTCGCCCAACGATGTGTGGGAATCAACGTGCGTGGCCATCTATGTGCCCATGTGCGATTTCTAA
Protein Sequence
MAATPAPAVTPAATATSTAAKTPANPSNPLSPEEETLLRGLNKLRNEEKLTDVTLIVEEHRFKAHRVVLAASSDYFCAMFADCAMIESRKDEINLYGITARAMGSIIDYIYTSMLELNYDNIEEILAAATHVQVREVIERCTIFLGAKIEMENCLAIAGMADIYGIMDLSERAHRYMCAHFEEFATTSDFKEMKVDQLRFILSSNYPIDVAEQDLVRLVCSFAIEQQLEENALGDLLRLINWPHISYKSLDELRHMNCSLDEGKQLQLPTTYYNRIKQEYMGRLLNGVVPLKDQSLPQGPTNMRGMELCLLKIGGFEWKGLTNVIMCFSPTKMNWFELTAIPHIDQCNFGTAVLNNKLFIVGGAYDVCLKEYIHPFGFCYCPLRNTWMTIAPIQLDRCRFSLNAVGDQHLYAVGGILDDDNSEEALRMISNVERYDIAQNVWTYMPSLQENRSQHAGVVVGDKLYISGGVHLANILASLWVFDTKTEVWQELASMPTPCCDHVLVAVDNRIYACGGWHESLTESRVLVEHIYAYDIESNTWSVETQIPAPKFYSGVTAMGRTIFFVGGLDSTESIDRASAETMAYDLDSKEWWREKDSWDSPNDVWESTCVAIYVPMCDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00561833;
90% Identity
iTF_00596721;
80% Identity
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